RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 ORAOV1Q8WV07 137 aa9.2□□□□□ -0.94
HDDC2-204ENST00000608295 CAMK2N2Q96S95 79 aa9.2□□□□□ -0.94
HDDC2-204ENST00000608295 HNRNPA3P51991 378 aaKnown RBP9.19□□□□□ -0.94
HDDC2-204ENST00000608295 MRPS36P82909 103 aaKnown RBP9.19□□□□□ -0.94
HDDC2-204ENST00000608295 STPG4Q8N801 248 aa9.19□□□□□ -0.94
HDDC2-204ENST00000608295 CYSLTR1Q9Y271 337 aa9.19□□□□□ -0.94
HDDC2-204ENST00000608295 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
HDDC2-204ENST00000608295 TMEM141Q96I45 108 aa9.18□□□□□ -0.94
HDDC2-204ENST00000608295 DMBT1Q9UGM3 2413 aaPredicted RBP9.17□□□□□ -0.94
HDDC2-204ENST00000608295 TGIF2-C20orf24A0A0A6YYL0 155 aa9.17□□□□□ -0.94
HDDC2-204ENST00000608295 J3QL48 77 aa9.17□□□□□ -0.94
HDDC2-204ENST00000608295 GAGE2BQ13066 116 aa9.17□□□□□ -0.94
HDDC2-204ENST00000608295 TEX43Q6ZNM6 134 aa9.17□□□□□ -0.94
HDDC2-204ENST00000608295 CARHSP1Q9Y2V2 147 aaKnown RBP9.17□□□□□ -0.94
HDDC2-204ENST00000608295 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
HDDC2-204ENST00000608295 PRSS47A8MTI9 375 aa9.16□□□□□ -0.94
HDDC2-204ENST00000608295 APOMO95445 188 aa9.16□□□□□ -0.94
HDDC2-204ENST00000608295 APOC3P02656 99 aa9.16□□□□□ -0.94
HDDC2-204ENST00000608295 RPL18AQ02543 176 aaKnown RBP9.16□□□□□ -0.94
HDDC2-204ENST00000608295 RHEBQ15382 184 aa9.16□□□□□ -0.94
HDDC2-204ENST00000608295 ORMDL2Q53FV1 153 aa9.16□□□□□ -0.94
HDDC2-204ENST00000608295 Q6ZN92 141 aa9.16□□□□□ -0.94
HDDC2-204ENST00000608295 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
HDDC2-204ENST00000608295 NXT2Q9NPJ8 142 aaKnown RBP9.16□□□□□ -0.94
HDDC2-204ENST00000608295 IGHV3OR16-9A0A0B4J2B5 98 aa9.15□□□□□ -0.94
HDDC2-204ENST00000608295 C10orf91Q5T1B1 145 aa9.15□□□□□ -0.94
HDDC2-204ENST00000608295 LINC00242Q5T6M2 205 aa9.15□□□□□ -0.94
HDDC2-204ENST00000608295 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
HDDC2-204ENST00000608295 C2orf88Q9BSF0 95 aa9.15□□□□□ -0.94
HDDC2-204ENST00000608295 FABP9Q0Z7S8 132 aa9.14□□□□□ -0.95
HDDC2-204ENST00000608295 PLAC8Q9NZF1 115 aa9.14□□□□□ -0.95
HDDC2-204ENST00000608295 PYGO1Q9Y3Y4 419 aa9.14□□□□□ -0.95
HDDC2-204ENST00000608295 UBE2D1P51668 147 aa9.13□□□□□ -0.95
HDDC2-204ENST00000608295 ALKBH7Q9BT30 221 aaPredicted RBP9.13□□□□□ -0.95
HDDC2-204ENST00000608295 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
HDDC2-204ENST00000608295 PKHD1L1Q86WI1 4243 aa9.12□□□□□ -0.95
HDDC2-204ENST00000608295 LOC107984640A0A0U1RRK4 108 aa9.12□□□□□ -0.95
HDDC2-204ENST00000608295 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.12□□□□□ -0.95
HDDC2-204ENST00000608295 PTTG1IPP53801 180 aa9.12□□□□□ -0.95
HDDC2-204ENST00000608295 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
HDDC2-204ENST00000608295 OR10D4PQ8NGN7 298 aa9.12□□□□□ -0.95
HDDC2-204ENST00000608295 C7orf33Q8WU49 177 aa9.12□□□□□ -0.95
HDDC2-204ENST00000608295 VCX2Q9H322 139 aa9.12□□□□□ -0.95
HDDC2-204ENST00000608295 C2orf82Q6UX34 121 aa9.11□□□□□ -0.95
HDDC2-204ENST00000608295 UNQ6190/PRO20217Q6UXQ8 127 aa9.11□□□□□ -0.95
HDDC2-204ENST00000608295 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
HDDC2-204ENST00000608295 TOMM7Q9P0U1 55 aa9.11□□□□□ -0.95
HDDC2-204ENST00000608295 HERC1Q15751 4861 aa9.11□□□□□ -0.95
HDDC2-204ENST00000608295 IGIPA6NJ69 53 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 NDUFA1O15239 70 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 NDUFA5Q16718 116 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 FA2HQ7L5A8 372 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 TOMM6Q96B49 74 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 SCGB3A1Q96QR1 104 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 AMELXQ99217 191 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 SMCO4Q9NRQ5 59 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 PKIGQ9Y2B9 76 aa9.1□□□□□ -0.95
HDDC2-204ENST00000608295 LRP1Q07954 4544 aaKnown RBP9.09□□□□□ -0.95
HDDC2-204ENST00000608295 A0A087WZ39 114 aa9.09□□□□□ -0.95
HDDC2-204ENST00000608295 MT-ND6P03923 174 aa9.09□□□□□ -0.95
HDDC2-204ENST00000608295 K7EMI3 77 aa9.08□□□□□ -0.96
HDDC2-204ENST00000608295 COX19Q49B96 90 aa9.08□□□□□ -0.96
HDDC2-204ENST00000608295 SVBPQ8N300 66 aa9.08□□□□□ -0.96
HDDC2-204ENST00000608295 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
HDDC2-204ENST00000608295 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
HDDC2-204ENST00000608295 TRAPPC1Q9Y5R8 145 aa9.08□□□□□ -0.96
HDDC2-204ENST00000608295 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
HDDC2-204ENST00000608295 SNAPINO95295 136 aa9.07□□□□□ -0.96
HDDC2-204ENST00000608295 PRR3P79522 188 aaKnown RBP9.07□□□□□ -0.96
HDDC2-204ENST00000608295 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
HDDC2-204ENST00000608295 TIMM17AQ99595 171 aa9.07□□□□□ -0.96
HDDC2-204ENST00000608295 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
HDDC2-204ENST00000608295 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
HDDC2-204ENST00000608295 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
HDDC2-204ENST00000608295 PMCHL1Q16048 86 aa9.06□□□□□ -0.96
HDDC2-204ENST00000608295 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
HDDC2-204ENST00000608295 GEMIN7Q9H840 131 aaKnown RBP9.06□□□□□ -0.96
HDDC2-204ENST00000608295 MRPL35Q9NZE8 188 aaKnown RBP9.06□□□□□ -0.96
HDDC2-204ENST00000608295 CDKN2A-AS1Q9UH64 79 aa9.06□□□□□ -0.96
HDDC2-204ENST00000608295 FAM168BA1KXE4 195 aa9.05□□□□□ -0.96
HDDC2-204ENST00000608295 PRSS2P07478 247 aa9.05□□□□□ -0.96
HDDC2-204ENST00000608295 KIAA0087Q14695 138 aa9.05□□□□□ -0.96
HDDC2-204ENST00000608295 PAPPA-AS1Q5QFB9 102 aa9.05□□□□□ -0.96
HDDC2-204ENST00000608295 ERASQ7Z444 233 aa9.05□□□□□ -0.96
HDDC2-204ENST00000608295 FAM19A5Q7Z5A7 132 aaPredicted RBP9.05□□□□□ -0.96
HDDC2-204ENST00000608295 LINC00469Q8N7U9 141 aa9.05□□□□□ -0.96
HDDC2-204ENST00000608295 PACRGQ96M98 296 aaPredicted RBP9.05□□□□□ -0.96
HDDC2-204ENST00000608295 G0S2P27469 103 aa9.04□□□□□ -0.96
HDDC2-204ENST00000608295 Q6ZRP5 223 aa9.04□□□□□ -0.96
HDDC2-204ENST00000608295 PHF5AQ7RTV0 110 aaKnown RBP9.04□□□□□ -0.96
HDDC2-204ENST00000608295 C18orf32Q8TCD1 76 aa9.04□□□□□ -0.96
HDDC2-204ENST00000608295 NPSP0C0P6 89 aa9.03□□□□□ -0.96
HDDC2-204ENST00000608295 NDUFA6P56556 154 aa9.03□□□□□ -0.96
HDDC2-204ENST00000608295 HERVK_113P63121 156 aa9.03□□□□□ -0.96
HDDC2-204ENST00000608295 CBLN2Q8IUK8 224 aa9.03□□□□□ -0.96
HDDC2-204ENST00000608295 URB1-AS1Q96HZ7 61 aa9.03□□□□□ -0.96
HDDC2-204ENST00000608295 LINC01546A6NGU7 62 aa9.02□□□□□ -0.97
HDDC2-204ENST00000608295 CKS1BP61024 79 aa9.02□□□□□ -0.97
HDDC2-204ENST00000608295 RNF151Q2KHN1 245 aa9.02□□□□□ -0.97
HDDC2-204ENST00000608295 A0A096LNJ9 63 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms