RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 LOC100131303A0A0U1RQF7 123 aa12.22□□□□□ -0.45
NEK3-206ENST00000611833 HILS1P60008 231 aa12.22□□□□□ -0.45
NEK3-206ENST00000611833 LINC00308Q8TCZ7 52 aa12.22□□□□□ -0.45
NEK3-206ENST00000611833 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
NEK3-206ENST00000611833 NTN5Q8WTR8 489 aaPredicted RBP12.22□□□□□ -0.45
NEK3-206ENST00000611833 TRBV6-4A0A1B0GX49 114 aa12.21□□□□□ -0.45
NEK3-206ENST00000611833 MEIG1Q5JSS6 88 aa12.21□□□□□ -0.45
NEK3-206ENST00000611833 CSNK1G2-AS1Q8NCQ2 148 aa12.21□□□□□ -0.45
NEK3-206ENST00000611833 OVOL2Q9BRP0 275 aa12.21□□□□□ -0.46
NEK3-206ENST00000611833 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
NEK3-206ENST00000611833 J3QKU1 62 aa12.2□□□□□ -0.46
NEK3-206ENST00000611833 CIDEAO60543 219 aa12.2□□□□□ -0.46
NEK3-206ENST00000611833 MT-ATP8P03928 68 aa12.2□□□□□ -0.46
NEK3-206ENST00000611833 CLEC2BQ92478 149 aa12.2□□□□□ -0.46
NEK3-206ENST00000611833 F5H768 121 aa12.2□□□□□ -0.46
NEK3-206ENST00000611833 XGP55808 180 aa12.2□□□□□ -0.46
NEK3-206ENST00000611833 COPS9Q8WXC6 57 aa12.2□□□□□ -0.46
NEK3-206ENST00000611833 C2orf82Q6UX34 121 aa12.19□□□□□ -0.46
NEK3-206ENST00000611833 SMR3AQ99954 134 aa12.19□□□□□ -0.46
NEK3-206ENST00000611833 H7C423 109 aa12.17□□□□□ -0.46
NEK3-206ENST00000611833 HERV-K104P63124 156 aa12.17□□□□□ -0.46
NEK3-206ENST00000611833 GAGE6Q13070 117 aa12.17□□□□□ -0.46
NEK3-206ENST00000611833 LINC01600Q96MT4 127 aa12.17□□□□□ -0.46
NEK3-206ENST00000611833 IGKV3OR2-268A0A0C4DH90 116 aa12.16□□□□□ -0.46
NEK3-206ENST00000611833 TEX49A0A1B0GTD5 131 aa12.16□□□□□ -0.46
NEK3-206ENST00000611833 LST1O00453 97 aa12.16□□□□□ -0.46
NEK3-206ENST00000611833 UNC79Q9P2D8 2635 aa12.16□□□□□ -0.46
NEK3-206ENST00000611833 HELZ2Q9BYK8 2649 aaKnown RBP12.15□□□□□ -0.46
NEK3-206ENST00000611833 FHL2Q14192 279 aa12.15□□□□□ -0.46
NEK3-206ENST00000611833 SOSTDC1Q6X4U4 206 aa12.15□□□□□ -0.46
NEK3-206ENST00000611833 UBE2WQ96B02 151 aa12.15□□□□□ -0.46
NEK3-206ENST00000611833 C2CD3Q4AC94 2353 aa12.15□□□□□ -0.46
NEK3-206ENST00000611833 H3BT86 120 aa12.15□□□□□ -0.46
NEK3-206ENST00000611833 KRTAP10-3P60369 221 aa12.15□□□□□ -0.46
NEK3-206ENST00000611833 A0A1B0GV72 72 aa12.14□□□□□ -0.47
NEK3-206ENST00000611833 CHCHD5Q9BSY4 110 aa12.14□□□□□ -0.47
NEK3-206ENST00000611833 TRBV6-8A0A0A6YYG3 113 aa12.14□□□□□ -0.47
NEK3-206ENST00000611833 PF4P02776 101 aa12.12□□□□□ -0.47
NEK3-206ENST00000611833 DEFB130BP0DP73 79 aa12.12□□□□□ -0.47
NEK3-206ENST00000611833 DEFB130AP0DP74 79 aa12.12□□□□□ -0.47
NEK3-206ENST00000611833 COX7B2Q8TF08 81 aa12.12□□□□□ -0.47
NEK3-206ENST00000611833 TOMM7Q9P0U1 55 aa12.12□□□□□ -0.47
NEK3-206ENST00000611833 KMT2BQ9UMN6 2715 aaPredicted RBP12.12□□□□□ -0.47
NEK3-206ENST00000611833 IGLV4-60A0A075B6I1 120 aa12.11□□□□□ -0.47
NEK3-206ENST00000611833 CKS1BP61024 79 aa12.11□□□□□ -0.47
NEK3-206ENST00000611833 TRAV8-4A0A0B4J246 113 aa12.11□□□□□ -0.47
NEK3-206ENST00000611833 COX7A2LO14548 114 aa12.09□□□□□ -0.47
NEK3-206ENST00000611833 CRLF1O75462 422 aa12.09□□□□□ -0.47
NEK3-206ENST00000611833 FASNP49327 2511 aaKnown RBP12.09□□□□□ -0.47
NEK3-206ENST00000611833 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
NEK3-206ENST00000611833 SHISA2Q6UWI4 295 aa12.08□□□□□ -0.48
NEK3-206ENST00000611833 LINC00482Q8N8I6 264 aa12.08□□□□□ -0.48
NEK3-206ENST00000611833 KIR2DL5BQ8NHK3 375 aa12.06□□□□□ -0.48
NEK3-206ENST00000611833 MIR7-3HGQ8N6C7 128 aa12.06□□□□□ -0.48
NEK3-206ENST00000611833 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
NEK3-206ENST00000611833 SNCGO76070 127 aa12.05□□□□□ -0.48
NEK3-206ENST00000611833 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
NEK3-206ENST00000611833 LY6G6DO95868 133 aa12.05□□□□□ -0.48
NEK3-206ENST00000611833 GYPEP15421 78 aa12.05□□□□□ -0.48
NEK3-206ENST00000611833 LINC00158P58513 81 aa12.05□□□□□ -0.48
NEK3-206ENST00000611833 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
NEK3-206ENST00000611833 A0A087WZ39 114 aa12.03□□□□□ -0.48
NEK3-206ENST00000611833 TRAV13-2A0A0B4J235 113 aa12.03□□□□□ -0.48
NEK3-206ENST00000611833 SPATA3Q8NHX4 192 aa12.03□□□□□ -0.48
NEK3-206ENST00000611833 CRPP02741 224 aa12.03□□□□□ -0.48
NEK3-206ENST00000611833 SND1-IT1Q9HBX3 110 aa12.03□□□□□ -0.48
NEK3-206ENST00000611833 LINC00959A0A1B0GUT2 108 aa12.02□□□□□ -0.49
NEK3-206ENST00000611833 LINC00612Q8N6U2 182 aa12.02□□□□□ -0.49
NEK3-206ENST00000611833 CITED1Q99966 193 aa12.02□□□□□ -0.49
NEK3-206ENST00000611833 X6R8D5 127 aa12.02□□□□□ -0.49
NEK3-206ENST00000611833 DEFB121Q5J5C9 76 aa12□□□□□ -0.49
NEK3-206ENST00000611833 SMIM9A6NGZ8 99 aa12□□□□□ -0.49
NEK3-206ENST00000611833 GAGE2BQ13066 116 aa12□□□□□ -0.49
NEK3-206ENST00000611833 GAGE2EQ4V326 116 aa12□□□□□ -0.49
NEK3-206ENST00000611833 FAM222AQ5U5X8 452 aa12□□□□□ -0.49
NEK3-206ENST00000611833 GAGE2DQ9UEU5 116 aa12□□□□□ -0.49
NEK3-206ENST00000611833 VWFP04275 2813 aa12□□□□□ -0.49
NEK3-206ENST00000611833 TRACP01848 142 aa11.99□□□□□ -0.49
NEK3-206ENST00000611833 PFN2P35080 140 aa11.99□□□□□ -0.49
NEK3-206ENST00000611833 C15orf53Q8NAA6 179 aa11.99□□□□□ -0.49
NEK3-206ENST00000611833 PRO0255Q9UI72 69 aa11.99□□□□□ -0.49
NEK3-206ENST00000611833 FN1P02751 2386 aaKnown RBP11.99□□□□□ -0.49
NEK3-206ENST00000611833 A0A096LPF7 62 aa11.99□□□□□ -0.49
NEK3-206ENST00000611833 IBA57-AS1B1ANH7 110 aa11.99□□□□□ -0.49
NEK3-206ENST00000611833 LINC00337Q8N6G1 96 aa11.99□□□□□ -0.49
NEK3-206ENST00000611833 XCL1P47992 114 aa11.98□□□□□ -0.49
NEK3-206ENST00000611833 SS18Q15532 418 aa11.98□□□□□ -0.49
NEK3-206ENST00000611833 C6orf226Q5I0X4 101 aa11.98□□□□□ -0.49
NEK3-206ENST00000611833 IGKV2-28A0A075B6P5 120 aa11.98□□□□□ -0.49
NEK3-206ENST00000611833 IGKV2D-28P01615 120 aa11.98□□□□□ -0.49
NEK3-206ENST00000611833 RPL28P46779 137 aaKnown RBP11.98□□□□□ -0.49
NEK3-206ENST00000611833 C11orf68Q9H3H3 251 aaKnown RBP11.98□□□□□ -0.49
NEK3-206ENST00000611833 GCN1Q92616 2671 aaKnown RBP11.97□□□□□ -0.49
NEK3-206ENST00000611833 CCL18P55774 89 aa11.97□□□□□ -0.49
NEK3-206ENST00000611833 FAM218AQ96MZ4 157 aa11.97□□□□□ -0.49
NEK3-206ENST00000611833 OTOGQ6ZRI0 2925 aa11.97□□□□□ -0.49
NEK3-206ENST00000611833 A0A1B0GUV1 79 aa11.97□□□□□ -0.49
NEK3-206ENST00000611833 FAM240AA0A1B0GVK7 77 aa11.97□□□□□ -0.49
NEK3-206ENST00000611833 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
NEK3-206ENST00000611833 INAFM1C9JVW0 142 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms