RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 SPINK6Q6UWN8 80 aa8.86□□□□□ -0.99
RBM39-245ENST00000639702 MED12LQ86YW9 2145 aa8.85□□□□□ -0.99
RBM39-245ENST00000639702 COL5A1P20908 1838 aaPredicted RBP8.85□□□□□ -0.99
RBM39-245ENST00000639702 IGLV9-49A0A0B4J1Y8 123 aa8.85□□□□□ -0.99
RBM39-245ENST00000639702 FAM19A3Q7Z5A8 133 aa8.85□□□□□ -0.99
RBM39-245ENST00000639702 HIVEP2P31629 2446 aa8.85□□□□□ -0.99
RBM39-245ENST00000639702 FREM1Q5H8C1 2179 aa8.85□□□□□ -0.99
RBM39-245ENST00000639702 BRK1Q8WUW1 75 aa8.85□□□□□ -0.99
RBM39-245ENST00000639702 NBASA2RRP1 2371 aa8.85□□□□□ -0.99
RBM39-245ENST00000639702 HRCT1Q6UXD1 115 aa8.84□□□□□ -0.99
RBM39-245ENST00000639702 M0QXV9 152 aa8.84□□□□□ -0.99
RBM39-245ENST00000639702 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
RBM39-245ENST00000639702 PCDH15Q96QU1 1955 aa8.84□□□□□ -0.99
RBM39-245ENST00000639702 MUC6Q6W4X9 2439 aa8.84□□□□□ -0.99
RBM39-245ENST00000639702 C2orf91Q6ZV80 131 aa8.84□□□□□ -0.99
RBM39-245ENST00000639702 PRM2P04554 102 aa8.83□□□□□ -1
RBM39-245ENST00000639702 LINC00242Q5T6M2 205 aa8.83□□□□□ -1
RBM39-245ENST00000639702 ZFHX2Q9C0A1 2572 aaPredicted RBP8.83□□□□□ -1
RBM39-245ENST00000639702 REG3GQ6UW15 175 aa8.83□□□□□ -1
RBM39-245ENST00000639702 SERP2Q8N6R1 65 aa8.83□□□□□ -1
RBM39-245ENST00000639702 CSDC2Q9Y534 153 aaKnown RBP8.82□□□□□ -1
RBM39-245ENST00000639702 KRTAP10-9P60411 292 aa8.82□□□□□ -1
RBM39-245ENST00000639702 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
RBM39-245ENST00000639702 SMR3AQ99954 134 aa8.82□□□□□ -1
RBM39-245ENST00000639702 POM121L12Q8N7R1 296 aa8.82□□□□□ -1
RBM39-245ENST00000639702 FHL2Q14192 279 aa8.82□□□□□ -1
RBM39-245ENST00000639702 Q8N9L7 120 aa8.82□□□□□ -1
RBM39-245ENST00000639702 FAM240AA0A1B0GVK7 77 aa8.81□□□□□ -1
RBM39-245ENST00000639702 COX8CQ7Z4L0 72 aa8.81□□□□□ -1
RBM39-245ENST00000639702 SERP1Q9Y6X1 66 aa8.81□□□□□ -1
RBM39-245ENST00000639702 KIAA1549Q9HCM3 1950 aa8.81□□□□□ -1
RBM39-245ENST00000639702 Q6JHZ5 121 aa8.81□□□□□ -1
RBM39-245ENST00000639702 SVIPQ8NHG7 77 aa8.81□□□□□ -1
RBM39-245ENST00000639702 IGLV5-52A0A0A0MRZ9 124 aa8.81□□□□□ -1
RBM39-245ENST00000639702 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
RBM39-245ENST00000639702 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
RBM39-245ENST00000639702 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
RBM39-245ENST00000639702 EDN2P20800 178 aa8.79□□□□□ -1
RBM39-245ENST00000639702 GAS8-AS1O95177 125 aa8.79□□□□□ -1
RBM39-245ENST00000639702 BEAN1Q3B7T3 259 aa8.79□□□□□ -1
RBM39-245ENST00000639702 UNQ6190/PRO20217Q6UXQ8 127 aa8.79□□□□□ -1
RBM39-245ENST00000639702 RETNQ9HD89 108 aa8.79□□□□□ -1
RBM39-245ENST00000639702 C2orf48Q96LS8 159 aa8.78□□□□□ -1
RBM39-245ENST00000639702 ATG2AQ2TAZ0 1938 aa8.78□□□□□ -1
RBM39-245ENST00000639702 NOTCH3Q9UM47 2321 aa8.78□□□□□ -1
RBM39-245ENST00000639702 NHLRC4P0CG21 123 aaPredicted RBP8.77□□□□□ -1
RBM39-245ENST00000639702 NTM-AS1Q6ZSK4 140 aa8.77□□□□□ -1
RBM39-245ENST00000639702 Q8N814 137 aa8.77□□□□□ -1
RBM39-245ENST00000639702 CREBBPQ92793 2442 aa8.77□□□□□ -1.01
RBM39-245ENST00000639702 A0A1B0GUV1 79 aa8.77□□□□□ -1.01
RBM39-245ENST00000639702 Q6ZTC4 211 aa8.77□□□□□ -1.01
RBM39-245ENST00000639702 C6orf223Q8N319 242 aa8.76□□□□□ -1.01
RBM39-245ENST00000639702 AMELXQ99217 191 aa8.76□□□□□ -1.01
RBM39-245ENST00000639702 PRYO14603 147 aa8.76□□□□□ -1.01
RBM39-245ENST00000639702 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
RBM39-245ENST00000639702 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
RBM39-245ENST00000639702 FAM208BQ5VWN6 2430 aa8.75□□□□□ -1.01
RBM39-245ENST00000639702 MED13LQ71F56 2210 aa8.75□□□□□ -1.01
RBM39-245ENST00000639702 COX6A2Q02221 97 aa8.75□□□□□ -1.01
RBM39-245ENST00000639702 IGLV4-60A0A075B6I1 120 aa8.75□□□□□ -1.01
RBM39-245ENST00000639702 C1orf134Q5TEV5 83 aa8.75□□□□□ -1.01
RBM39-245ENST00000639702 PCNX3Q9H6A9 2034 aa8.74□□□□□ -1.01
RBM39-245ENST00000639702 COX7CP15954 63 aa8.74□□□□□ -1.01
RBM39-245ENST00000639702 FAM30AQ9NZY2 134 aa8.73□□□□□ -1.01
RBM39-245ENST00000639702 SNURFQ9Y675 71 aa8.73□□□□□ -1.01
RBM39-245ENST00000639702 LYPD5Q6UWN5 251 aa8.73□□□□□ -1.01
RBM39-245ENST00000639702 PTPRQQ9UMZ3 2332 aa8.72□□□□□ -1.01
RBM39-245ENST00000639702 CIRBP-AS1Q8TBR5 109 aa8.72□□□□□ -1.01
RBM39-245ENST00000639702 FSHBP01225 129 aa8.72□□□□□ -1.01
RBM39-245ENST00000639702 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
RBM39-245ENST00000639702 A0A1W2PPR1 153 aa8.72□□□□□ -1.01
RBM39-245ENST00000639702 PTPRSQ13332 1948 aa8.71□□□□□ -1.01
RBM39-245ENST00000639702 ESRGQ1W209 222 aa8.71□□□□□ -1.01
RBM39-245ENST00000639702 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.01
RBM39-245ENST00000639702 Q6Q795 121 aa8.71□□□□□ -1.01
RBM39-245ENST00000639702 Q6ZVQ6 151 aa8.71□□□□□ -1.02
RBM39-245ENST00000639702 Q8N2B8 174 aa8.71□□□□□ -1.02
RBM39-245ENST00000639702 ANKHD1Q8IWZ3 2542 aaKnown RBP8.71□□□□□ -1.02
RBM39-245ENST00000639702 TRAV7A0A075B6U4 112 aa8.7□□□□□ -1.02
RBM39-245ENST00000639702 URB1-AS1Q96HZ7 61 aa8.7□□□□□ -1.02
RBM39-245ENST00000639702 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
RBM39-245ENST00000639702 Q9BRP9 147 aa8.69□□□□□ -1.02
RBM39-245ENST00000639702 RAI1Q7Z5J4 1906 aaPredicted RBP8.68□□□□□ -1.02
RBM39-245ENST00000639702 CPAMD8Q8IZJ3 1885 aa8.68□□□□□ -1.02
RBM39-245ENST00000639702 A0A087WYN8 130 aa8.67□□□□□ -1.02
RBM39-245ENST00000639702 A6NED7 52 aa8.67□□□□□ -1.02
RBM39-245ENST00000639702 ADAMTS20P59510 1910 aa8.67□□□□□ -1.02
RBM39-245ENST00000639702 TNCP24821 2201 aa8.67□□□□□ -1.02
RBM39-245ENST00000639702 TSPEAR-AS2P59090 65 aa8.67□□□□□ -1.02
RBM39-245ENST00000639702 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
RBM39-245ENST00000639702 HCFC1P51610 2035 aa8.66□□□□□ -1.02
RBM39-245ENST00000639702 Q6ZSN1 163 aa8.66□□□□□ -1.02
RBM39-245ENST00000639702 FHL3Q13643 280 aa8.66□□□□□ -1.02
RBM39-245ENST00000639702 LINC00310P59036 64 aa8.65□□□□□ -1.02
RBM39-245ENST00000639702 IGHV6-1A0A0B4J1U7 121 aa8.65□□□□□ -1.02
RBM39-245ENST00000639702 PLCE1Q9P212 2302 aa8.65□□□□□ -1.03
RBM39-245ENST00000639702 DSCAML1Q8TD84 2053 aa8.64□□□□□ -1.03
RBM39-245ENST00000639702 XGP55808 180 aa8.64□□□□□ -1.03
RBM39-245ENST00000639702 ADAMTSL4-AS1Q5T5F5 129 aa8.64□□□□□ -1.03
RBM39-245ENST00000639702 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms