RNA–Protein interactions for RNA: ENST00000615947.1

LINC00598-206, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 3,541 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-206ENST00000615947 SPTSSBQ8NFR3 76 aa4.17□□□□□ -1.74
LINC00598-206ENST00000615947 TTTY13Q9BZ97 58 aa4.17□□□□□ -1.74
LINC00598-206ENST00000615947 TRAV8-3A0A0A6YYJ7 113 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 IGHV7-4-1A0A0J9YVY3 117 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 IGHV4-31P0DP07 118 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 RIGQ13278 110 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 M0R378 163 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 SOCS3O14543 225 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 CFHR3Q02985 330 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 C20orf197Q8N268 126 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 ZFAND2AQ8N6M9 145 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
LINC00598-206ENST00000615947 A8MUN3 132 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 HTN1P15515 57 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 KRTAP1-3Q8IUG1 177 aa4.16□□□□□ -1.74
LINC00598-206ENST00000615947 TRBV7-3A0A075B6L6 115 aa4.15□□□□□ -1.74
LINC00598-206ENST00000615947 TRBV25-1A0A075B6N4 114 aa4.15□□□□□ -1.74
LINC00598-206ENST00000615947 TRAV12-1A0A0B4J245 112 aa4.15□□□□□ -1.74
LINC00598-206ENST00000615947 ZNF22P17026 224 aaPredicted RBP4.15□□□□□ -1.74
LINC00598-206ENST00000615947 FUSP35637 526 aaKnown RBP eCLIP4.15□□□□□ -1.74
LINC00598-206ENST00000615947 CRIP2P52943 208 aaPredicted RBP4.15□□□□□ -1.74
LINC00598-206ENST00000615947 SMR3AQ99954 134 aa4.15□□□□□ -1.74
LINC00598-206ENST00000615947 TM2D3Q9BRN9 247 aa4.15□□□□□ -1.74
LINC00598-206ENST00000615947 FBN1P35555 2871 aaKnown RBP4.15□□□□□ -1.74
LINC00598-206ENST00000615947 CMYA5Q8N3K9 4069 aa4.15□□□□□ -1.74
LINC00598-206ENST00000615947 IGHV4OR15-8A0A075B7B6 117 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 A0A087WW49 117 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 FAM223BA6NKX1 122 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 H7C2G1 150 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 SLURP1P55000 103 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 C14orf178Q8N769 122 aaPredicted RBP4.15□□□□□ -1.75
LINC00598-206ENST00000615947 DKK2Q9UBU2 259 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 P0DMU3 169 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 FAM231AP0DMU4 169 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 FAM231CP0DMU5 169 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 Q1RN00 199 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 C2orf82Q6UX34 121 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 LINC00643Q86TS7 51 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 ORMDL3Q8N138 153 aa4.15□□□□□ -1.75
LINC00598-206ENST00000615947 RPL39LQ96EH5 51 aaKnown RBP4.15□□□□□ -1.75
LINC00598-206ENST00000615947 PKD1L1Q8TDX9 2849 aa4.14□□□□□ -1.75
LINC00598-206ENST00000615947 TRAV12-3A0A0B4J271 114 aa4.14□□□□□ -1.75
LINC00598-206ENST00000615947 TRBV7-6A0A0J9YX20 115 aa4.14□□□□□ -1.75
LINC00598-206ENST00000615947 NDUFA4O00483 81 aa4.14□□□□□ -1.75
LINC00598-206ENST00000615947 COX7A2LO14548 114 aa4.14□□□□□ -1.75
LINC00598-206ENST00000615947 FHL2Q14192 279 aa4.14□□□□□ -1.75
LINC00598-206ENST00000615947 DEFB113Q30KQ7 82 aa4.14□□□□□ -1.75
LINC00598-206ENST00000615947 C9orf47Q6ZRZ4 202 aa4.14□□□□□ -1.75
LINC00598-206ENST00000615947 TRBV27A0A0K0K1C4 114 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 SPANXN1Q5VSR9 72 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 ZNF702PQ9H963 129 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 LST1O00453 97 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 HBDP02042 147 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 NSD1Q96L73 2696 aaPredicted RBP4.13□□□□□ -1.75
LINC00598-206ENST00000615947 NXPH4O95158 308 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 CCKP06307 115 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 RNASE3P12724 160 aaKnown RBP4.13□□□□□ -1.75
LINC00598-206ENST00000615947 SPINK13Q1W4C9 94 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 NRACQ8N912 160 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 USMG5Q96IX5 58 aa4.13□□□□□ -1.75
LINC00598-206ENST00000615947 A0A087WZ39 114 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 Q6YL49 198 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 S100A4P26447 101 aaKnown RBP4.12□□□□□ -1.75
LINC00598-206ENST00000615947 MP68P56378 58 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 UBE2D3P61077 147 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 UBE2D2P62837 147 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 IGKV2D-26A0A0A0MRZ7 120 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.12□□□□□ -1.75
LINC00598-206ENST00000615947 MED14OSP0DP75 135 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 GYPEP15421 78 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 UBE2D1P51668 147 aa4.12□□□□□ -1.75
LINC00598-206ENST00000615947 IGHV3-73A0A0B4J1V6 119 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 MGPP08493 103 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 RHOHQ15669 191 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 FAM74A4Q5TZK3 123 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 PLA2G1BP04054 148 aaKnown RBP4.11□□□□□ -1.75
LINC00598-206ENST00000615947 PROK1P58294 105 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 Q8N8P6 123 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 SLC25A29Q8N8R3 303 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 NKAPP1Q8N9T2 125 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 MYOZ3Q8TDC0 251 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 VSIG2Q96IQ7 327 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 X6R8D5 127 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 PRSS1P07477 247 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 LCA10Q71F78 164 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 PHLDA3Q9Y5J5 127 aa4.11□□□□□ -1.75
LINC00598-206ENST00000615947 FSHBP01225 129 aa4.1□□□□□ -1.75
LINC00598-206ENST00000615947 ACYP1P07311 99 aa4.1□□□□□ -1.75
LINC00598-206ENST00000615947 ZNF876PQ49A33 203 aa4.1□□□□□ -1.75
LINC00598-206ENST00000615947 IFI27L1Q96BM0 104 aa4.1□□□□□ -1.75
LINC00598-206ENST00000615947 HUWE1Q7Z6Z7 4374 aaKnown RBP4.1□□□□□ -1.75
LINC00598-206ENST00000615947 MRPS36P82909 103 aaKnown RBP4.1□□□□□ -1.75
LINC00598-206ENST00000615947 ATXN8Q156A1 80 aa4.1□□□□□ -1.75
LINC00598-206ENST00000615947 DSCR9P59020 149 aa4.09□□□□□ -1.75
LINC00598-206ENST00000615947 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
LINC00598-206ENST00000615947 C5orf38Q86SI9 138 aa4.09□□□□□ -1.75
LINC00598-206ENST00000615947 AMELXQ99217 191 aa4.09□□□□□ -1.75
LINC00598-206ENST00000615947 UPK3BQ9BT76 320 aa4.09□□□□□ -1.75
LINC00598-206ENST00000615947 SUMO2P61956 95 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms