RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	IGKV2D-26	A0A0A0MRZ7	120 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	LEPROT	O15243	131 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	CRP	P02741	224 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	COX8A	P10176	69 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	NMU	P48645	174 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	MIA	Q16674	131 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	ZFAND6	Q6FIF0	208 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	UBE2DNL	Q8IWF7	75 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	C14orf144	Q96I85	54 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823		Q9H8V8	135 aa		7.96	□□□□□ -1.14
CLN6-223	ENST00000637823	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.95	□□□□□ -1.14
CLN6-223	ENST00000637823		K7EP13	123 aa		7.95	□□□□□ -1.14
CLN6-223	ENST00000637823	SLC25A34	Q6PIV7	304 aa		7.95	□□□□□ -1.14
CLN6-223	ENST00000637823	CD164L2	Q6UWJ8	174 aa		7.95	□□□□□ -1.14
CLN6-223	ENST00000637823	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.95	□□□□□ -1.14
CLN6-223	ENST00000637823	UBE2W	Q96B02	151 aa		7.95	□□□□□ -1.14
CLN6-223	ENST00000637823	PLEKHB2	Q96CS7	222 aa		7.95	□□□□□ -1.14
CLN6-223	ENST00000637823	MIEN1	Q9BRT3	115 aa		7.95	□□□□□ -1.14
CLN6-223	ENST00000637823	UQCR10	Q9UDW1	63 aa		7.95	□□□□□ -1.14
CLN6-223	ENST00000637823		A0A087WZ39	114 aa		7.94	□□□□□ -1.14
CLN6-223	ENST00000637823	IGHV1-58	A0A0C4DH39	117 aa		7.94	□□□□□ -1.14
CLN6-223	ENST00000637823	DLEU1	O43261	78 aa		7.94	□□□□□ -1.14
CLN6-223	ENST00000637823	SPINK8	P0C7L1	97 aa		7.94	□□□□□ -1.14
CLN6-223	ENST00000637823	XCL1	P47992	114 aa		7.94	□□□□□ -1.14
CLN6-223	ENST00000637823	LINC01561	Q8N1V8	128 aa		7.94	□□□□□ -1.14
CLN6-223	ENST00000637823	C10orf126	Q8N4M7	172 aa		7.94	□□□□□ -1.14
CLN6-223	ENST00000637823	TENM2	Q9NT68	2774 aa		7.94	□□□□□ -1.14
CLN6-223	ENST00000637823	IGLV10-54	A0A075B6I4	117 aa		7.93	□□□□□ -1.14
CLN6-223	ENST00000637823	IBA57-AS1	B1ANH7	110 aa		7.93	□□□□□ -1.14
CLN6-223	ENST00000637823		J3QQQ9	107 aa		7.93	□□□□□ -1.14
CLN6-223	ENST00000637823	PCP2	Q8IVA1	136 aa		7.93	□□□□□ -1.14
CLN6-223	ENST00000637823	BOD1L2	Q8IYS8	172 aa		7.93	□□□□□ -1.14
CLN6-223	ENST00000637823	CSMD3	Q7Z407	3707 aa		7.92	□□□□□ -1.14
CLN6-223	ENST00000637823	IGHV3-64	A0A075B6Q5	118 aa		7.92	□□□□□ -1.14
CLN6-223	ENST00000637823	TRAV8-3	A0A0A6YYJ7	113 aa		7.92	□□□□□ -1.14
CLN6-223	ENST00000637823	IGLV5-39	A0A0G2JS06	123 aa		7.92	□□□□□ -1.14
CLN6-223	ENST00000637823	GAGE12H	A6NDE8	117 aa		7.92	□□□□□ -1.14
CLN6-223	ENST00000637823	SMIM1	B2RUZ4	78 aa		7.92	□□□□□ -1.14
CLN6-223	ENST00000637823	LGALS3	P17931	250 aa	Known RBP	7.92	□□□□□ -1.14
CLN6-223	ENST00000637823	C5orf38	Q86SI9	138 aa		7.92	□□□□□ -1.14
CLN6-223	ENST00000637823	PCP4L1	A6NKN8	68 aa		7.91	□□□□□ -1.14
CLN6-223	ENST00000637823	COX7A2L	O14548	114 aa		7.91	□□□□□ -1.14
CLN6-223	ENST00000637823	FOXI1	Q12951	378 aa		7.91	□□□□□ -1.14
CLN6-223	ENST00000637823	MAPKAPK5-AS1	Q8N8E1	139 aa		7.91	□□□□□ -1.14
CLN6-223	ENST00000637823	MYMX	A0A1B0GTQ4	84 aa		7.9	□□□□□ -1.14
CLN6-223	ENST00000637823	C3orf84	H3BNL1	204 aa		7.9	□□□□□ -1.14
CLN6-223	ENST00000637823	DDT	P30046	118 aa		7.9	□□□□□ -1.14
CLN6-223	ENST00000637823	TSPEAR-AS2	P59090	65 aa		7.9	□□□□□ -1.14
CLN6-223	ENST00000637823	C4orf48	Q5BLP8	95 aa		7.9	□□□□□ -1.14
CLN6-223	ENST00000637823	TTTY13	Q9BZ97	58 aa		7.9	□□□□□ -1.14
CLN6-223	ENST00000637823	ZNF815P	A8K554	130 aa		7.89	□□□□□ -1.15
CLN6-223	ENST00000637823	MAL	P21145	153 aa		7.89	□□□□□ -1.15
CLN6-223	ENST00000637823	KRTAP26-1	Q6PEX3	210 aa		7.89	□□□□□ -1.15
CLN6-223	ENST00000637823	RMI2	Q96E14	147 aa		7.89	□□□□□ -1.15
CLN6-223	ENST00000637823	C1orf43	Q9BWL3	253 aa		7.89	□□□□□ -1.15
CLN6-223	ENST00000637823	IGKV2D-24	A0A075B6R9	120 aa		7.88	□□□□□ -1.15
CLN6-223	ENST00000637823	APOM	O95445	188 aa		7.88	□□□□□ -1.15
CLN6-223	ENST00000637823	HNRNPA3	P51991	378 aa	Known RBP	7.88	□□□□□ -1.15
CLN6-223	ENST00000637823	COX7B2	Q8TF08	81 aa		7.88	□□□□□ -1.15
CLN6-223	ENST00000637823	TTC32	Q5I0X7	151 aa		7.87	□□□□□ -1.15
CLN6-223	ENST00000637823	CASC10	Q5T4H9	136 aa		7.87	□□□□□ -1.15
CLN6-223	ENST00000637823		Q9HAA7	133 aa		7.87	□□□□□ -1.15
CLN6-223	ENST00000637823	HIGD1B	Q9P298	99 aa		7.87	□□□□□ -1.15
CLN6-223	ENST00000637823	NDUFA12	Q9UI09	145 aa		7.87	□□□□□ -1.15
CLN6-223	ENST00000637823	NDUFA1	O15239	70 aa		7.86	□□□□□ -1.15
CLN6-223	ENST00000637823	C6orf226	Q5I0X4	101 aa		7.86	□□□□□ -1.15
CLN6-223	ENST00000637823	C2orf91	Q6ZV80	131 aa		7.86	□□□□□ -1.15
CLN6-223	ENST00000637823		Q8IZM0	81 aa		7.86	□□□□□ -1.15
CLN6-223	ENST00000637823	TOMM7	Q9P0U1	55 aa		7.86	□□□□□ -1.15
CLN6-223	ENST00000637823	TP73-AS1	Q9UF72	201 aa		7.86	□□□□□ -1.15
CLN6-223	ENST00000637823	COX11	Q9Y6N1	276 aa		7.86	□□□□□ -1.15
CLN6-223	ENST00000637823	NBDY	A0A0U1RRE5	68 aa		7.85	□□□□□ -1.15
CLN6-223	ENST00000637823	PRSS2	P07478	247 aa		7.85	□□□□□ -1.15
CLN6-223	ENST00000637823	SCGB1D4	Q6XE38	83 aa		7.85	□□□□□ -1.15
CLN6-223	ENST00000637823	ORAOV1	Q8WV07	137 aa		7.85	□□□□□ -1.15
CLN6-223	ENST00000637823	TM2D2	Q9BX73	214 aa		7.85	□□□□□ -1.15
CLN6-223	ENST00000637823	HERV-K104	P63124	156 aa		7.84	□□□□□ -1.15
CLN6-223	ENST00000637823	CTAG1A	P78358	180 aa		7.84	□□□□□ -1.15
CLN6-223	ENST00000637823	CFAP161	Q6P656	301 aa		7.84	□□□□□ -1.15
CLN6-223	ENST00000637823	SFTA2	Q6UW10	78 aa		7.84	□□□□□ -1.15
CLN6-223	ENST00000637823	ZNF625	Q96I27	306 aa	Predicted RBP	7.84	□□□□□ -1.15
CLN6-223	ENST00000637823	KRTAP1-5	Q9BYS1	174 aa		7.84	□□□□□ -1.15
CLN6-223	ENST00000637823	STARD9	Q9P2P6	4700 aa		7.84	□□□□□ -1.15
CLN6-223	ENST00000637823		A0A0J9YXY3	114 aa		7.83	□□□□□ -1.16
CLN6-223	ENST00000637823	KIAA0087	Q14695	138 aa		7.83	□□□□□ -1.16
CLN6-223	ENST00000637823	PLEC	Q15149	4684 aa	Known RBP	7.83	□□□□□ -1.16
CLN6-223	ENST00000637823	LINC00587	B1AMM8	73 aa		7.82	□□□□□ -1.16
CLN6-223	ENST00000637823	CXCL5	P42830	114 aa		7.82	□□□□□ -1.16
CLN6-223	ENST00000637823	VPS13D	Q5THJ4	4388 aa		7.82	□□□□□ -1.16
CLN6-223	ENST00000637823	TIMM17B	O60830	172 aa		7.81	□□□□□ -1.16
CLN6-223	ENST00000637823	CKS1B	P61024	79 aa		7.81	□□□□□ -1.16
CLN6-223	ENST00000637823	SPAG11B	Q08648	103 aa		7.81	□□□□□ -1.16
CLN6-223	ENST00000637823	CIRBP	Q14011	172 aa	Known RBP	7.81	□□□□□ -1.16
CLN6-223	ENST00000637823	TAL2	Q16559	108 aa		7.81	□□□□□ -1.16
CLN6-223	ENST00000637823		F8WDY8	70 aa		7.8	□□□□□ -1.16
CLN6-223	ENST00000637823	HSD52	Q0P140	79 aa		7.8	□□□□□ -1.16
CLN6-223	ENST00000637823	C15orf56	Q8N910	161 aa		7.8	□□□□□ -1.16
CLN6-223	ENST00000637823	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.8	□□□□□ -1.16
CLN6-223	ENST00000637823	TMEM238	C9JI98	176 aa		7.79	□□□□□ -1.16
CLN6-223	ENST00000637823	ZNF561-AS1	K7EIQ3	104 aa		7.79	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms