RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
CNOT9-209ENST00000627282 ZNF815PA8K554 130 aa13.11□□□□□ -0.31
CNOT9-209ENST00000627282 UBE2L6O14933 153 aa13.11□□□□□ -0.31
CNOT9-209ENST00000627282 LEPROTO15243 131 aa13.11□□□□□ -0.31
CNOT9-209ENST00000627282 ZNF25P17030 456 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-209ENST00000627282 TIRAPP58753 221 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 TAL2Q16559 108 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 OR5A1Q8NGJ0 315 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 CDC42SE2Q9NRR3 84 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 LINC00588Q9Y4M8 146 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 TSPEAR-AS2P59090 65 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 AMMECR1LQ6DCA0 310 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 LYPD5Q6UWN5 251 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 FAM19A3Q7Z5A8 133 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 ATP6V0E2Q8NHE4 81 aa13.1□□□□□ -0.31
CNOT9-209ENST00000627282 J3QQQ9 107 aa13.09□□□□□ -0.31
CNOT9-209ENST00000627282 CCL18P55774 89 aa13.09□□□□□ -0.31
CNOT9-209ENST00000627282 SH2D6Q7Z4S9 175 aa13.09□□□□□ -0.31
CNOT9-209ENST00000627282 PLEKHB2Q96CS7 222 aa13.09□□□□□ -0.31
CNOT9-209ENST00000627282 TMEM101Q96IK0 257 aa13.09□□□□□ -0.31
CNOT9-209ENST00000627282 DNAH6Q9C0G6 4158 aa13.07□□□□□ -0.32
CNOT9-209ENST00000627282 A6NDN8 102 aa13.07□□□□□ -0.32
CNOT9-209ENST00000627282 LGALS3P17931 250 aaKnown RBP13.07□□□□□ -0.32
CNOT9-209ENST00000627282 UBE2DNLQ8IWF7 75 aa13.07□□□□□ -0.32
CNOT9-209ENST00000627282 IGLV5-45A0A087WSX0 123 aa13.06□□□□□ -0.32
CNOT9-209ENST00000627282 TAX1BP3O14907 124 aa13.06□□□□□ -0.32
CNOT9-209ENST00000627282 CEND1Q8N111 149 aa13.06□□□□□ -0.32
CNOT9-209ENST00000627282 TM2D2Q9BX73 214 aa13.06□□□□□ -0.32
CNOT9-209ENST00000627282 GEMIN7Q9H840 131 aaKnown RBP13.06□□□□□ -0.32
CNOT9-209ENST00000627282 GCSHP23434 173 aa13.06□□□□□ -0.32
CNOT9-209ENST00000627282 COX11Q9Y6N1 276 aa13.06□□□□□ -0.32
CNOT9-209ENST00000627282 GAGE6Q13070 117 aa13.05□□□□□ -0.32
CNOT9-209ENST00000627282 IGHV1-58A0A0C4DH39 117 aa13.04□□□□□ -0.32
CNOT9-209ENST00000627282 HERVK_113P63121 156 aa13.04□□□□□ -0.32
CNOT9-209ENST00000627282 LINC00242Q5T6M2 205 aa13.04□□□□□ -0.32
CNOT9-209ENST00000627282 SCGB1D4Q6XE38 83 aa13.04□□□□□ -0.32
CNOT9-209ENST00000627282 LINC00469Q8N7U9 141 aa13.04□□□□□ -0.32
CNOT9-209ENST00000627282 CHCHD5Q9BSY4 110 aa13.04□□□□□ -0.32
CNOT9-209ENST00000627282 EPPK1P58107 5090 aaKnown RBP13.03□□□□□ -0.32
CNOT9-209ENST00000627282 IGHV3-30-3P0DP02 117 aa13.03□□□□□ -0.32
CNOT9-209ENST00000627282 FXYD2P54710 66 aa13.03□□□□□ -0.32
CNOT9-209ENST00000627282 HIST1H4GQ99525 98 aa13.03□□□□□ -0.32
CNOT9-209ENST00000627282 UPK3BQ9BT76 320 aa13.03□□□□□ -0.32
CNOT9-209ENST00000627282 IGHV3-64A0A075B6Q5 118 aa13.02□□□□□ -0.32
CNOT9-209ENST00000627282 H3BRM9 83 aa13.02□□□□□ -0.32
CNOT9-209ENST00000627282 COX6A2Q02221 97 aa13.02□□□□□ -0.32
CNOT9-209ENST00000627282 Q6ZVH6 145 aa13.02□□□□□ -0.32
CNOT9-209ENST00000627282 CDKN2A-AS1Q9UH64 79 aa13.02□□□□□ -0.33
CNOT9-209ENST00000627282 TRAV8-3A0A0A6YYJ7 113 aa13.01□□□□□ -0.33
CNOT9-209ENST00000627282 TRAV13-1A0A0B4J241 112 aa13□□□□□ -0.33
CNOT9-209ENST00000627282 SPINK8P0C7L1 97 aa13□□□□□ -0.33
CNOT9-209ENST00000627282 LELP1Q5T871 98 aa13□□□□□ -0.33
CNOT9-209ENST00000627282 SPANXB1Q9NS25 103 aaPredicted RBP13□□□□□ -0.33
CNOT9-209ENST00000627282 IGLV4-60A0A075B6I1 120 aa12.99□□□□□ -0.33
CNOT9-209ENST00000627282 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
CNOT9-209ENST00000627282 K7EP13 123 aa12.99□□□□□ -0.33
CNOT9-209ENST00000627282 SMIM13P0DJ93 91 aa12.99□□□□□ -0.33
CNOT9-209ENST00000627282 WFDC10BQ8IUB3 73 aa12.99□□□□□ -0.33
CNOT9-209ENST00000627282 Q9H8V8 135 aa12.98□□□□□ -0.33
CNOT9-209ENST00000627282 A0A1B0GUV1 79 aa12.97□□□□□ -0.33
CNOT9-209ENST00000627282 SRSF9Q13242 221 aaKnown RBP eCLIP12.96□□□□□ -0.33
CNOT9-209ENST00000627282 IGLV5-39A0A0G2JS06 123 aa12.95□□□□□ -0.34
CNOT9-209ENST00000627282 C10orf126Q8N4M7 172 aa12.95□□□□□ -0.34
CNOT9-209ENST00000627282 FRAS1Q86XX4 4008 aa12.95□□□□□ -0.34
CNOT9-209ENST00000627282 A0A0J9YXY3 114 aa12.95□□□□□ -0.34
CNOT9-209ENST00000627282 C9orf118A6NHY6 69 aa12.95□□□□□ -0.34
CNOT9-209ENST00000627282 NHP2Q9NX24 153 aaKnown RBP12.95□□□□□ -0.34
CNOT9-209ENST00000627282 NDUFA12Q9UI09 145 aa12.95□□□□□ -0.34
CNOT9-209ENST00000627282 TMEM262E9PQX1 116 aa12.94□□□□□ -0.34
CNOT9-209ENST00000627282 RBX1P62877 108 aa12.94□□□□□ -0.34
CNOT9-209ENST00000627282 SMIM1B2RUZ4 78 aa12.93□□□□□ -0.34
CNOT9-209ENST00000627282 A0A1B0GWB2 263 aa12.92□□□□□ -0.34
CNOT9-209ENST00000627282 IGHV3-30P01768 117 aa12.92□□□□□ -0.34
CNOT9-209ENST00000627282 DNAH10OSP0CZ25 163 aa12.92□□□□□ -0.34
CNOT9-209ENST00000627282 IGHV3-30-5P0DP03 117 aa12.92□□□□□ -0.34
CNOT9-209ENST00000627282 RAB37Q96AX2 223 aa12.92□□□□□ -0.34
CNOT9-209ENST00000627282 M0R2N4 97 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 Q8N3U1 123 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 KRTAP1-5Q9BYS1 174 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 TMEM238LA0A1B0GVL6 79 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 A6NJY4 79 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 TMEM238C9JI98 176 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 VAMP3Q15836 100 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 Q6ZR54 194 aa12.91□□□□□ -0.34
CNOT9-209ENST00000627282 DNAH10Q8IVF4 4471 aa12.9□□□□□ -0.34
CNOT9-209ENST00000627282 LINC00959A0A1B0GUT2 108 aa12.9□□□□□ -0.34
CNOT9-209ENST00000627282 NDUFA1O15239 70 aa12.9□□□□□ -0.34
CNOT9-209ENST00000627282 LINC01556Q5JQF7 62 aa12.9□□□□□ -0.34
CNOT9-209ENST00000627282 DNAH2Q9P225 4427 aa12.9□□□□□ -0.34
CNOT9-209ENST00000627282 BIRC6Q9NR09 4857 aa12.89□□□□□ -0.35
CNOT9-209ENST00000627282 IGKV3OR2-268A0A0C4DH90 116 aa12.89□□□□□ -0.35
CNOT9-209ENST00000627282 K7ERJ3 54 aa12.89□□□□□ -0.35
CNOT9-209ENST00000627282 UBE2V1Q13404 147 aa12.88□□□□□ -0.35
CNOT9-209ENST00000627282 LITAFQ99732 161 aa12.88□□□□□ -0.35
CNOT9-209ENST00000627282 IGHV3OR16-9A0A0B4J2B5 98 aa12.88□□□□□ -0.35
CNOT9-209ENST00000627282 H3BUT2 72 aa12.88□□□□□ -0.35
CNOT9-209ENST00000627282 TIMM17BO60830 172 aa12.87□□□□□ -0.35
CNOT9-209ENST00000627282 IGHV3-33P01772 117 aa12.87□□□□□ -0.35
CNOT9-209ENST00000627282 CCL25O15444 150 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms