RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	CT83	Q5H943	113 aa		6.76	□□□□□ -1.33
PAX6-238	ENST00000638755	ANAPC11	Q9NYG5	84 aa		6.76	□□□□□ -1.33
PAX6-238	ENST00000638755	HIGD1C	A8MV81	97 aa		6.75	□□□□□ -1.33
PAX6-238	ENST00000638755	TRGC1	P0CF51	173 aa		6.75	□□□□□ -1.33
PAX6-238	ENST00000638755	SPAG11B	Q08648	103 aa		6.75	□□□□□ -1.33
PAX6-238	ENST00000638755	LINC00304	Q8N9R0	145 aa		6.75	□□□□□ -1.33
PAX6-238	ENST00000638755	IMMP2L	Q96T52	175 aa		6.75	□□□□□ -1.33
PAX6-238	ENST00000638755	TSHB	P01222	138 aa		6.74	□□□□□ -1.33
PAX6-238	ENST00000638755	C5orf38	Q86SI9	138 aa		6.74	□□□□□ -1.33
PAX6-238	ENST00000638755	LINC00337	Q8N6G1	96 aa		6.74	□□□□□ -1.33
PAX6-238	ENST00000638755	GATD1	Q8NB37	220 aa		6.74	□□□□□ -1.33
PAX6-238	ENST00000638755	RPL39L	Q96EH5	51 aa	Known RBP	6.74	□□□□□ -1.33
PAX6-238	ENST00000638755	CDC42SE2	Q9NRR3	84 aa		6.74	□□□□□ -1.33
PAX6-238	ENST00000638755	KRTAP13-2	Q52LG2	175 aa		6.73	□□□□□ -1.33
PAX6-238	ENST00000638755	LCE2C	Q5TA81	110 aa		6.73	□□□□□ -1.33
PAX6-238	ENST00000638755		A0A1B0GUT8	65 aa		6.72	□□□□□ -1.33
PAX6-238	ENST00000638755	C1orf196	B1AJZ1	125 aa		6.72	□□□□□ -1.33
PAX6-238	ENST00000638755	CFC1B	P0CG36	223 aa		6.72	□□□□□ -1.33
PAX6-238	ENST00000638755	MRPL35	Q9NZE8	188 aa	Known RBP	6.72	□□□□□ -1.33
PAX6-238	ENST00000638755	SMIM27	A0A1W2PRY6	76 aa		6.71	□□□□□ -1.34
PAX6-238	ENST00000638755	SDHAF1	A6NFY7	115 aa		6.71	□□□□□ -1.34
PAX6-238	ENST00000638755	ADCYAP1	P18509	176 aa		6.71	□□□□□ -1.34
PAX6-238	ENST00000638755	PMCH	P20382	165 aa		6.71	□□□□□ -1.34
PAX6-238	ENST00000638755	C10orf25	Q5T742	122 aa		6.71	□□□□□ -1.34
PAX6-238	ENST00000638755	BORCS7	Q96B45	105 aa		6.71	□□□□□ -1.34
PAX6-238	ENST00000638755	CTDSP1	Q9GZU7	261 aa		6.71	□□□□□ -1.34
PAX6-238	ENST00000638755	TRAV13-1	A0A0B4J241	112 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	SMKR1	H3BMG3	65 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	NDUFA1	O15239	70 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	SEC61B	P60468	96 aa	Known RBP	6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	MT1H	P80294	61 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	RNASE13	Q5GAN3	156 aa	Known RBP	6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	UNQ6190/PRO20217	Q6UXQ8	127 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	SMIM15	Q7Z3B0	74 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	COMMD7	Q86VX2	200 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	AMN1	Q8IY45	258 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	MRAP2	Q96G30	205 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	NAT8B	Q9UHF3	227 aa		6.7	□□□□□ -1.34
PAX6-238	ENST00000638755	TMEM218	A2RU14	115 aa		6.69	□□□□□ -1.34
PAX6-238	ENST00000638755		I3L3M4	83 aa		6.69	□□□□□ -1.34
PAX6-238	ENST00000638755	TLX1NB	P0CAT3	122 aa		6.69	□□□□□ -1.34
PAX6-238	ENST00000638755	RIG	Q13278	110 aa		6.69	□□□□□ -1.34
PAX6-238	ENST00000638755	MRPL54	Q6P161	138 aa	Known RBP	6.69	□□□□□ -1.34
PAX6-238	ENST00000638755	OR10D4P	Q8NGN7	298 aa		6.69	□□□□□ -1.34
PAX6-238	ENST00000638755	ORAOV1	Q8WV07	137 aa		6.69	□□□□□ -1.34
PAX6-238	ENST00000638755	TMEM191A	Q9H0A3	160 aa		6.69	□□□□□ -1.34
PAX6-238	ENST00000638755	C6orf48	Q9UBA6	75 aa		6.69	□□□□□ -1.34
PAX6-238	ENST00000638755	NUPR1	O60356	82 aa		6.68	□□□□□ -1.34
PAX6-238	ENST00000638755	RAB4A	P20338	218 aa		6.68	□□□□□ -1.34
PAX6-238	ENST00000638755	LOR	P23490	312 aa	Predicted RBP	6.68	□□□□□ -1.34
PAX6-238	ENST00000638755	RPL28	P46779	137 aa	Known RBP	6.68	□□□□□ -1.34
PAX6-238	ENST00000638755	MRPL52	Q86TS9	123 aa	Known RBP	6.68	□□□□□ -1.34
PAX6-238	ENST00000638755	TMEM242	Q9NWH2	141 aa		6.68	□□□□□ -1.34
PAX6-238	ENST00000638755		F8W036	122 aa		6.67	□□□□□ -1.34
PAX6-238	ENST00000638755	SMCP	P49901	116 aa	Predicted RBP	6.67	□□□□□ -1.34
PAX6-238	ENST00000638755	UQCC3	Q6UW78	93 aa		6.67	□□□□□ -1.34
PAX6-238	ENST00000638755		A0A1B0GXF2	115 aa		6.66	□□□□□ -1.34
PAX6-238	ENST00000638755	LINC00862	A6NCI5	91 aa		6.66	□□□□□ -1.34
PAX6-238	ENST00000638755	KRTAP10-6	P60371	365 aa	Predicted RBP	6.66	□□□□□ -1.34
PAX6-238	ENST00000638755	PNRC1	Q12796	327 aa	Predicted RBP	6.66	□□□□□ -1.34
PAX6-238	ENST00000638755	KRTAP13-3	Q3SY46	172 aa		6.66	□□□□□ -1.34
PAX6-238	ENST00000638755	MRPL51	Q4U2R6	128 aa	Known RBP	6.66	□□□□□ -1.34
PAX6-238	ENST00000638755	C9orf129	Q5T035	196 aa	Known RBP	6.66	□□□□□ -1.34
PAX6-238	ENST00000638755		F8WDY8	70 aa		6.65	□□□□□ -1.34
PAX6-238	ENST00000638755	PPP1R2P9	O14990	202 aa		6.65	□□□□□ -1.34
PAX6-238	ENST00000638755	MT-ND4L	P03901	98 aa		6.65	□□□□□ -1.34
PAX6-238	ENST00000638755	LINC00242	Q5T6M2	205 aa		6.65	□□□□□ -1.34
PAX6-238	ENST00000638755	FAM104B	Q5XKR9	115 aa		6.65	□□□□□ -1.34
PAX6-238	ENST00000638755	IGKV2D-26	A0A0A0MRZ7	120 aa		6.64	□□□□□ -1.35
PAX6-238	ENST00000638755	TRBV6-5	A0A0K0K1A5	114 aa		6.64	□□□□□ -1.35
PAX6-238	ENST00000638755	HBB	P68871	147 aa		6.64	□□□□□ -1.35
PAX6-238	ENST00000638755	NRAC	Q8N912	160 aa		6.64	□□□□□ -1.35
PAX6-238	ENST00000638755	ANAPC16	Q96DE5	110 aa		6.64	□□□□□ -1.35
PAX6-238	ENST00000638755	SSPO	A2VEC9	5147 aa		6.64	□□□□□ -1.35
PAX6-238	ENST00000638755	C7orf77	A4D0Y5	90 aa		6.63	□□□□□ -1.35
PAX6-238	ENST00000638755	BCE1	O60756	84 aa		6.63	□□□□□ -1.35
PAX6-238	ENST00000638755	POLR2K	P53803	58 aa	Known RBP	6.63	□□□□□ -1.35
PAX6-238	ENST00000638755	KRTAP19-2	Q3LHN2	52 aa		6.63	□□□□□ -1.35
PAX6-238	ENST00000638755	SEC11C	Q9BY50	192 aa		6.63	□□□□□ -1.35
PAX6-238	ENST00000638755	ST20	Q9HBF5	79 aa		6.63	□□□□□ -1.35
PAX6-238	ENST00000638755	C22orf24	Q9Y442	160 aa		6.63	□□□□□ -1.35
PAX6-238	ENST00000638755		A0A1B0GW15	77 aa		6.62	□□□□□ -1.35
PAX6-238	ENST00000638755	FAM229B	Q4G0N7	80 aa		6.62	□□□□□ -1.35
PAX6-238	ENST00000638755	FP248	Q71RG6	208 aa	Predicted RBP	6.62	□□□□□ -1.35
PAX6-238	ENST00000638755	USH2A	O75445	5202 aa		6.62	□□□□□ -1.35
PAX6-238	ENST00000638755		D6R8Y8	96 aa		6.61	□□□□□ -1.35
PAX6-238	ENST00000638755	NDUFC2-KCTD14	E9PQ53	114 aa		6.61	□□□□□ -1.35
PAX6-238	ENST00000638755	CKS2	P33552	79 aa		6.61	□□□□□ -1.35
PAX6-238	ENST00000638755	CTAG1A	P78358	180 aa		6.61	□□□□□ -1.35
PAX6-238	ENST00000638755	LBH	Q53QV2	105 aa	Predicted RBP	6.61	□□□□□ -1.35
PAX6-238	ENST00000638755	C10orf91	Q5T1B1	145 aa		6.61	□□□□□ -1.35
PAX6-238	ENST00000638755	TRBV27	A0A0K0K1C4	114 aa		6.6	□□□□□ -1.35
PAX6-238	ENST00000638755	TNFRSF6B	O95407	300 aa		6.6	□□□□□ -1.35
PAX6-238	ENST00000638755	NPY	P01303	97 aa		6.6	□□□□□ -1.35
PAX6-238	ENST00000638755	S100A8	P05109	93 aa		6.6	□□□□□ -1.35
PAX6-238	ENST00000638755	SUMO2	P61956	95 aa	Known RBP	6.6	□□□□□ -1.35
PAX6-238	ENST00000638755		Q6ZUT4	128 aa		6.6	□□□□□ -1.35
PAX6-238	ENST00000638755	ATP5L2	Q7Z4Y8	100 aa		6.6	□□□□□ -1.35
PAX6-238	ENST00000638755	UBE2D4	Q9Y2X8	147 aa		6.6	□□□□□ -1.35
PAX6-238	ENST00000638755	VCY	O14598	125 aa		6.59	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms