RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 LST1O00453 97 aa14.35□□□□□ -0.11
SHKBP1-225ENST00000600733 PLA2G2AP14555 144 aa14.35□□□□□ -0.11
SHKBP1-225ENST00000600733 PRIMA1Q86XR5 153 aa14.35□□□□□ -0.11
SHKBP1-225ENST00000600733 TRGV2A0A075B6R0 118 aa14.35□□□□□ -0.11
SHKBP1-225ENST00000600733 UBE2WQ96B02 151 aa14.35□□□□□ -0.11
SHKBP1-225ENST00000600733 TEX29Q8N6K0 151 aa14.34□□□□□ -0.11
SHKBP1-225ENST00000600733 UBE2L6O14933 153 aa14.34□□□□□ -0.11
SHKBP1-225ENST00000600733 MEIG1Q5JSS6 88 aa14.33□□□□□ -0.12
SHKBP1-225ENST00000600733 TMEM243Q9BU79 118 aa14.33□□□□□ -0.12
SHKBP1-225ENST00000600733 C16orf74Q96GX8 76 aa14.32□□□□□ -0.12
SHKBP1-225ENST00000600733 C19orf73Q9NVV2 129 aa14.31□□□□□ -0.12
SHKBP1-225ENST00000600733 PDZD2O15018 2839 aa14.31□□□□□ -0.12
SHKBP1-225ENST00000600733 H3BT86 120 aa14.31□□□□□ -0.12
SHKBP1-225ENST00000600733 IGLV1-51P01701 117 aa14.3□□□□□ -0.12
SHKBP1-225ENST00000600733 TRAV8-4A0A0B4J246 113 aa14.29□□□□□ -0.12
SHKBP1-225ENST00000600733 KRTAP1-1Q07627 177 aa14.29□□□□□ -0.12
SHKBP1-225ENST00000600733 CSNK1G2-AS1Q8NCQ2 148 aa14.29□□□□□ -0.12
SHKBP1-225ENST00000600733 CITED1Q99966 193 aa14.29□□□□□ -0.12
SHKBP1-225ENST00000600733 CRLF1O75462 422 aa14.28□□□□□ -0.12
SHKBP1-225ENST00000600733 ITPR2Q14571 2701 aa14.28□□□□□ -0.12
SHKBP1-225ENST00000600733 TRGV4A0A0C4DH28 118 aa14.27□□□□□ -0.12
SHKBP1-225ENST00000600733 IGKV3OR2-268A0A0C4DH90 116 aa14.27□□□□□ -0.12
SHKBP1-225ENST00000600733 TRBV6-4A0A1B0GX49 114 aa14.27□□□□□ -0.13
SHKBP1-225ENST00000600733 CMC4P56277 68 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-225ENST00000600733 GAGE6Q13070 117 aa14.27□□□□□ -0.13
SHKBP1-225ENST00000600733 RNASE1P07998 156 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-225ENST00000600733 ANK3Q12955 4377 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-225ENST00000600733 HERV-K104P63124 156 aa14.25□□□□□ -0.13
SHKBP1-225ENST00000600733 COPS9Q8WXC6 57 aa14.25□□□□□ -0.13
SHKBP1-225ENST00000600733 OVOL2Q9BRP0 275 aa14.25□□□□□ -0.13
SHKBP1-225ENST00000600733 C16orf95Q9H693 158 aa14.25□□□□□ -0.13
SHKBP1-225ENST00000600733 SNCGO76070 127 aa14.25□□□□□ -0.13
SHKBP1-225ENST00000600733 IGLV4-60A0A075B6I1 120 aa14.24□□□□□ -0.13
SHKBP1-225ENST00000600733 SHISA2Q6UWI4 295 aa14.24□□□□□ -0.13
SHKBP1-225ENST00000600733 COX7A2LO14548 114 aa14.24□□□□□ -0.13
SHKBP1-225ENST00000600733 FAM110AQ9BQ89 295 aa14.24□□□□□ -0.13
SHKBP1-225ENST00000600733 FHL2Q14192 279 aa14.23□□□□□ -0.13
SHKBP1-225ENST00000600733 TOMM7Q9P0U1 55 aa14.23□□□□□ -0.13
SHKBP1-225ENST00000600733 FN1P02751 2386 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-225ENST00000600733 COX7B2Q8TF08 81 aa14.21□□□□□ -0.13
SHKBP1-225ENST00000600733 TRAV26-1A0A087WT03 109 aa14.21□□□□□ -0.14
SHKBP1-225ENST00000600733 TRBV6-8A0A0A6YYG3 113 aa14.21□□□□□ -0.14
SHKBP1-225ENST00000600733 CHCHD5Q9BSY4 110 aa14.21□□□□□ -0.14
SHKBP1-225ENST00000600733 C15orf53Q8NAA6 179 aa14.2□□□□□ -0.14
SHKBP1-225ENST00000600733 GCN1Q92616 2671 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-225ENST00000600733 GAGE2BQ13066 116 aa14.2□□□□□ -0.14
SHKBP1-225ENST00000600733 GAGE2EQ4V326 116 aa14.2□□□□□ -0.14
SHKBP1-225ENST00000600733 GAGE2DQ9UEU5 116 aa14.2□□□□□ -0.14
SHKBP1-225ENST00000600733 MIR7-3HGQ8N6C7 128 aa14.19□□□□□ -0.14
SHKBP1-225ENST00000600733 ANAPC13Q9BS18 74 aa14.19□□□□□ -0.14
SHKBP1-225ENST00000600733 DEFB121Q5J5C9 76 aa14.18□□□□□ -0.14
SHKBP1-225ENST00000600733 DEFB130BP0DP73 79 aa14.18□□□□□ -0.14
SHKBP1-225ENST00000600733 DEFB130AP0DP74 79 aa14.18□□□□□ -0.14
SHKBP1-225ENST00000600733 NBEAL2Q6ZNJ1 2754 aa14.18□□□□□ -0.14
SHKBP1-225ENST00000600733 TTC32Q5I0X7 151 aa14.17□□□□□ -0.14
SHKBP1-225ENST00000600733 FAM218AQ96MZ4 157 aa14.17□□□□□ -0.14
SHKBP1-225ENST00000600733 IGHV3OR16-9A0A0B4J2B5 98 aa14.16□□□□□ -0.14
SHKBP1-225ENST00000600733 C5orf38Q86SI9 138 aa14.15□□□□□ -0.14
SHKBP1-225ENST00000600733 LINC00337Q8N6G1 96 aa14.15□□□□□ -0.14
SHKBP1-225ENST00000600733 IGKV2-28A0A075B6P5 120 aa14.13□□□□□ -0.15
SHKBP1-225ENST00000600733 IGKV2D-28P01615 120 aa14.13□□□□□ -0.15
SHKBP1-225ENST00000600733 LINC00158P58513 81 aa14.13□□□□□ -0.15
SHKBP1-225ENST00000600733 SND1-IT1Q9HBX3 110 aa14.13□□□□□ -0.15
SHKBP1-225ENST00000600733 FAM240AA0A1B0GVK7 77 aa14.13□□□□□ -0.15
SHKBP1-225ENST00000600733 PPDPFQ9H3Y8 114 aa14.13□□□□□ -0.15
SHKBP1-225ENST00000600733 CRPP02741 224 aa14.12□□□□□ -0.15
SHKBP1-225ENST00000600733 NHLRC4P0CG21 123 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-225ENST00000600733 HILS1P60008 231 aa14.12□□□□□ -0.15
SHKBP1-225ENST00000600733 TRACP01848 142 aa14.12□□□□□ -0.15
SHKBP1-225ENST00000600733 A0A087WZ39 114 aa14.11□□□□□ -0.15
SHKBP1-225ENST00000600733 TRAV13-2A0A0B4J235 113 aa14.11□□□□□ -0.15
SHKBP1-225ENST00000600733 NDUFV3P56181 108 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-225ENST00000600733 VWFP04275 2813 aa14.11□□□□□ -0.15
SHKBP1-225ENST00000600733 BAALC-AS2P0C853 105 aa14.1□□□□□ -0.15
SHKBP1-225ENST00000600733 KRTAP10-3P60369 221 aa14.1□□□□□ -0.15
SHKBP1-225ENST00000600733 UNC79Q9P2D8 2635 aa14.1□□□□□ -0.15
SHKBP1-225ENST00000600733 PFN2P35080 140 aa14.1□□□□□ -0.15
SHKBP1-225ENST00000600733 Q6Q795 121 aa14.1□□□□□ -0.15
SHKBP1-225ENST00000600733 LINC00959A0A1B0GUT2 108 aa14.09□□□□□ -0.15
SHKBP1-225ENST00000600733 GYPEP15421 78 aa14.09□□□□□ -0.15
SHKBP1-225ENST00000600733 RPL28P46779 137 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-225ENST00000600733 CCL18P55774 89 aa14.09□□□□□ -0.15
SHKBP1-225ENST00000600733 C11orf68Q9H3H3 251 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-225ENST00000600733 Q9HAA7 133 aa14.09□□□□□ -0.15
SHKBP1-225ENST00000600733 C22orf24Q9Y442 160 aa14.09□□□□□ -0.15
SHKBP1-225ENST00000600733 HELZ2Q9BYK8 2649 aaKnown RBP14.08□□□□□ -0.15
SHKBP1-225ENST00000600733 PF4P02776 101 aa14.08□□□□□ -0.15
SHKBP1-225ENST00000600733 FAM222AQ5U5X8 452 aa14.08□□□□□ -0.15
SHKBP1-225ENST00000600733 SMR3AQ99954 134 aa14.08□□□□□ -0.15
SHKBP1-225ENST00000600733 HIVEP2P31629 2446 aa14.08□□□□□ -0.16
SHKBP1-225ENST00000600733 KIR2DL5BQ8NHK3 375 aa14.07□□□□□ -0.16
SHKBP1-225ENST00000600733 A0A096LPF7 62 aa14.06□□□□□ -0.16
SHKBP1-225ENST00000600733 XCL1P47992 114 aa14.06□□□□□ -0.16
SHKBP1-225ENST00000600733 IBA57-AS1B1ANH7 110 aa14.06□□□□□ -0.16
SHKBP1-225ENST00000600733 MRPL23Q16540 153 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-225ENST00000600733 CLPSL2Q6UWE3 100 aa14.06□□□□□ -0.16
SHKBP1-225ENST00000600733 LINC00612Q8N6U2 182 aa14.06□□□□□ -0.16
SHKBP1-225ENST00000600733 SMIM11BQ8TCY0 68 aa14.06□□□□□ -0.16
SHKBP1-225ENST00000600733 FASNP49327 2511 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-225ENST00000600733 X6R8D5 127 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms