RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 TMEM170BQ5T4T1 132 aa-0.78□□□□□ -2.53
SCARNA4-201ENST00000629045 PYDC1Q8WXC3 89 aa-0.78□□□□□ -2.53
SCARNA4-201ENST00000629045 DNAH11Q96DT5 4516 aa-0.78□□□□□ -2.53
SCARNA4-201ENST00000629045 DNAH1Q9P2D7 4330 aa-0.78□□□□□ -2.53
SCARNA4-201ENST00000629045 ARFGEF1Q9Y6D6 1849 aa-0.78□□□□□ -2.53
SCARNA4-201ENST00000629045 GCN1Q92616 2671 aaKnown RBP-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 MRC1P22897 1456 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 DNAH7Q8WXX0 4024 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 PARP14Q460N5 1801 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 TRAV13-2A0A0B4J235 113 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 SPAARA0A1B0GVQ0 90 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 B2MP61769 119 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 COX17Q14061 63 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 Q6JHZ5 121 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 AKAP14Q86UN6 197 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 V9GYH0 126 aa-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 UTP20O75691 2785 aaKnown RBP-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 DYNC1H1Q14204 4646 aaKnown RBP-0.79□□□□□ -2.54
SCARNA4-201ENST00000629045 ZNF518AQ6AHZ1 1483 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 PXDNQ92626 1479 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 CPSF4LA6NMK7 179 aaKnown RBP-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 UBE2D3P61077 147 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 UBE2D2P62837 147 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 TSTD1Q8NFU3 115 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 LZICQ8WZA0 190 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 USMG5Q96IX5 58 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 LENEPQ9Y5L5 61 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 CEP295Q9C0D2 2601 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 EYSQ5T1H1 3165 aa-0.8□□□□□ -2.54
SCARNA4-201ENST00000629045 PDE4DIPQ5VU43 2346 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 LYSTQ99698 3801 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 ACACBO00763 2458 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 PIGBOS1A0A0B4J2F0 54 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 ARPC5O15511 151 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 COPZ1P61923 177 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 TTC9CQ8N5M4 171 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 NAA60Q9H7X0 242 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 TPT1P8Q9HAU6 139 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 COL14A1Q05707 1796 aaKnown RBP-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 SACSQ9NZJ4 4579 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 CFAP46Q8IYW2 2715 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 NSD3Q9BZ95 1437 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 COL4A6Q14031 1691 aa-0.81□□□□□ -2.54
SCARNA4-201ENST00000629045 CEP290O15078 2479 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 TRAV30A0A087WSZ9 112 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 F8VRH5 84 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 MT1BP07438 61 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 RPS25P62851 125 aaKnown RBP-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 S4R3F8 94 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 A0A0C4DFX4 3053 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 POLA1P09884 1462 aaPredicted RBP-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 FAM186AA6NE01 2351 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 RELNP78509 3460 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 FHAD1B1AJZ9 1412 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 PAPPAQ13219 1627 aa-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 APOBP04114 4563 aaKnown RBP-0.82□□□□□ -2.54
SCARNA4-201ENST00000629045 KDM3BQ7LBC6 1761 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 GAPVD1Q14C86 1478 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 SMCO1Q147U7 214 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 HEPN1Q6WQI6 88 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 BAGE2Q86Y30 109 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 TCEAL4Q96EI5 215 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 DPH3Q96FX2 82 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 TMEM191AQ9H0A3 160 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 COPZ2Q9P299 210 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 GOLGA4Q13439 2230 aaKnown RBP-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 WNK3Q9BYP7 1800 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 MYO9AB2RTY4 2548 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 DMXL1Q9Y485 3027 aa-0.83□□□□□ -2.54
SCARNA4-201ENST00000629045 LRRC37A2A6NM11 1700 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 NBEAQ8NFP9 2946 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 TLN1Q9Y490 2541 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 MAGI1Q96QZ7 1491 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 UQCR11O14957 56 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 APOC3P02656 99 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 MT1GP13640 62 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 HIST1H1DP16402 221 aaKnown RBP-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 FGF7P21781 194 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 DEFB123Q8N688 67 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 Q8N8P6 123 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 CCDC167Q9P0B6 97 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 CHD7Q9P2D1 2997 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 TRIOO75962 3097 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 ADAMTS12P58397 1594 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 SRCAPQ6ZRS2 3230 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 ANKRD30AQ9BXX3 1397 aa-0.84□□□□□ -2.54
SCARNA4-201ENST00000629045 PTPN23Q9H3S7 1636 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 A0A087WVE0 104 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 TRBV7-4A0A0J9YYF1 115 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 MT2AP02795 61 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 TPPP2P59282 170 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 Q6AWC8 147 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 PPIP5K1Q6PFW1 1433 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 CLPSL2Q6UWE3 100 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 MT1MQ8N339 61 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 ITPR2Q14571 2701 aa-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 KDM5AP29375 1690 aaKnown RBP-0.85□□□□□ -2.55
SCARNA4-201ENST00000629045 MYOM3Q5VTT5 1437 aa-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 I3L3M4 83 aa-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 DR1Q01658 176 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms