RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 CHCHD5Q9BSY4 110 aa14.13□□□□□ -0.15
SDHA-220ENST00000617470 CDKN2A-AS1Q9UH64 79 aa14.13□□□□□ -0.15
SDHA-220ENST00000617470 IGHV3-30-3P0DP02 117 aa14.13□□□□□ -0.15
SDHA-220ENST00000617470 TMEM101Q96IK0 257 aa14.13□□□□□ -0.15
SDHA-220ENST00000617470 TM2D2Q9BX73 214 aa14.13□□□□□ -0.15
SDHA-220ENST00000617470 GEMIN7Q9H840 131 aaKnown RBP14.13□□□□□ -0.15
SDHA-220ENST00000617470 GCSHP23434 173 aa14.12□□□□□ -0.15
SDHA-220ENST00000617470 CEND1Q8N111 149 aa14.12□□□□□ -0.15
SDHA-220ENST00000617470 KLK5Q9Y337 293 aaPredicted RBP14.12□□□□□ -0.15
SDHA-220ENST00000617470 TRAV13-1A0A0B4J241 112 aa14.11□□□□□ -0.15
SDHA-220ENST00000617470 LGALS3P17931 250 aaKnown RBP14.11□□□□□ -0.15
SDHA-220ENST00000617470 TAL2Q16559 108 aa14.11□□□□□ -0.15
SDHA-220ENST00000617470 IGHV1-58A0A0C4DH39 117 aa14.11□□□□□ -0.15
SDHA-220ENST00000617470 SPINK8P0C7L1 97 aa14.11□□□□□ -0.15
SDHA-220ENST00000617470 SCGB1D4Q6XE38 83 aa14.09□□□□□ -0.15
SDHA-220ENST00000617470 HERVK_113P63121 156 aa14.09□□□□□ -0.15
SDHA-220ENST00000617470 HIST1H4GQ99525 98 aa14.09□□□□□ -0.15
SDHA-220ENST00000617470 ICOSQ9Y6W8 199 aa14.09□□□□□ -0.15
SDHA-220ENST00000617470 UBE2V1Q13404 147 aa14.08□□□□□ -0.16
SDHA-220ENST00000617470 CCL25O15444 150 aa14.07□□□□□ -0.16
SDHA-220ENST00000617470 A6NDN8 102 aa14.07□□□□□ -0.16
SDHA-220ENST00000617470 H3BNG1 76 aa14.07□□□□□ -0.16
SDHA-220ENST00000617470 C10orf126Q8N4M7 172 aa14.07□□□□□ -0.16
SDHA-220ENST00000617470 CSMD3Q7Z407 3707 aa14.07□□□□□ -0.16
SDHA-220ENST00000617470 PTTG1IPP53801 180 aa14.06□□□□□ -0.16
SDHA-220ENST00000617470 MRPL23Q16540 153 aaKnown RBP14.06□□□□□ -0.16
SDHA-220ENST00000617470 C15orf53Q8NAA6 179 aa14.06□□□□□ -0.16
SDHA-220ENST00000617470 IGLV5-39A0A0G2JS06 123 aa14.04□□□□□ -0.16
SDHA-220ENST00000617470 C3orf84H3BNL1 204 aa14.04□□□□□ -0.16
SDHA-220ENST00000617470 H3BRM9 83 aa14.04□□□□□ -0.16
SDHA-220ENST00000617470 RBX1P62877 108 aa14.04□□□□□ -0.16
SDHA-220ENST00000617470 VAMP3Q15836 100 aa14.04□□□□□ -0.16
SDHA-220ENST00000617470 A0A1B0GUV1 79 aa14.03□□□□□ -0.16
SDHA-220ENST00000617470 CASC10Q5T4H9 136 aa14.03□□□□□ -0.16
SDHA-220ENST00000617470 SMIM1B2RUZ4 78 aa14.03□□□□□ -0.16
SDHA-220ENST00000617470 SPANXB1Q9NS25 103 aaPredicted RBP14.03□□□□□ -0.16
SDHA-220ENST00000617470 K7ERJ3 54 aa14.02□□□□□ -0.16
SDHA-220ENST00000617470 STARD9Q9P2P6 4700 aa14.02□□□□□ -0.17
SDHA-220ENST00000617470 A0A0J9YXY3 114 aa14.02□□□□□ -0.17
SDHA-220ENST00000617470 TMEM262E9PQX1 116 aa14.02□□□□□ -0.17
SDHA-220ENST00000617470 APLNQ9ULZ1 77 aa14.02□□□□□ -0.17
SDHA-220ENST00000617470 IGKV3OR2-268A0A0C4DH90 116 aa14.01□□□□□ -0.17
SDHA-220ENST00000617470 NHP2Q9NX24 153 aaKnown RBP14.01□□□□□ -0.17
SDHA-220ENST00000617470 NDUFA12Q9UI09 145 aa14.01□□□□□ -0.17
SDHA-220ENST00000617470 SRSF9Q13242 221 aaKnown RBP eCLIP14□□□□□ -0.17
SDHA-220ENST00000617470 Q8N3U1 123 aa14□□□□□ -0.17
SDHA-220ENST00000617470 IGHV3-30P01768 117 aa13.99□□□□□ -0.17
SDHA-220ENST00000617470 SMIM13P0DJ93 91 aa13.99□□□□□ -0.17
SDHA-220ENST00000617470 IGHV3-30-5P0DP03 117 aa13.99□□□□□ -0.17
SDHA-220ENST00000617470 SH2D6Q7Z4S9 175 aa13.99□□□□□ -0.17
SDHA-220ENST00000617470 RAB37Q96AX2 223 aa13.99□□□□□ -0.17
SDHA-220ENST00000617470 DYNC2H1Q8NCM8 4307 aaKnown RBP13.99□□□□□ -0.17
SDHA-220ENST00000617470 LINC00959A0A1B0GUT2 108 aa13.98□□□□□ -0.17
SDHA-220ENST00000617470 LITAFQ99732 161 aa13.98□□□□□ -0.17
SDHA-220ENST00000617470 IGHV3OR16-9A0A0B4J2B5 98 aa13.97□□□□□ -0.17
SDHA-220ENST00000617470 A0A1B0GWB2 263 aa13.97□□□□□ -0.17
SDHA-220ENST00000617470 C9orf118A6NHY6 69 aa13.97□□□□□ -0.17
SDHA-220ENST00000617470 NAA38Q9BRA0 125 aaKnown RBP13.96□□□□□ -0.17
SDHA-220ENST00000617470 TENM2Q9NT68 2774 aa13.96□□□□□ -0.17
SDHA-220ENST00000617470 NDUFA1O15239 70 aa13.96□□□□□ -0.18
SDHA-220ENST00000617470 ESRGQ1W209 222 aa13.96□□□□□ -0.18
SDHA-220ENST00000617470 LELP1Q5T871 98 aa13.96□□□□□ -0.18
SDHA-220ENST00000617470 LYPD5Q6UWN5 251 aa13.96□□□□□ -0.18
SDHA-220ENST00000617470 CCL18P55774 89 aa13.94□□□□□ -0.18
SDHA-220ENST00000617470 ADAMTSL4-AS1Q5T5F5 129 aa13.94□□□□□ -0.18
SDHA-220ENST00000617470 CLPSL2Q6UWE3 100 aa13.94□□□□□ -0.18
SDHA-220ENST00000617470 PLECQ15149 4684 aaKnown RBP13.93□□□□□ -0.18
SDHA-220ENST00000617470 H3BUT2 72 aa13.93□□□□□ -0.18
SDHA-220ENST00000617470 UBE2DNLQ8IWF7 75 aa13.92□□□□□ -0.18
SDHA-220ENST00000617470 TMEM238C9JI98 176 aa13.92□□□□□ -0.18
SDHA-220ENST00000617470 LINC00269Q8N2A0 174 aa13.92□□□□□ -0.18
SDHA-220ENST00000617470 ZNF625Q96I27 306 aaPredicted RBP13.91□□□□□ -0.18
SDHA-220ENST00000617470 Q9H8V8 135 aa13.91□□□□□ -0.18
SDHA-220ENST00000617470 A0A087WZ39 114 aa13.91□□□□□ -0.18
SDHA-220ENST00000617470 LINC00588Q9Y4M8 146 aa13.91□□□□□ -0.18
SDHA-220ENST00000617470 MUSTN1Q8IVN3 82 aa13.9□□□□□ -0.18
SDHA-220ENST00000617470 C5orf38Q86SI9 138 aa13.89□□□□□ -0.19
SDHA-220ENST00000617470 TMEM238LA0A1B0GVL6 79 aa13.89□□□□□ -0.19
SDHA-220ENST00000617470 A6NJY4 79 aa13.89□□□□□ -0.19
SDHA-220ENST00000617470 ANGP03950 147 aaKnown RBP13.89□□□□□ -0.19
SDHA-220ENST00000617470 XCL1P47992 114 aa13.89□□□□□ -0.19
SDHA-220ENST00000617470 SS18Q15532 418 aa13.89□□□□□ -0.19
SDHA-220ENST00000617470 SPANXDQ9BXN6 97 aa13.89□□□□□ -0.19
SDHA-220ENST00000617470 SPANXCQ9NY87 97 aa13.89□□□□□ -0.19
SDHA-220ENST00000617470 EIF4EBP3O60516 100 aaPredicted RBP13.87□□□□□ -0.19
SDHA-220ENST00000617470 TIMM17BO60830 172 aa13.87□□□□□ -0.19
SDHA-220ENST00000617470 REG3AQ06141 175 aa13.87□□□□□ -0.19
SDHA-220ENST00000617470 A0A1W2PPM0 123 aa13.87□□□□□ -0.19
SDHA-220ENST00000617470 CFC1BP0CG36 223 aa13.87□□□□□ -0.19
SDHA-220ENST00000617470 CFC1P0CG37 223 aa13.87□□□□□ -0.19
SDHA-220ENST00000617470 A4D1N5 150 aa13.86□□□□□ -0.19
SDHA-220ENST00000617470 GAGE10A6NGK3 116 aa13.86□□□□□ -0.19
SDHA-220ENST00000617470 MIAQ16674 131 aa13.86□□□□□ -0.19
SDHA-220ENST00000617470 COX7B2Q8TF08 81 aa13.86□□□□□ -0.19
SDHA-220ENST00000617470 LYSTQ99698 3801 aa13.86□□□□□ -0.19
SDHA-220ENST00000617470 APOMO95445 188 aa13.85□□□□□ -0.19
SDHA-220ENST00000617470 GTF2H5Q6ZYL4 71 aa13.85□□□□□ -0.19
SDHA-220ENST00000617470 K7EP34 96 aa13.84□□□□□ -0.19
SDHA-220ENST00000617470 LY6G6CO95867 125 aa13.83□□□□□ -0.19
SDHA-220ENST00000617470 WFDC10BQ8IUB3 73 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms