RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 MYO18BQ8IUG5 2567 aa7.6□□□□□ -1.19
PSPC1-207ENST00000635251 GIG44P09565 113 aaPredicted RBP7.59□□□□□ -1.19
PSPC1-207ENST00000635251 GAGE6Q13070 117 aa7.59□□□□□ -1.19
PSPC1-207ENST00000635251 TOMM7Q9P0U1 55 aa7.59□□□□□ -1.19
PSPC1-207ENST00000635251 MXRA5Q9NR99 2828 aa7.58□□□□□ -1.2
PSPC1-207ENST00000635251 TRBV6-4A0A1B0GX49 114 aa7.58□□□□□ -1.2
PSPC1-207ENST00000635251 PLAC8L1A1L4L8 177 aa7.58□□□□□ -1.2
PSPC1-207ENST00000635251 LINC01006Q8NI28 216 aa7.58□□□□□ -1.2
PSPC1-207ENST00000635251 TTC32Q5I0X7 151 aa7.58□□□□□ -1.2
PSPC1-207ENST00000635251 PLA2G2AP14555 144 aa7.57□□□□□ -1.2
PSPC1-207ENST00000635251 COX7B2Q8TF08 81 aa7.57□□□□□ -1.2
PSPC1-207ENST00000635251 CHCHD5Q9BSY4 110 aa7.57□□□□□ -1.2
PSPC1-207ENST00000635251 ZNF462Q96JM2 2506 aa7.56□□□□□ -1.2
PSPC1-207ENST00000635251 IGLV1-51P01701 117 aa7.56□□□□□ -1.2
PSPC1-207ENST00000635251 NAV2Q8IVL1 2488 aa7.56□□□□□ -1.2
PSPC1-207ENST00000635251 DEFB121Q5J5C9 76 aa7.55□□□□□ -1.2
PSPC1-207ENST00000635251 OVOL2Q9BRP0 275 aa7.55□□□□□ -1.2
PSPC1-207ENST00000635251 IGLV4-60A0A075B6I1 120 aa7.55□□□□□ -1.2
PSPC1-207ENST00000635251 FAM240AA0A1B0GVK7 77 aa7.55□□□□□ -1.2
PSPC1-207ENST00000635251 CRPP02741 224 aa7.55□□□□□ -1.2
PSPC1-207ENST00000635251 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
PSPC1-207ENST00000635251 MIR7-3HGQ8N6C7 128 aa7.55□□□□□ -1.2
PSPC1-207ENST00000635251 C19orf73Q9NVV2 129 aa7.55□□□□□ -1.2
PSPC1-207ENST00000635251 TEX15Q9BXT5 2789 aa7.55□□□□□ -1.2
PSPC1-207ENST00000635251 TRBV6-8A0A0A6YYG3 113 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 TRAV13-2A0A0B4J235 113 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 F8WDY8 70 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 LINC00158P58513 81 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 FHL2Q14192 279 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 MRPL23Q16540 153 aaKnown RBP7.54□□□□□ -1.2
PSPC1-207ENST00000635251 HIST2H2BCQ6DN03 193 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 Q6Q795 121 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 CSNK1G2-AS1Q8NCQ2 148 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 C16orf95Q9H693 158 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 SETXQ7Z333 2677 aaKnown RBP7.54□□□□□ -1.2
PSPC1-207ENST00000635251 TRACP01848 142 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
PSPC1-207ENST00000635251 PTPN13Q12923 2485 aa7.54□□□□□ -1.2
PSPC1-207ENST00000635251 GCN1Q92616 2671 aaKnown RBP7.53□□□□□ -1.2
PSPC1-207ENST00000635251 SND1-IT1Q9HBX3 110 aa7.53□□□□□ -1.2
PSPC1-207ENST00000635251 BAALC-AS2P0C853 105 aa7.53□□□□□ -1.2
PSPC1-207ENST00000635251 DEFB130BP0DP73 79 aa7.53□□□□□ -1.2
PSPC1-207ENST00000635251 DEFB130AP0DP74 79 aa7.53□□□□□ -1.2
PSPC1-207ENST00000635251 PPDPFQ9H3Y8 114 aa7.53□□□□□ -1.2
PSPC1-207ENST00000635251 WNK1Q9H4A3 2382 aa7.52□□□□□ -1.21
PSPC1-207ENST00000635251 FLNBO75369 2602 aaKnown RBP7.52□□□□□ -1.21
PSPC1-207ENST00000635251 FAM218AQ96MZ4 157 aa7.52□□□□□ -1.21
PSPC1-207ENST00000635251 NHLRC4P0CG21 123 aaPredicted RBP7.52□□□□□ -1.21
PSPC1-207ENST00000635251 FAM222AQ5U5X8 452 aa7.52□□□□□ -1.21
PSPC1-207ENST00000635251 C5orf38Q86SI9 138 aa7.52□□□□□ -1.21
PSPC1-207ENST00000635251 LRRK2Q5S007 2527 aa7.51□□□□□ -1.21
PSPC1-207ENST00000635251 ACYP1P07311 99 aa7.51□□□□□ -1.21
PSPC1-207ENST00000635251 PFN2P35080 140 aa7.51□□□□□ -1.21
PSPC1-207ENST00000635251 ABCA12Q86UK0 2595 aa7.51□□□□□ -1.21
PSPC1-207ENST00000635251 UBR5O95071 2799 aaPredicted RBP7.51□□□□□ -1.21
PSPC1-207ENST00000635251 MYO9AB2RTY4 2548 aa7.51□□□□□ -1.21
PSPC1-207ENST00000635251 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
PSPC1-207ENST00000635251 WIPF1O43516 503 aa7.5□□□□□ -1.21
PSPC1-207ENST00000635251 RPL28P46779 137 aaKnown RBP7.5□□□□□ -1.21
PSPC1-207ENST00000635251 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
PSPC1-207ENST00000635251 Q9HAA7 133 aa7.5□□□□□ -1.21
PSPC1-207ENST00000635251 CENPEQ02224 2701 aa7.5□□□□□ -1.21
PSPC1-207ENST00000635251 KRTAP1-1Q07627 177 aa7.5□□□□□ -1.21
PSPC1-207ENST00000635251 C11orf68Q9H3H3 251 aaKnown RBP7.5□□□□□ -1.21
PSPC1-207ENST00000635251 IGKV2-28A0A075B6P5 120 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 A0A087WZ39 114 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 IGKV2D-28P01615 120 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 IBA57-AS1B1ANH7 110 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 DNAL4O96015 105 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 GYPEP15421 78 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 CCL18P55774 89 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 C6orf226Q5I0X4 101 aa7.49□□□□□ -1.21
PSPC1-207ENST00000635251 B5MCH6 92 aa7.48□□□□□ -1.21
PSPC1-207ENST00000635251 PAX4O43316 350 aa7.48□□□□□ -1.21
PSPC1-207ENST00000635251 SMIM11BQ8TCY0 68 aa7.48□□□□□ -1.21
PSPC1-207ENST00000635251 MALP21145 153 aa7.48□□□□□ -1.21
PSPC1-207ENST00000635251 OR13C6PQ8NH95 151 aa7.48□□□□□ -1.21
PSPC1-207ENST00000635251 HELZ2Q9BYK8 2649 aaKnown RBP7.47□□□□□ -1.21
PSPC1-207ENST00000635251 INAFM2P0DMQ5 153 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 XCL1P47992 114 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 SS18Q15532 418 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 C5orf47Q569G3 176 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 KIR2DL5BQ8NHK3 375 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 SONP18583 2426 aaKnown RBP7.47□□□□□ -1.21
PSPC1-207ENST00000635251 A0A096LPF7 62 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 CCDC179H3BU77 68 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 HILS1P60008 231 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 SS18L2Q9UHA2 77 aa7.47□□□□□ -1.21
PSPC1-207ENST00000635251 TRBV7-7A0A0K0K1E9 115 aa7.46□□□□□ -1.22
PSPC1-207ENST00000635251 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
PSPC1-207ENST00000635251 A0A087WYN8 130 aa7.45□□□□□ -1.22
PSPC1-207ENST00000635251 H0YGX0 51 aa7.45□□□□□ -1.22
PSPC1-207ENST00000635251 C22orf24Q9Y442 160 aa7.45□□□□□ -1.22
PSPC1-207ENST00000635251 TLN2Q9Y4G6 2542 aa7.45□□□□□ -1.22
PSPC1-207ENST00000635251 ITPR3Q14573 2671 aa7.44□□□□□ -1.22
PSPC1-207ENST00000635251 LINC00643Q86TS7 51 aa7.44□□□□□ -1.22
PSPC1-207ENST00000635251 SMCR5Q8TEV8 140 aa7.44□□□□□ -1.22
PSPC1-207ENST00000635251 ATP5G1P05496 136 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms