RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 HAMPP81172 84 aa1.41□□□□□ -2.18
RFC3-203ENST00000616236 UBE2DNLQ8IWF7 75 aa1.41□□□□□ -2.18
RFC3-203ENST00000616236 NRXN1Q9ULB1 1477 aa1.41□□□□□ -2.18
RFC3-203ENST00000616236 ZNF462Q96JM2 2506 aa1.4□□□□□ -2.18
RFC3-203ENST00000616236 UNC13BO14795 1591 aa1.4□□□□□ -2.19
RFC3-203ENST00000616236 FAM103A1Q9BTL3 118 aaKnown RBP1.4□□□□□ -2.19
RFC3-203ENST00000616236 ZNF815PA8K554 130 aa1.39□□□□□ -2.19
RFC3-203ENST00000616236 K7EP34 96 aa1.39□□□□□ -2.19
RFC3-203ENST00000616236 PYY3Q5JQD4 70 aa1.39□□□□□ -2.19
RFC3-203ENST00000616236 Q6JHZ5 121 aa1.39□□□□□ -2.19
RFC3-203ENST00000616236 C10orf95Q9H7T3 257 aa1.39□□□□□ -2.19
RFC3-203ENST00000616236 C7orf77A4D0Y5 90 aa1.38□□□□□ -2.19
RFC3-203ENST00000616236 ZFHX3Q15911 3703 aa1.38□□□□□ -2.19
RFC3-203ENST00000616236 MYH4Q9Y623 1939 aa1.38□□□□□ -2.19
RFC3-203ENST00000616236 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
RFC3-203ENST00000616236 FANCAO15360 1455 aa1.37□□□□□ -2.19
RFC3-203ENST00000616236 MED14O60244 1454 aa1.37□□□□□ -2.19
RFC3-203ENST00000616236 ATP10BO94823 1461 aa1.37□□□□□ -2.19
RFC3-203ENST00000616236 EPRSP07814 1512 aaKnown RBP1.37□□□□□ -2.19
RFC3-203ENST00000616236 FDCSPQ8NFU4 85 aa1.37□□□□□ -2.19
RFC3-203ENST00000616236 HIGD1BQ9P298 99 aa1.37□□□□□ -2.19
RFC3-203ENST00000616236 CEP162Q5TB80 1403 aa1.37□□□□□ -2.19
RFC3-203ENST00000616236 EDC4Q6P2E9 1401 aaKnown RBP1.37□□□□□ -2.19
RFC3-203ENST00000616236 LRP6O75581 1613 aa1.37□□□□□ -2.19
RFC3-203ENST00000616236 A0A087WVE0 104 aa1.36□□□□□ -2.19
RFC3-203ENST00000616236 SSBP3-AS1Q7Z2R9 100 aa1.36□□□□□ -2.19
RFC3-203ENST00000616236 UBR1Q8IWV7 1749 aa1.36□□□□□ -2.19
RFC3-203ENST00000616236 TMEM263Q8WUH6 116 aaKnown RBP1.36□□□□□ -2.19
RFC3-203ENST00000616236 PPLO60437 1756 aa1.36□□□□□ -2.19
RFC3-203ENST00000616236 MYO3AQ8NEV4 1616 aa1.36□□□□□ -2.19
RFC3-203ENST00000616236 C10orf113Q5VZT2 155 aa1.35□□□□□ -2.19
RFC3-203ENST00000616236 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
RFC3-203ENST00000616236 CYB5AP00167 134 aa1.34□□□□□ -2.19
RFC3-203ENST00000616236 S100A16Q96FQ6 103 aaKnown RBP1.34□□□□□ -2.19
RFC3-203ENST00000616236 CCDC18Q5T9S5 1454 aa1.34□□□□□ -2.19
RFC3-203ENST00000616236 KNDC1Q76NI1 1749 aa1.34□□□□□ -2.2
RFC3-203ENST00000616236 NLRP1Q9C000 1473 aa1.33□□□□□ -2.2
RFC3-203ENST00000616236 F8WEM9 126 aa1.33□□□□□ -2.2
RFC3-203ENST00000616236 PRB3Q04118 309 aaPredicted RBP1.33□□□□□ -2.2
RFC3-203ENST00000616236 ETDBQ3ZM63 59 aa1.33□□□□□ -2.2
RFC3-203ENST00000616236 ZNF720Q7Z2F6 126 aa1.33□□□□□ -2.2
RFC3-203ENST00000616236 LINC00846Q9NV44 126 aa1.33□□□□□ -2.2
RFC3-203ENST00000616236 DNAJC13O75165 2243 aa1.33□□□□□ -2.2
RFC3-203ENST00000616236 ABCC2Q92887 1545 aa1.33□□□□□ -2.2
RFC3-203ENST00000616236 ERCC6L2Q5T890 1561 aa1.33□□□□□ -2.2
RFC3-203ENST00000616236 POLA1P09884 1462 aaPredicted RBP1.32□□□□□ -2.2
RFC3-203ENST00000616236 LCN9Q8WX39 176 aa1.32□□□□□ -2.2
RFC3-203ENST00000616236 PLIN4Q96Q06 1357 aa1.32□□□□□ -2.2
RFC3-203ENST00000616236 C1orf167Q5SNV9 1468 aa1.31□□□□□ -2.2
RFC3-203ENST00000616236 ARMS2P0C7Q2 107 aa1.31□□□□□ -2.2
RFC3-203ENST00000616236 PEA15Q15121 130 aa1.31□□□□□ -2.2
RFC3-203ENST00000616236 LINC01600Q96MT4 127 aa1.31□□□□□ -2.2
RFC3-203ENST00000616236 PSENENQ9NZ42 101 aa1.31□□□□□ -2.2
RFC3-203ENST00000616236 LAMC1P11047 1609 aa1.3□□□□□ -2.2
RFC3-203ENST00000616236 BCE1O60756 84 aa1.3□□□□□ -2.2
RFC3-203ENST00000616236 SPINK7P58062 85 aa1.3□□□□□ -2.2
RFC3-203ENST00000616236 TRBV6-1A0A0K0K1D8 114 aa1.29□□□□□ -2.2
RFC3-203ENST00000616236 TDRG1Q3Y452 100 aa1.29□□□□□ -2.2
RFC3-203ENST00000616236 AHCTF1Q8WYP5 2266 aa1.29□□□□□ -2.2
RFC3-203ENST00000616236 UACAQ9BZF9 1416 aa1.29□□□□□ -2.2
RFC3-203ENST00000616236 TRIOBPQ9H2D6 2365 aa1.28□□□□□ -2.2
RFC3-203ENST00000616236 SMIM11AP58511 58 aa1.28□□□□□ -2.2
RFC3-203ENST00000616236 DEFB107AQ8IZN7 70 aa1.28□□□□□ -2.2
RFC3-203ENST00000616236 KIF14Q15058 1648 aa1.28□□□□□ -2.2
RFC3-203ENST00000616236 SHPRHQ149N8 1683 aa1.28□□□□□ -2.2
RFC3-203ENST00000616236 PAPPA2Q9BXP8 1791 aa1.27□□□□□ -2.21
RFC3-203ENST00000616236 XRN1Q8IZH2 1706 aaKnown RBP1.27□□□□□ -2.21
RFC3-203ENST00000616236 IQSEC2Q5JU85 1478 aa1.27□□□□□ -2.21
RFC3-203ENST00000616236 H3BQF6 201 aa1.27□□□□□ -2.21
RFC3-203ENST00000616236 S100A3P33764 101 aa1.27□□□□□ -2.21
RFC3-203ENST00000616236 COX6A2Q02221 97 aa1.27□□□□□ -2.21
RFC3-203ENST00000616236 HMGN3Q15651 99 aa1.27□□□□□ -2.21
RFC3-203ENST00000616236 ARHGAP35Q9NRY4 1499 aa1.26□□□□□ -2.21
RFC3-203ENST00000616236 LEPROTL1O95214 131 aa1.26□□□□□ -2.21
RFC3-203ENST00000616236 FAM208BQ5VWN6 2430 aa1.26□□□□□ -2.21
RFC3-203ENST00000616236 SUPT6HQ7KZ85 1726 aaKnown RBP1.26□□□□□ -2.21
RFC3-203ENST00000616236 TARBP1Q13395 1621 aaKnown RBP1.26□□□□□ -2.21
RFC3-203ENST00000616236 D6R8Y8 96 aa1.25□□□□□ -2.21
RFC3-203ENST00000616236 MUSTN1Q8IVN3 82 aa1.25□□□□□ -2.21
RFC3-203ENST00000616236 RABAC1Q9UI14 185 aa1.25□□□□□ -2.21
RFC3-203ENST00000616236 CRYBG1Q9Y4K1 1723 aa1.25□□□□□ -2.21
RFC3-203ENST00000616236 ANKRD36A6QL64 1941 aa1.25□□□□□ -2.21
RFC3-203ENST00000616236 MEGF8Q7Z7M0 2845 aa1.24□□□□□ -2.21
RFC3-203ENST00000616236 C5P01031 1676 aa1.24□□□□□ -2.21
RFC3-203ENST00000616236 H0Y9P7 68 aa1.24□□□□□ -2.21
RFC3-203ENST00000616236 HMGN2P05204 90 aaKnown RBP1.24□□□□□ -2.21
RFC3-203ENST00000616236 SPATA8Q6RVD6 105 aa1.24□□□□□ -2.21
RFC3-203ENST00000616236 MAP3K4Q9Y6R4 1608 aa1.24□□□□□ -2.21
RFC3-203ENST00000616236 KCPQ6ZWJ8 1503 aa1.24□□□□□ -2.21
RFC3-203ENST00000616236 MAGI2Q86UL8 1455 aa1.24□□□□□ -2.21
RFC3-203ENST00000616236 CACNA1HO95180 2353 aa1.23□□□□□ -2.21
RFC3-203ENST00000616236 NHSL1Q5SYE7 1610 aa1.23□□□□□ -2.21
RFC3-203ENST00000616236 A0A0D9SFI3 127 aa1.23□□□□□ -2.21
RFC3-203ENST00000616236 PLAC8Q9NZF1 115 aa1.23□□□□□ -2.21
RFC3-203ENST00000616236 NEXMIFQ5QGS0 1516 aa1.23□□□□□ -2.21
RFC3-203ENST00000616236 CUX1P39880 1505 aa1.22□□□□□ -2.21
RFC3-203ENST00000616236 GNGT1P63211 74 aa1.22□□□□□ -2.21
RFC3-203ENST00000616236 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
RFC3-203ENST00000616236 CNFNQ9BYD5 112 aa1.22□□□□□ -2.21
RFC3-203ENST00000616236 SPCS1Q9Y6A9 102 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms