RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

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Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 LINC00269Q8N2A0 174 aa12.09□□□□□ -0.47
PTCHD3-202ENST00000622555 PLECQ15149 4684 aaKnown RBP12.09□□□□□ -0.47
PTCHD3-202ENST00000622555 PCP2Q8IVA1 136 aa12.08□□□□□ -0.47
PTCHD3-202ENST00000622555 TRAV13-1A0A0B4J241 112 aa12.08□□□□□ -0.48
PTCHD3-202ENST00000622555 BVES-AS1Q5T3Y7 98 aa12.08□□□□□ -0.48
PTCHD3-202ENST00000622555 NMUP48645 174 aa12.06□□□□□ -0.48
PTCHD3-202ENST00000622555 REG3AQ06141 175 aa12.06□□□□□ -0.48
PTCHD3-202ENST00000622555 UBE2D1P51668 147 aa12.06□□□□□ -0.48
PTCHD3-202ENST00000622555 CRPP02741 224 aa12.05□□□□□ -0.48
PTCHD3-202ENST00000622555 HIGD1BQ9P298 99 aa12.05□□□□□ -0.48
PTCHD3-202ENST00000622555 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
PTCHD3-202ENST00000622555 PRR34Q9NV39 138 aa12.04□□□□□ -0.48
PTCHD3-202ENST00000622555 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
PTCHD3-202ENST00000622555 A0A0J9YXV3 536 aa12.03□□□□□ -0.48
PTCHD3-202ENST00000622555 LINC00959A0A1B0GUT2 108 aa12.03□□□□□ -0.48
PTCHD3-202ENST00000622555 ENHOQ6UWT2 76 aa12.03□□□□□ -0.48
PTCHD3-202ENST00000622555 C10orf126Q8N4M7 172 aa12.03□□□□□ -0.48
PTCHD3-202ENST00000622555 SS18Q15532 418 aa12.02□□□□□ -0.49
PTCHD3-202ENST00000622555 HSD52Q0P140 79 aa12.01□□□□□ -0.49
PTCHD3-202ENST00000622555 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PTCHD3-202ENST00000622555 LYSTQ99698 3801 aa12.01□□□□□ -0.49
PTCHD3-202ENST00000622555 CHAC1Q9BUX1 264 aa12.01□□□□□ -0.49
PTCHD3-202ENST00000622555 IGLV10-54A0A075B6I4 117 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 TINCRA0A1B0GVN0 87 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 C11orf86A6NJI1 115 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 E9PLD3 99 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 TTTY13Q9BZ97 58 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
PTCHD3-202ENST00000622555 IBA57-AS1B1ANH7 110 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 K7EP13 123 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 LY6G6CO95867 125 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 SEC11AP67812 179 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 MIAQ16674 131 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 MAPKAPK5-AS1Q8N8E1 139 aa12□□□□□ -0.49
PTCHD3-202ENST00000622555 CCL25O15444 150 aa11.99□□□□□ -0.49
PTCHD3-202ENST00000622555 XCL1P47992 114 aa11.99□□□□□ -0.49
PTCHD3-202ENST00000622555 FAM19A3Q7Z5A8 133 aa11.99□□□□□ -0.49
PTCHD3-202ENST00000622555 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
PTCHD3-202ENST00000622555 LINC00476Q8WZB0 136 aa11.99□□□□□ -0.49
PTCHD3-202ENST00000622555 HERVK_113P63121 156 aa11.98□□□□□ -0.49
PTCHD3-202ENST00000622555 COX6A2Q02221 97 aa11.98□□□□□ -0.49
PTCHD3-202ENST00000622555 ORAOV1Q8WV07 137 aa11.98□□□□□ -0.49
PTCHD3-202ENST00000622555 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
PTCHD3-202ENST00000622555 Q9HAA7 133 aa11.98□□□□□ -0.49
PTCHD3-202ENST00000622555 TRAV8-4A0A0B4J246 113 aa11.97□□□□□ -0.49
PTCHD3-202ENST00000622555 KRTAP1-5Q9BYS1 174 aa11.97□□□□□ -0.49
PTCHD3-202ENST00000622555 COX11Q9Y6N1 276 aa11.97□□□□□ -0.49
PTCHD3-202ENST00000622555 TRAV8-3A0A0A6YYJ7 113 aa11.97□□□□□ -0.49
PTCHD3-202ENST00000622555 NBDYA0A0U1RRE5 68 aa11.97□□□□□ -0.49
PTCHD3-202ENST00000622555 TAX1BP3O14907 124 aa11.97□□□□□ -0.49
PTCHD3-202ENST00000622555 TTC32Q5I0X7 151 aa11.97□□□□□ -0.49
PTCHD3-202ENST00000622555 TMEM170BQ5T4T1 132 aa11.97□□□□□ -0.49
PTCHD3-202ENST00000622555 ZNF22P17026 224 aaPredicted RBP11.96□□□□□ -0.49
PTCHD3-202ENST00000622555 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
PTCHD3-202ENST00000622555 CD164L2Q6UWJ8 174 aa11.94□□□□□ -0.5
PTCHD3-202ENST00000622555 CDKN2A-AS1Q9UH64 79 aa11.94□□□□□ -0.5
PTCHD3-202ENST00000622555 IGKV2D-24A0A075B6R9 120 aa11.94□□□□□ -0.5
PTCHD3-202ENST00000622555 IGLV5-45A0A087WSX0 123 aa11.94□□□□□ -0.5
PTCHD3-202ENST00000622555 MYMXA0A1B0GTQ4 84 aa11.94□□□□□ -0.5
PTCHD3-202ENST00000622555 GAGE12HA6NDE8 117 aa11.94□□□□□ -0.5
PTCHD3-202ENST00000622555 IGHV3OR16-9A0A0B4J2B5 98 aa11.93□□□□□ -0.5
PTCHD3-202ENST00000622555 H3BRM9 83 aa11.92□□□□□ -0.5
PTCHD3-202ENST00000622555 M0R2N4 97 aa11.92□□□□□ -0.5
PTCHD3-202ENST00000622555 TAL2Q16559 108 aa11.92□□□□□ -0.5
PTCHD3-202ENST00000622555 Q6ZVH6 145 aa11.92□□□□□ -0.5
PTCHD3-202ENST00000622555 C5orf38Q86SI9 138 aa11.92□□□□□ -0.5
PTCHD3-202ENST00000622555 RMI2Q96E14 147 aa11.92□□□□□ -0.5
PTCHD3-202ENST00000622555 VPS13DQ5THJ4 4388 aa11.92□□□□□ -0.5
PTCHD3-202ENST00000622555 HERVK_113P61574 105 aa11.91□□□□□ -0.5
PTCHD3-202ENST00000622555 FOXI1Q12951 378 aa11.91□□□□□ -0.5
PTCHD3-202ENST00000622555 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
PTCHD3-202ENST00000622555 A6NDN8 102 aa11.9□□□□□ -0.5
PTCHD3-202ENST00000622555 COX7A2LO14548 114 aa11.9□□□□□ -0.5
PTCHD3-202ENST00000622555 SPINK8P0C7L1 97 aa11.9□□□□□ -0.5
PTCHD3-202ENST00000622555 KRTAP26-1Q6PEX3 210 aa11.9□□□□□ -0.5
PTCHD3-202ENST00000622555 DNAH1Q9P2D7 4330 aa11.89□□□□□ -0.51
PTCHD3-202ENST00000622555 A0A087WZ39 114 aa11.89□□□□□ -0.51
PTCHD3-202ENST00000622555 TMEM223A0PJW6 202 aa11.89□□□□□ -0.51
PTCHD3-202ENST00000622555 ALMS1Q8TCU4 4167 aa11.88□□□□□ -0.51
PTCHD3-202ENST00000622555 IGHV3-64A0A075B6Q5 118 aa11.88□□□□□ -0.51
PTCHD3-202ENST00000622555 CEND1Q8N111 149 aa11.88□□□□□ -0.51
PTCHD3-202ENST00000622555 MALP21145 153 aa11.87□□□□□ -0.51
PTCHD3-202ENST00000622555 Q6ZR54 194 aa11.87□□□□□ -0.51
PTCHD3-202ENST00000622555 SMIM1B2RUZ4 78 aa11.86□□□□□ -0.51
PTCHD3-202ENST00000622555 FXYD2P54710 66 aa11.86□□□□□ -0.51
PTCHD3-202ENST00000622555 ZNF815PA8K554 130 aa11.86□□□□□ -0.51
PTCHD3-202ENST00000622555 LEPROTO15243 131 aa11.86□□□□□ -0.51
PTCHD3-202ENST00000622555 TSPEAR-AS2P59090 65 aa11.86□□□□□ -0.51
PTCHD3-202ENST00000622555 GCSHP23434 173 aa11.85□□□□□ -0.51
PTCHD3-202ENST00000622555 LINC01561Q8N1V8 128 aa11.85□□□□□ -0.51
PTCHD3-202ENST00000622555 IGHV1-58A0A0C4DH39 117 aa11.84□□□□□ -0.51
PTCHD3-202ENST00000622555 UBE2V1Q13404 147 aa11.84□□□□□ -0.51
PTCHD3-202ENST00000622555 C9orf118A6NHY6 69 aa11.83□□□□□ -0.52
PTCHD3-202ENST00000622555 J3QQQ9 107 aa11.83□□□□□ -0.52
PTCHD3-202ENST00000622555 PSCAO43653 123 aa11.83□□□□□ -0.52
PTCHD3-202ENST00000622555 PLEKHB2Q96CS7 222 aa11.83□□□□□ -0.52
PTCHD3-202ENST00000622555 IGLV5-39A0A0G2JS06 123 aa11.83□□□□□ -0.52
PTCHD3-202ENST00000622555 APOMO95445 188 aa11.83□□□□□ -0.52
PTCHD3-202ENST00000622555 LCE6AA0A183 80 aa11.82□□□□□ -0.52
PTCHD3-202ENST00000622555 C6orf223Q8N319 242 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms