RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 NPC2P61916 151 aa15.1■□□□□ 0.01
CLN6-224ENST00000638076 DEFB135Q30KP9 77 aa15.1■□□□□ 0.01
CLN6-224ENST00000638076 G3V4G9 280 aa15.09■□□□□ 0.01
CLN6-224ENST00000638076 CHCHD5Q9BSY4 110 aa15.09■□□□□ 0.01
CLN6-224ENST00000638076 F5H768 121 aa15.09■□□□□ 0.01
CLN6-224ENST00000638076 Q9H8V8 135 aa15.09■□□□□ 0.01
CLN6-224ENST00000638076 ERG28Q9UKR5 140 aa15.09■□□□□ 0.01
CLN6-224ENST00000638076 TEX48A0A1B0GUV7 120 aa15.08■□□□□ 0
CLN6-224ENST00000638076 TIMM17BO60830 172 aa15.08■□□□□ 0
CLN6-224ENST00000638076 GYPEP15421 78 aa15.08■□□□□ 0
CLN6-224ENST00000638076 FAM222AQ5U5X8 452 aa15.08■□□□□ 0
CLN6-224ENST00000638076 IGLV4-60A0A075B6I1 120 aa15.08■□□□□ 0
CLN6-224ENST00000638076 H7C2G1 150 aa15.08■□□□□ 0
CLN6-224ENST00000638076 TCL1BO95988 128 aa15.07■□□□□ 0
CLN6-224ENST00000638076 SCGB1C2P0DMR2 95 aa15.07■□□□□ 0
CLN6-224ENST00000638076 NBEAL2Q6ZNJ1 2754 aa15.06■□□□□ 0
CLN6-224ENST00000638076 APOC4P55056 127 aa15.06■□□□□ 0
CLN6-224ENST00000638076 DAND5Q8N907 189 aa15.06■□□□□ 0
CLN6-224ENST00000638076 IGKV3OR2-268A0A0C4DH90 116 aa15.06■□□□□ 0
CLN6-224ENST00000638076 DEFB4AO15263 64 aa15.05■□□□□ 0
CLN6-224ENST00000638076 ETDBQ3ZM63 59 aa15.05■□□□□ 0
CLN6-224ENST00000638076 SH2D6Q7Z4S9 175 aa15.05■□□□□ 0
CLN6-224ENST00000638076 ATP6V0E2Q8NHE4 81 aa15.05■□□□□ 0
CLN6-224ENST00000638076 ZNF625Q96I27 306 aaPredicted RBP15.05■□□□□ 0
CLN6-224ENST00000638076 CIRBPQ14011 172 aaKnown RBP15.05■□□□□ -0
CLN6-224ENST00000638076 TRBV20-1A0A075B6N2 111 aa15.04■□□□□ -0
CLN6-224ENST00000638076 LYRM9A8MSI8 78 aa15.04■□□□□ -0
CLN6-224ENST00000638076 PRO0255Q9UI72 69 aa15.04■□□□□ -0
CLN6-224ENST00000638076 Q1RN00 199 aa15.04■□□□□ -0
CLN6-224ENST00000638076 TRRAPQ9Y4A5 3859 aa15.03■□□□□ -0
CLN6-224ENST00000638076 IFITM1P13164 125 aa15.03■□□□□ -0
CLN6-224ENST00000638076 WFDC9Q8NEX5 89 aa15.03■□□□□ -0
CLN6-224ENST00000638076 ATRQ13535 2644 aa15.03■□□□□ -0
CLN6-224ENST00000638076 PRIMA1Q86XR5 153 aa15.01□□□□□ -0.01
CLN6-224ENST00000638076 IGHV4-28A0A0C4DH34 117 aa15.01□□□□□ -0.01
CLN6-224ENST00000638076 SMCPP49901 116 aaPredicted RBP15.01□□□□□ -0.01
CLN6-224ENST00000638076 TEP1Q99973 2627 aaKnown RBP15.01□□□□□ -0.01
CLN6-224ENST00000638076 A0A0U1RRA0 63 aa15□□□□□ -0.01
CLN6-224ENST00000638076 A0A096LPF7 62 aa15□□□□□ -0.01
CLN6-224ENST00000638076 RNF183Q96D59 192 aa15□□□□□ -0.01
CLN6-224ENST00000638076 PAX4O43316 350 aa14.99□□□□□ -0.01
CLN6-224ENST00000638076 MEIG1Q5JSS6 88 aa14.98□□□□□ -0.01
CLN6-224ENST00000638076 TMEM262E9PQX1 116 aa14.97□□□□□ -0.01
CLN6-224ENST00000638076 LINC00308Q8TCZ7 52 aa14.97□□□□□ -0.01
CLN6-224ENST00000638076 HERV-K104P63124 156 aa14.97□□□□□ -0.01
CLN6-224ENST00000638076 IGHV3OR16-9A0A0B4J2B5 98 aa14.96□□□□□ -0.01
CLN6-224ENST00000638076 WIPF1O43516 503 aa14.96□□□□□ -0.01
CLN6-224ENST00000638076 DAD1P61803 113 aa14.96□□□□□ -0.01
CLN6-224ENST00000638076 Q8NAQ8 132 aa14.96□□□□□ -0.01
CLN6-224ENST00000638076 TRBV30A0A0K0K1B3 111 aa14.95□□□□□ -0.02
CLN6-224ENST00000638076 IGHV4-30-4P0DP06 118 aa14.95□□□□□ -0.02
CLN6-224ENST00000638076 TRIAP1O43715 76 aa14.95□□□□□ -0.02
CLN6-224ENST00000638076 COX7B2Q8TF08 81 aa14.95□□□□□ -0.02
CLN6-224ENST00000638076 CELA1Q9UNI1 258 aa14.95□□□□□ -0.02
CLN6-224ENST00000638076 MIFP14174 115 aa14.94□□□□□ -0.02
CLN6-224ENST00000638076 LINC00959A0A1B0GUT2 108 aa14.94□□□□□ -0.02
CLN6-224ENST00000638076 TOMM7Q9P0U1 55 aa14.94□□□□□ -0.02
CLN6-224ENST00000638076 ICOSQ9Y6W8 199 aa14.94□□□□□ -0.02
CLN6-224ENST00000638076 A0A1B0GUV1 79 aa14.93□□□□□ -0.02
CLN6-224ENST00000638076 J3QR89 54 aa14.92□□□□□ -0.02
CLN6-224ENST00000638076 SOSTDC1Q6X4U4 206 aa14.92□□□□□ -0.02
CLN6-224ENST00000638076 A0A087WZ39 114 aa14.91□□□□□ -0.02
CLN6-224ENST00000638076 RPL13AP40429 203 aaKnown RBP14.91□□□□□ -0.02
CLN6-224ENST00000638076 C5orf38Q86SI9 138 aa14.91□□□□□ -0.02
CLN6-224ENST00000638076 COPS9Q8WXC6 57 aa14.91□□□□□ -0.02
CLN6-224ENST00000638076 ATP5G1P05496 136 aa14.9□□□□□ -0.02
CLN6-224ENST00000638076 ATXN8Q156A1 80 aa14.89□□□□□ -0.03
CLN6-224ENST00000638076 TRAV26-1A0A087WT03 109 aa14.88□□□□□ -0.03
CLN6-224ENST00000638076 C9JAW5 83 aa14.88□□□□□ -0.03
CLN6-224ENST00000638076 CLPSL2Q6UWE3 100 aa14.88□□□□□ -0.03
CLN6-224ENST00000638076 SPART-AS1P0CW21 52 aa14.88□□□□□ -0.03
CLN6-224ENST00000638076 FOXI1Q12951 378 aa14.88□□□□□ -0.03
CLN6-224ENST00000638076 F8P00451 2351 aa14.88□□□□□ -0.03
CLN6-224ENST00000638076 XCL1P47992 114 aa14.87□□□□□ -0.03
CLN6-224ENST00000638076 SLC25A20O43772 301 aa14.87□□□□□ -0.03
CLN6-224ENST00000638076 SS18Q15532 418 aa14.87□□□□□ -0.03
CLN6-224ENST00000638076 OXLD1Q5BKU9 147 aa14.87□□□□□ -0.03
CLN6-224ENST00000638076 COX6CP09669 75 aa14.86□□□□□ -0.03
CLN6-224ENST00000638076 TEN1Q86WV5 123 aa14.86□□□□□ -0.03
CLN6-224ENST00000638076 HTN3P15516 51 aa14.85□□□□□ -0.03
CLN6-224ENST00000638076 LINC01620Q4KN68 170 aa14.85□□□□□ -0.03
CLN6-224ENST00000638076 SCGB1A1P11684 91 aa14.84□□□□□ -0.03
CLN6-224ENST00000638076 KRTAP24-1Q3LI83 254 aa14.83□□□□□ -0.04
CLN6-224ENST00000638076 MIR7-3HGQ8N6C7 128 aa14.83□□□□□ -0.04
CLN6-224ENST00000638076 ANKRD29Q8N6D5 301 aa14.83□□□□□ -0.04
CLN6-224ENST00000638076 LINC00269Q8N2A0 174 aa14.82□□□□□ -0.04
CLN6-224ENST00000638076 Q8N3U1 123 aa14.82□□□□□ -0.04
CLN6-224ENST00000638076 PPDPFQ9H3Y8 114 aa14.82□□□□□ -0.04
CLN6-224ENST00000638076 KRTAP10-11P60412 298 aa14.81□□□□□ -0.04
CLN6-224ENST00000638076 PPDPFLQ8WWR9 84 aa14.81□□□□□ -0.04
CLN6-224ENST00000638076 CLEC2BQ92478 149 aa14.81□□□□□ -0.04
CLN6-224ENST00000638076 CARD19Q96LW7 228 aa14.81□□□□□ -0.04
CLN6-224ENST00000638076 LINC00158P58513 81 aa14.81□□□□□ -0.04
CLN6-224ENST00000638076 MRPL23Q16540 153 aaKnown RBP14.8□□□□□ -0.04
CLN6-224ENST00000638076 M0QXV9 152 aa14.8□□□□□ -0.04
CLN6-224ENST00000638076 C6orf226Q5I0X4 101 aa14.8□□□□□ -0.04
CLN6-224ENST00000638076 C11orf68Q9H3H3 251 aaKnown RBP14.8□□□□□ -0.04
CLN6-224ENST00000638076 GAGE12HA6NDE8 117 aa14.79□□□□□ -0.04
CLN6-224ENST00000638076 ANGP03950 147 aaKnown RBP14.79□□□□□ -0.04
CLN6-224ENST00000638076 IBA57-AS1B1ANH7 110 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms