RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 IGHV3-33P01772 117 aa13.9□□□□□ -0.18
PCDHB12-203ENST00000624949 IGHV3-30-3P0DP02 117 aa13.9□□□□□ -0.18
PCDHB12-203ENST00000624949 IGHV3-30-5P0DP03 117 aa13.9□□□□□ -0.18
PCDHB12-203ENST00000624949 TRAV13-1A0A0B4J241 112 aa13.89□□□□□ -0.19
PCDHB12-203ENST00000624949 ANGP03950 147 aaKnown RBP13.89□□□□□ -0.19
PCDHB12-203ENST00000624949 ZNF22P17026 224 aaPredicted RBP13.89□□□□□ -0.19
PCDHB12-203ENST00000624949 HERVK_113P61574 105 aa13.89□□□□□ -0.19
PCDHB12-203ENST00000624949 CLPSL2Q6UWE3 100 aa13.89□□□□□ -0.19
PCDHB12-203ENST00000624949 CSMD3Q7Z407 3707 aa13.89□□□□□ -0.19
PCDHB12-203ENST00000624949 TSPEAR-AS2P59090 65 aa13.89□□□□□ -0.19
PCDHB12-203ENST00000624949 DNAH7Q8WXX0 4024 aa13.88□□□□□ -0.19
PCDHB12-203ENST00000624949 TMEM223A0PJW6 202 aa13.88□□□□□ -0.19
PCDHB12-203ENST00000624949 K7EP13 123 aa13.88□□□□□ -0.19
PCDHB12-203ENST00000624949 FXYD2P54710 66 aa13.88□□□□□ -0.19
PCDHB12-203ENST00000624949 ZNF815PA8K554 130 aa13.87□□□□□ -0.19
PCDHB12-203ENST00000624949 GCSHP23434 173 aa13.87□□□□□ -0.19
PCDHB12-203ENST00000624949 A6NDN8 102 aa13.87□□□□□ -0.19
PCDHB12-203ENST00000624949 LINC00269Q8N2A0 174 aa13.87□□□□□ -0.19
PCDHB12-203ENST00000624949 TM2D2Q9BX73 214 aa13.87□□□□□ -0.19
PCDHB12-203ENST00000624949 TGP01266 2768 aa13.86□□□□□ -0.19
PCDHB12-203ENST00000624949 UBE2D1P51668 147 aa13.86□□□□□ -0.19
PCDHB12-203ENST00000624949 CEND1Q8N111 149 aa13.86□□□□□ -0.19
PCDHB12-203ENST00000624949 PLEKHB2Q96CS7 222 aa13.86□□□□□ -0.19
PCDHB12-203ENST00000624949 DYNC2H1Q8NCM8 4307 aaKnown RBP13.86□□□□□ -0.19
PCDHB12-203ENST00000624949 TAL2Q16559 108 aa13.85□□□□□ -0.19
PCDHB12-203ENST00000624949 MUC7Q8TAX7 377 aa13.85□□□□□ -0.19
PCDHB12-203ENST00000624949 KLK12Q9UKR0 248 aa13.85□□□□□ -0.19
PCDHB12-203ENST00000624949 H3BRM9 83 aa13.83□□□□□ -0.19
PCDHB12-203ENST00000624949 WWC2-AS2Q96NR7 200 aa13.83□□□□□ -0.19
PCDHB12-203ENST00000624949 J3QQQ9 107 aa13.83□□□□□ -0.2
PCDHB12-203ENST00000624949 UBE2DNLQ8IWF7 75 aa13.83□□□□□ -0.2
PCDHB12-203ENST00000624949 TINCRA0A1B0GVN0 87 aa13.82□□□□□ -0.2
PCDHB12-203ENST00000624949 LEPROTO15243 131 aa13.82□□□□□ -0.2
PCDHB12-203ENST00000624949 REG3AQ06141 175 aa13.82□□□□□ -0.2
PCDHB12-203ENST00000624949 HIST1H4GQ99525 98 aa13.82□□□□□ -0.2
PCDHB12-203ENST00000624949 LINC00242Q5T6M2 205 aa13.82□□□□□ -0.2
PCDHB12-203ENST00000624949 GEMIN7Q9H840 131 aaKnown RBP13.82□□□□□ -0.2
PCDHB12-203ENST00000624949 STARD9Q9P2P6 4700 aa13.81□□□□□ -0.2
PCDHB12-203ENST00000624949 LINC00959A0A1B0GUT2 108 aa13.81□□□□□ -0.2
PCDHB12-203ENST00000624949 COX6A2Q02221 97 aa13.81□□□□□ -0.2
PCDHB12-203ENST00000624949 LINC01556Q5JQF7 62 aa13.81□□□□□ -0.2
PCDHB12-203ENST00000624949 IGHV3-64A0A075B6Q5 118 aa13.8□□□□□ -0.2
PCDHB12-203ENST00000624949 SCGB1D4Q6XE38 83 aa13.8□□□□□ -0.2
PCDHB12-203ENST00000624949 PTTG1IPP53801 180 aa13.8□□□□□ -0.2
PCDHB12-203ENST00000624949 RAB37Q96AX2 223 aa13.79□□□□□ -0.2
PCDHB12-203ENST00000624949 UPK3BQ9BT76 320 aa13.79□□□□□ -0.2
PCDHB12-203ENST00000624949 LYSTQ99698 3801 aa13.79□□□□□ -0.2
PCDHB12-203ENST00000624949 IGLV10-54A0A075B6I4 117 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 C9orf118A6NHY6 69 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 CCL25O15444 150 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 DNAH10OSP0CZ25 163 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 SMIM13P0DJ93 91 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 LGALS3P17931 250 aaKnown RBP13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 UBE2V1Q13404 147 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 UBE2WQ96B02 151 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 PLECQ15149 4684 aaKnown RBP13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 CRPP02741 224 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 SS18Q15532 418 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 VAMP3Q15836 100 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 Q9H8V8 135 aa13.78□□□□□ -0.2
PCDHB12-203ENST00000624949 K7ERJ3 54 aa13.77□□□□□ -0.21
PCDHB12-203ENST00000624949 HERVK_113P63121 156 aa13.77□□□□□ -0.21
PCDHB12-203ENST00000624949 ENHOQ6UWT2 76 aa13.77□□□□□ -0.21
PCDHB12-203ENST00000624949 FAM19A3Q7Z5A8 133 aa13.77□□□□□ -0.21
PCDHB12-203ENST00000624949 NHP2Q9NX24 153 aaKnown RBP13.77□□□□□ -0.21
PCDHB12-203ENST00000624949 TRAV8-3A0A0A6YYJ7 113 aa13.76□□□□□ -0.21
PCDHB12-203ENST00000624949 XCL1P47992 114 aa13.76□□□□□ -0.21
PCDHB12-203ENST00000624949 PRR34Q9NV39 138 aa13.76□□□□□ -0.21
PCDHB12-203ENST00000624949 CDKN2A-AS1Q9UH64 79 aa13.76□□□□□ -0.21
PCDHB12-203ENST00000624949 NAA38Q9BRA0 125 aaKnown RBP13.76□□□□□ -0.21
PCDHB12-203ENST00000624949 H3BUT2 72 aa13.74□□□□□ -0.21
PCDHB12-203ENST00000624949 IGLV5-45A0A087WSX0 123 aa13.74□□□□□ -0.21
PCDHB12-203ENST00000624949 IGHV1-58A0A0C4DH39 117 aa13.74□□□□□ -0.21
PCDHB12-203ENST00000624949 PCP4P48539 62 aa13.74□□□□□ -0.21
PCDHB12-203ENST00000624949 CHCHD10Q8WYQ3 142 aaPredicted RBP13.73□□□□□ -0.21
PCDHB12-203ENST00000624949 SPINK8P0C7L1 97 aa13.72□□□□□ -0.21
PCDHB12-203ENST00000624949 SRSF9Q13242 221 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCDHB12-203ENST00000624949 SPANXB1Q9NS25 103 aaPredicted RBP13.72□□□□□ -0.21
PCDHB12-203ENST00000624949 TENM2Q9NT68 2774 aa13.72□□□□□ -0.21
PCDHB12-203ENST00000624949 A0A1B0GWB2 263 aa13.71□□□□□ -0.21
PCDHB12-203ENST00000624949 C5orf38Q86SI9 138 aa13.71□□□□□ -0.21
PCDHB12-203ENST00000624949 C10orf126Q8N4M7 172 aa13.71□□□□□ -0.21
PCDHB12-203ENST00000624949 IGHV3OR16-9A0A0B4J2B5 98 aa13.7□□□□□ -0.22
PCDHB12-203ENST00000624949 CASC10Q5T4H9 136 aa13.7□□□□□ -0.22
PCDHB12-203ENST00000624949 Q9HAA7 133 aa13.7□□□□□ -0.22
PCDHB12-203ENST00000624949 MIAQ16674 131 aa13.69□□□□□ -0.22
PCDHB12-203ENST00000624949 A0A0J9YXY3 114 aa13.68□□□□□ -0.22
PCDHB12-203ENST00000624949 A0A1W2PPM0 123 aa13.68□□□□□ -0.22
PCDHB12-203ENST00000624949 GAGE12HA6NDE8 117 aa13.68□□□□□ -0.22
PCDHB12-203ENST00000624949 CD164L2Q6UWJ8 174 aa13.68□□□□□ -0.22
PCDHB12-203ENST00000624949 TRAV8-4A0A0B4J246 113 aa13.67□□□□□ -0.22
PCDHB12-203ENST00000624949 IBA57-AS1B1ANH7 110 aa13.67□□□□□ -0.22
PCDHB12-203ENST00000624949 IGKV2D-24A0A075B6R9 120 aa13.65□□□□□ -0.22
PCDHB12-203ENST00000624949 SMIM1B2RUZ4 78 aa13.65□□□□□ -0.22
PCDHB12-203ENST00000624949 NDUFA12Q9UI09 145 aa13.65□□□□□ -0.22
PCDHB12-203ENST00000624949 A0A087WZ39 114 aa13.65□□□□□ -0.22
PCDHB12-203ENST00000624949 IGLV5-39A0A0G2JS06 123 aa13.65□□□□□ -0.22
PCDHB12-203ENST00000624949 FOXI1Q12951 378 aa13.65□□□□□ -0.22
PCDHB12-203ENST00000624949 C1orf43Q9BWL3 253 aa13.65□□□□□ -0.22
PCDHB12-203ENST00000624949 KRTAP1-5Q9BYS1 174 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms