RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 IGLL1P15814 213 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 PLNP26678 52 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 DAZ2Q13117 558 aaKnown RBP3.22□□□□□ -1.89
VPS29-212ENST00000621131 LINC01545Q5VT33 79 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 CFAP126Q5VTH2 177 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 LGALS9CQ6DKI2 356 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 C2orf66Q6UXQ4 117 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 SPATA12Q7Z6I5 190 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 C1orf158Q8N1D5 194 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 C11orf72Q8NBR9 251 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 WFDC9Q8NEX5 89 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 RNASE8Q8TDE3 154 aaKnown RBP3.22□□□□□ -1.89
VPS29-212ENST00000621131 TOMM6Q96B49 74 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 TMEM141Q96I45 108 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 C18orf15Q96N68 181 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 PRADC1Q9BSG0 188 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 WFDC10AQ9H1F0 79 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 HECTD4Q9Y4D8 3996 aa3.22□□□□□ -1.89
VPS29-212ENST00000621131 IGLV2-18A0A075B6J9 118 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 IGHV3-73A0A0B4J1V6 119 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 TRBV10-1A0A0K0K1A3 114 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 TRBV27A0A0K0K1C4 114 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 M0QY20 66 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 IGHV3-53P01767 116 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 MIFP14174 115 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 DDTP30046 118 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 COTL1Q14019 142 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 TMEM97Q5BJF2 176 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 ERASQ7Z444 233 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 PMCHL2Q9BQD1 86 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 PRO1933Q9H354 126 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 NOP10Q9NPE3 64 aaKnown RBP3.21□□□□□ -1.9
VPS29-212ENST00000621131 UQCR10Q9UDW1 63 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 TP53TG1Q9Y2A0 90 aa3.21□□□□□ -1.9
VPS29-212ENST00000621131 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 DNAH9Q9NYC9 4486 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 TRAV12-1A0A0B4J245 112 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 LYRM9A8MSI8 78 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 UBE2L6O14933 153 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 DPM2O94777 84 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 IGKCP01834 107 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 HNRNPA3P51991 378 aaKnown RBP3.2□□□□□ -1.9
VPS29-212ENST00000621131 POLR2KP53803 58 aaKnown RBP3.2□□□□□ -1.9
VPS29-212ENST00000621131 EMP1P54849 157 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 LINC00315P59091 139 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 HERVK_113P61574 105 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 Q6ZTI0 123 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 DAZ4Q86SG3 579 aaKnown RBP3.2□□□□□ -1.9
VPS29-212ENST00000621131 MRPL52Q86TS9 123 aaKnown RBP3.2□□□□□ -1.9
VPS29-212ENST00000621131 ATOH7Q8N100 152 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 ZNF664Q8N3J9 261 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 VSIG2Q96IQ7 327 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 TIMM17AQ99595 171 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 MIEN1Q9BRT3 115 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 DAZ3Q9NR90 486 aaKnown RBP3.2□□□□□ -1.9
VPS29-212ENST00000621131 CHTOPQ9Y3Y2 248 aaKnown RBP3.2□□□□□ -1.9
VPS29-212ENST00000621131 SORL1Q92673 2214 aa3.2□□□□□ -1.9
VPS29-212ENST00000621131 TRBV7-3A0A075B6L6 115 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 A0A087WX48 190 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 A0A096LNJ9 63 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 TRBV6-4A0A1B0GX49 114 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 F8VRH5 84 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 DAD1P61803 113 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 PMVKQ15126 192 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 DEFB135Q30KP9 77 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 UFSP1Q6NVU6 142 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 SLC25A34Q6PIV7 304 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 LINC00173Q6ZV60 143 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 OR11H2Q8NH07 326 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 ZNRF2Q8NHG8 242 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 TMEM101Q96IK0 257 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 C2orf88Q9BSF0 95 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 SPANXA1Q9NS26 97 aa3.19□□□□□ -1.9
VPS29-212ENST00000621131 PANO1I0J062 215 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 PRM2P04554 102 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 SPART-AS1P0CW21 52 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 DEFB130BP0DP73 79 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 DEFB130AP0DP74 79 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 CRYBA4P53673 196 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 AMMECR1LQ6DCA0 310 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 NEGR1Q7Z3B1 354 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 CEND1Q8N111 149 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 Q8N976 141 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 C20orf203Q8NBC4 194 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 BAALCQ8WXS3 180 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 VCX2Q9H322 139 aa3.18□□□□□ -1.9
VPS29-212ENST00000621131 MUC4Q99102 2169 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 TRBV25-1A0A075B6N4 114 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 LINC00587B1AMM8 73 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 M0R143 59 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 ATP5G1P05496 136 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 IGLC3P0DOY3 106 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 NMUP48645 174 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 SEC11AP67812 179 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 EGFEM1PQ0D2K5 195 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 FAM222AQ5U5X8 452 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 SLC25A29Q8N8R3 303 aa3.17□□□□□ -1.9
VPS29-212ENST00000621131 TMEM243Q9BU79 118 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms