RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TSTD1Q8NFU3 115 aa-1.11□□□□□ -2.59
HDDC2-207ENST00000608532 AQP10Q96PS8 301 aa-1.11□□□□□ -2.59
HDDC2-207ENST00000608532 SONP18583 2426 aaKnown RBP-1.11□□□□□ -2.59
HDDC2-207ENST00000608532 CFTRP13569 1480 aa-1.12□□□□□ -2.59
HDDC2-207ENST00000608532 J3QR89 54 aa-1.12□□□□□ -2.59
HDDC2-207ENST00000608532 TPT1P8Q9HAU6 139 aa-1.12□□□□□ -2.59
HDDC2-207ENST00000608532 POLA1P09884 1462 aaPredicted RBP-1.12□□□□□ -2.59
HDDC2-207ENST00000608532 MAGI1Q96QZ7 1491 aaPredicted RBP-1.12□□□□□ -2.59
HDDC2-207ENST00000608532 QRICH2Q9H0J4 1663 aa-1.13□□□□□ -2.59
HDDC2-207ENST00000608532 USP9YO00507 2555 aaPredicted RBP-1.13□□□□□ -2.59
HDDC2-207ENST00000608532 TACC2O95359 2948 aa-1.13□□□□□ -2.59
HDDC2-207ENST00000608532 HMGN4O00479 90 aa-1.13□□□□□ -2.59
HDDC2-207ENST00000608532 COPZ1P61923 177 aa-1.13□□□□□ -2.59
HDDC2-207ENST00000608532 SPRR4Q96PI1 79 aa-1.13□□□□□ -2.59
HDDC2-207ENST00000608532 TMEM191AQ9H0A3 160 aa-1.13□□□□□ -2.59
HDDC2-207ENST00000608532 NUP188Q5SRE5 1749 aa-1.13□□□□□ -2.59
HDDC2-207ENST00000608532 ITPR3Q14573 2671 aa-1.14□□□□□ -2.59
HDDC2-207ENST00000608532 TRBV7-3A0A075B6L6 115 aa-1.14□□□□□ -2.59
HDDC2-207ENST00000608532 DEFB135Q30KP9 77 aa-1.14□□□□□ -2.59
HDDC2-207ENST00000608532 C10orf113Q5VZT2 155 aa-1.14□□□□□ -2.59
HDDC2-207ENST00000608532 MAFIPQ8WZ33 124 aa-1.14□□□□□ -2.59
HDDC2-207ENST00000608532 DYNLRB1Q9NP97 96 aa-1.14□□□□□ -2.59
HDDC2-207ENST00000608532 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.14□□□□□ -2.59
HDDC2-207ENST00000608532 REV3LO60673 3130 aa-1.14□□□□□ -2.59
HDDC2-207ENST00000608532 HECTD1Q9ULT8 2610 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 HYDINQ4G0P3 5121 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 SHANK2Q9UPX8 1470 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 TRBV7-4A0A0J9YYF1 115 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 TPPP2P59282 170 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 SMIM21Q3B7S5 101 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 ANP32BQ92688 251 aaKnown RBP-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 MGST2Q99735 147 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 PDCD10Q9BUL8 212 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 LINC00474Q9P2X8 69 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 HTTP42858 3142 aa-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 XRN1Q8IZH2 1706 aaKnown RBP-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 CPSF1Q10570 1443 aaKnown RBP-1.15□□□□□ -2.59
HDDC2-207ENST00000608532 SPG11Q96JI7 2443 aa-1.16□□□□□ -2.59
HDDC2-207ENST00000608532 SFT2D2O95562 160 aa-1.16□□□□□ -2.6
HDDC2-207ENST00000608532 APOC3P02656 99 aa-1.16□□□□□ -2.6
HDDC2-207ENST00000608532 SMCO1Q147U7 214 aa-1.16□□□□□ -2.6
HDDC2-207ENST00000608532 LCN9Q8WX39 176 aa-1.16□□□□□ -2.6
HDDC2-207ENST00000608532 VPS13BQ7Z7G8 4022 aa-1.16□□□□□ -2.6
HDDC2-207ENST00000608532 BIRC6Q9NR09 4857 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 MBD5Q9P267 1494 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 CUBNO60494 3623 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 AKAP14Q86UN6 197 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 MYOZ3Q8TDC0 251 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 TMEM263Q8WUH6 116 aaKnown RBP-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 PYDC1Q8WXC3 89 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 COPZ2Q9P299 210 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 APLNQ9ULZ1 77 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 SERP1Q9Y6X1 66 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 AKAP13Q12802 2813 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 RYR3Q15413 4870 aa-1.17□□□□□ -2.6
HDDC2-207ENST00000608532 A0A0G2JMZ2 1700 aa-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 PRRC2CQ9Y520 2896 aaKnown RBP-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 TNRC18O15417 2968 aaPredicted RBP-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 APOBP04114 4563 aaKnown RBP-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 DEFB112Q30KQ8 113 aa-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 C12orf73Q69YU5 71 aa-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 TCEAL4Q96EI5 215 aa-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 LINC01600Q96MT4 127 aa-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 SPRR2FQ96RM1 72 aa-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 C1orf167Q5SNV9 1468 aa-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 KNL1Q8NG31 2342 aa-1.18□□□□□ -2.6
HDDC2-207ENST00000608532 ANKRD36A6QL64 1941 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 FASNP49327 2511 aaKnown RBP-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 EHBP1L1Q8N3D4 1523 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 IGLC1P0CG04 106 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 ADAMTS12P58397 1594 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 DR1Q01658 176 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 SMG6Q86US8 1419 aaKnown RBP-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 TEP1Q99973 2627 aaKnown RBP-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 RERGLQ9H628 205 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 CDC42SE2Q9NRR3 84 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 CRIPTQ9P021 101 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 CCDC167Q9P0B6 97 aa-1.19□□□□□ -2.6
HDDC2-207ENST00000608532 COL4A6Q14031 1691 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 SETBP1Q9Y6X0 1596 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 H1FX-AS1Q4G0G2 97 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 MRPL54Q6P161 138 aaKnown RBP-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 FAM223AQ8IWN6 122 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 SPANXDQ9BXN6 97 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 NAA60Q9H7X0 242 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 ADGRL2O95490 1459 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 NLRP1Q9C000 1473 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 CUL7Q14999 1698 aa-1.2□□□□□ -2.6
HDDC2-207ENST00000608532 RYR1P21817 5038 aa-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 PTPN23Q9H3S7 1636 aa-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 ZZEF1O43149 2961 aa-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 LOC105371267A0A1B0GV96 52 aa-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 SYS1-DBNDD2H3BUS1 97 aa-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 MGPP08493 103 aa-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 LZICQ8WZA0 190 aa-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 SNRNP25Q9BV90 132 aaKnown RBP-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 NKTRP30414 1462 aaKnown RBP-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 MYO18BQ8IUG5 2567 aa-1.21□□□□□ -2.6
HDDC2-207ENST00000608532 TOP2BQ02880 1626 aa-1.22□□□□□ -2.6
HDDC2-207ENST00000608532 PDCD11Q14690 1871 aaKnown RBP-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms