RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 C16orf74Q96GX8 76 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 COX7A2LO14548 114 aa4.97□□□□□ -1.61
SYNPO2-206ENST00000610556 ODF3L2Q3SX64 289 aa4.97□□□□□ -1.61
SYNPO2-206ENST00000610556 LINC00242Q5T6M2 205 aa4.97□□□□□ -1.61
SYNPO2-206ENST00000610556 TIRAPP58753 221 aa4.97□□□□□ -1.61
SYNPO2-206ENST00000610556 DAD1P61803 113 aa4.97□□□□□ -1.61
SYNPO2-206ENST00000610556 VPS13CQ709C8 3753 aa4.97□□□□□ -1.61
SYNPO2-206ENST00000610556 AMELXQ99217 191 aa4.97□□□□□ -1.61
SYNPO2-206ENST00000610556 OVOL2Q9BRP0 275 aa4.97□□□□□ -1.61
SYNPO2-206ENST00000610556 BRI3O95415 125 aa4.96□□□□□ -1.61
SYNPO2-206ENST00000610556 SPANXDQ9BXN6 97 aa4.96□□□□□ -1.61
SYNPO2-206ENST00000610556 SPANXCQ9NY87 97 aa4.96□□□□□ -1.61
SYNPO2-206ENST00000610556 LST1O00453 97 aa4.96□□□□□ -1.62
SYNPO2-206ENST00000610556 SLPIP03973 132 aa4.96□□□□□ -1.62
SYNPO2-206ENST00000610556 C14orf132Q9NPU4 83 aa4.96□□□□□ -1.62
SYNPO2-206ENST00000610556 ITPR1Q14643 2758 aa4.96□□□□□ -1.62
SYNPO2-206ENST00000610556 TRAV25A0A0B4J276 109 aa4.96□□□□□ -1.62
SYNPO2-206ENST00000610556 PLA2G2AP14555 144 aa4.96□□□□□ -1.62
SYNPO2-206ENST00000610556 RELNP78509 3460 aa4.96□□□□□ -1.62
SYNPO2-206ENST00000610556 ASH1LQ9NR48 2969 aaKnown RBP4.95□□□□□ -1.62
SYNPO2-206ENST00000610556 C1orf158Q8N1D5 194 aa4.95□□□□□ -1.62
SYNPO2-206ENST00000610556 DEFB135Q30KP9 77 aa4.95□□□□□ -1.62
SYNPO2-206ENST00000610556 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
SYNPO2-206ENST00000610556 KLK9Q2XQG4 91 aa4.94□□□□□ -1.62
SYNPO2-206ENST00000610556 SMIM1B2RUZ4 78 aa4.94□□□□□ -1.62
SYNPO2-206ENST00000610556 ACYP1P07311 99 aa4.94□□□□□ -1.62
SYNPO2-206ENST00000610556 FLNCQ14315 2725 aa4.94□□□□□ -1.62
SYNPO2-206ENST00000610556 CDC42SE2Q9NRR3 84 aa4.94□□□□□ -1.62
SYNPO2-206ENST00000610556 HAMPP81172 84 aa4.93□□□□□ -1.62
SYNPO2-206ENST00000610556 ORMDL1Q9P0S3 153 aa4.93□□□□□ -1.62
SYNPO2-206ENST00000610556 H0YGX0 51 aa4.93□□□□□ -1.62
SYNPO2-206ENST00000610556 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
SYNPO2-206ENST00000610556 TRBV6-8A0A0A6YYG3 113 aa4.93□□□□□ -1.62
SYNPO2-206ENST00000610556 TIMM17BO60830 172 aa4.93□□□□□ -1.62
SYNPO2-206ENST00000610556 NCR3O14931 201 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 LINC00482Q8N8I6 264 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 SDIM1Q6ZPB5 146 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 LINC00643Q86TS7 51 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 LINC00269Q8N2A0 174 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 LINC01006Q8NI28 216 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 ZFHX3Q15911 3703 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 IGLV4-60A0A075B6I1 120 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 FHL3Q13643 280 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 LINC00526Q96FQ7 95 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 HECTD1Q9ULT8 2610 aa4.92□□□□□ -1.62
SYNPO2-206ENST00000610556 EIF4EBP3O60516 100 aaPredicted RBP4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 Q8N2B8 174 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 C11orf72Q8NBR9 251 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 A0A1B0GX51 115 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 FAM222AQ5U5X8 452 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 SMIM11BQ8TCY0 68 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 UBL5Q9BZL1 73 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 TRBV6-4A0A1B0GX49 114 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 PRO0255Q9UI72 69 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 KLK12Q9UKR0 248 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 ZNF561-AS1K7EIQ3 104 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 TRACP01848 142 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 BEAN1Q3B7T3 259 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 ZNF843Q8N446 348 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 BBC3Q96PG8 261 aaPredicted RBP4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 FAM110AQ9BQ89 295 aa4.91□□□□□ -1.62
SYNPO2-206ENST00000610556 CHD6Q8TD26 2715 aa4.9□□□□□ -1.62
SYNPO2-206ENST00000610556 CCL18P55774 89 aa4.9□□□□□ -1.62
SYNPO2-206ENST00000610556 NTM-AS1Q6ZSK4 140 aa4.9□□□□□ -1.62
SYNPO2-206ENST00000610556 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.9□□□□□ -1.62
SYNPO2-206ENST00000610556 CFAP46Q8IYW2 2715 aa4.9□□□□□ -1.63
SYNPO2-206ENST00000610556 ITPR3Q14573 2671 aa4.9□□□□□ -1.63
SYNPO2-206ENST00000610556 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
SYNPO2-206ENST00000610556 IBA57-AS1B1ANH7 110 aa4.89□□□□□ -1.63
SYNPO2-206ENST00000610556 APOC4P55056 127 aa4.89□□□□□ -1.63
SYNPO2-206ENST00000610556 SPAG11BQ08648 103 aa4.89□□□□□ -1.63
SYNPO2-206ENST00000610556 LINC00959A0A1B0GUT2 108 aa4.89□□□□□ -1.63
SYNPO2-206ENST00000610556 SOSTDC1Q6X4U4 206 aa4.89□□□□□ -1.63
SYNPO2-206ENST00000610556 TMEM126AQ9H061 195 aa4.89□□□□□ -1.63
SYNPO2-206ENST00000610556 RPL18AQ02543 176 aaKnown RBP4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 MRPL23Q16540 153 aaKnown RBP4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 CHCHD10Q8WYQ3 142 aaPredicted RBP4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 LITAFQ99732 161 aa4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 FLNBO75369 2602 aaKnown RBP4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 SBSPONQ8IVN8 264 aa4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 REG3AQ06141 175 aa4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 SMR3AQ99954 134 aa4.88□□□□□ -1.63
SYNPO2-206ENST00000610556 A0A087WYN8 130 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 J3QKU1 62 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 LRRC75A-AS1Q8N1F1 130 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 C6orf99Q4VX62 202 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 C9orf116Q5BN46 136 aaPredicted RBP4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 LINC00337Q8N6G1 96 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 XAGE1AQ9HD64 81 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 DCHS2Q6V1P9 2916 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 ATOX1O00244 68 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 SHISA2Q6UWI4 295 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 ZANQ9Y493 2812 aa4.87□□□□□ -1.63
SYNPO2-206ENST00000610556 TRAV23DV6A0A075B6W5 121 aa4.86□□□□□ -1.63
SYNPO2-206ENST00000610556 NBPF19A0A087WUL8 3843 aa4.86□□□□□ -1.63
SYNPO2-206ENST00000610556 IGLV5-39A0A0G2JS06 123 aa4.86□□□□□ -1.63
SYNPO2-206ENST00000610556 SPART-AS1P0CW21 52 aa4.86□□□□□ -1.63
SYNPO2-206ENST00000610556 HIGD2BQ4VC39 106 aa4.86□□□□□ -1.63
SYNPO2-206ENST00000610556 CAMK2N2Q96S95 79 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms