RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 LRRC75A-AS1Q8N1F1 130 aa13.19□□□□□ -0.3
ARHGEF1-221ENST00000600387 LINC00158P58513 81 aa13.19□□□□□ -0.3
ARHGEF1-221ENST00000600387 C14orf132Q9NPU4 83 aa13.19□□□□□ -0.3
ARHGEF1-221ENST00000600387 KLK5Q9Y337 293 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF1-221ENST00000600387 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
ARHGEF1-221ENST00000600387 RPL18AQ02543 176 aaKnown RBP13.18□□□□□ -0.3
ARHGEF1-221ENST00000600387 ODF3L2Q3SX64 289 aa13.18□□□□□ -0.3
ARHGEF1-221ENST00000600387 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
ARHGEF1-221ENST00000600387 FSHBP01225 129 aa13.17□□□□□ -0.3
ARHGEF1-221ENST00000600387 IBA57-AS1B1ANH7 110 aa13.16□□□□□ -0.3
ARHGEF1-221ENST00000600387 J3KT08 172 aa13.16□□□□□ -0.3
ARHGEF1-221ENST00000600387 CCL18P55774 89 aa13.16□□□□□ -0.3
ARHGEF1-221ENST00000600387 A0A096LNT2 108 aa13.16□□□□□ -0.3
ARHGEF1-221ENST00000600387 KHDC1LQ5JSQ8 128 aa13.16□□□□□ -0.3
ARHGEF1-221ENST00000600387 TRAV25A0A0B4J276 109 aa13.15□□□□□ -0.3
ARHGEF1-221ENST00000600387 C9orf129Q5T035 196 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-221ENST00000600387 MAP1AP78559 2803 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF1-221ENST00000600387 CELSR2Q9HCU4 2923 aa13.15□□□□□ -0.3
ARHGEF1-221ENST00000600387 LINC00846Q9NV44 126 aa13.14□□□□□ -0.31
ARHGEF1-221ENST00000600387 LECT2O14960 151 aa13.13□□□□□ -0.31
ARHGEF1-221ENST00000600387 NOP10Q9NPE3 64 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-221ENST00000600387 RPS28P62857 69 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-221ENST00000600387 IGHV3OR16-9A0A0B4J2B5 98 aa13.11□□□□□ -0.31
ARHGEF1-221ENST00000600387 IGKV3D-7A0A0C4DH55 119 aa13.11□□□□□ -0.31
ARHGEF1-221ENST00000600387 MAPK1IP1LQ8NDC0 245 aa13.11□□□□□ -0.31
ARHGEF1-221ENST00000600387 TRBV6-4A0A1B0GX49 114 aa13.11□□□□□ -0.31
ARHGEF1-221ENST00000600387 hADV29S1A0JD25 119 aa13.11□□□□□ -0.31
ARHGEF1-221ENST00000600387 LOC107984640A0A0U1RRK4 108 aa13.1□□□□□ -0.31
ARHGEF1-221ENST00000600387 SERP2Q8N6R1 65 aa13.1□□□□□ -0.31
ARHGEF1-221ENST00000600387 A0A087WZ39 114 aa13.1□□□□□ -0.31
ARHGEF1-221ENST00000600387 PAX4O43316 350 aa13.1□□□□□ -0.31
ARHGEF1-221ENST00000600387 IGKV3OR2-268A0A0C4DH90 116 aa13.09□□□□□ -0.31
ARHGEF1-221ENST00000600387 ORMDL1Q9P0S3 153 aa13.09□□□□□ -0.31
ARHGEF1-221ENST00000600387 NCR3O14931 201 aa13.09□□□□□ -0.31
ARHGEF1-221ENST00000600387 LY6G6DO95868 133 aa13.09□□□□□ -0.31
ARHGEF1-221ENST00000600387 OR13C6PQ8NH95 151 aa13.09□□□□□ -0.31
ARHGEF1-221ENST00000600387 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.32
ARHGEF1-221ENST00000600387 PFN2P35080 140 aa13.08□□□□□ -0.32
ARHGEF1-221ENST00000600387 C16orf74Q96GX8 76 aa13.08□□□□□ -0.32
ARHGEF1-221ENST00000600387 LOC100131303A0A0U1RQF7 123 aa13.08□□□□□ -0.32
ARHGEF1-221ENST00000600387 IGLV4-60A0A075B6I1 120 aa13.07□□□□□ -0.32
ARHGEF1-221ENST00000600387 TMEM258P61165 79 aa13.06□□□□□ -0.32
ARHGEF1-221ENST00000600387 TRBV6-8A0A0A6YYG3 113 aa13.06□□□□□ -0.32
ARHGEF1-221ENST00000600387 CCKP06307 115 aa13.05□□□□□ -0.32
ARHGEF1-221ENST00000600387 LINC01561Q8N1V8 128 aa13.05□□□□□ -0.32
ARHGEF1-221ENST00000600387 TRGV4A0A0C4DH28 118 aa13.05□□□□□ -0.32
ARHGEF1-221ENST00000600387 USP17L23D6RBM5 183 aa13.05□□□□□ -0.32
ARHGEF1-221ENST00000600387 IGHV4-31P0DP07 118 aa13.05□□□□□ -0.32
ARHGEF1-221ENST00000600387 S100A7L2Q5SY68 101 aa13.05□□□□□ -0.32
ARHGEF1-221ENST00000600387 FAM19A5Q7Z5A7 132 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF1-221ENST00000600387 A0A087WVE0 104 aa13.04□□□□□ -0.32
ARHGEF1-221ENST00000600387 PLAC8L1A1L4L8 177 aa13.04□□□□□ -0.32
ARHGEF1-221ENST00000600387 SLPIP03973 132 aa13.04□□□□□ -0.32
ARHGEF1-221ENST00000600387 UPK3BQ9BT76 320 aa13.04□□□□□ -0.32
ARHGEF1-221ENST00000600387 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
ARHGEF1-221ENST00000600387 CR1P17927 2039 aa13.03□□□□□ -0.32
ARHGEF1-221ENST00000600387 LINC00167Q96N53 147 aa13.03□□□□□ -0.32
ARHGEF1-221ENST00000600387 JMJD7-PLA2G4BH0Y9G9 81 aa13.02□□□□□ -0.32
ARHGEF1-221ENST00000600387 SS18Q15532 418 aa13.02□□□□□ -0.32
ARHGEF1-221ENST00000600387 C6orf226Q5I0X4 101 aa13.02□□□□□ -0.32
ARHGEF1-221ENST00000600387 CYSTM1Q9H1C7 97 aa13.02□□□□□ -0.32
ARHGEF1-221ENST00000600387 ITPR1Q14643 2758 aa13.02□□□□□ -0.33
ARHGEF1-221ENST00000600387 CMC4P56277 68 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF1-221ENST00000600387 TMEM86BQ8N661 226 aa13.01□□□□□ -0.33
ARHGEF1-221ENST00000600387 ATP5EP2Q5VTU8 51 aa13.01□□□□□ -0.33
ARHGEF1-221ENST00000600387 MXRA5Q9NR99 2828 aa13□□□□□ -0.33
ARHGEF1-221ENST00000600387 LINC00959A0A1B0GUT2 108 aa13□□□□□ -0.33
ARHGEF1-221ENST00000600387 GIG44P09565 113 aaPredicted RBP13□□□□□ -0.33
ARHGEF1-221ENST00000600387 C5orf47Q569G3 176 aa13□□□□□ -0.33
ARHGEF1-221ENST00000600387 ANKRD17O75179 2603 aaKnown RBP13□□□□□ -0.33
ARHGEF1-221ENST00000600387 SMIM9A6NGZ8 99 aa12.99□□□□□ -0.33
ARHGEF1-221ENST00000600387 DOPEY1Q5JWR5 2465 aa12.99□□□□□ -0.33
ARHGEF1-221ENST00000600387 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
ARHGEF1-221ENST00000600387 DPH3Q96FX2 82 aa12.99□□□□□ -0.33
ARHGEF1-221ENST00000600387 TMEM256-PLSCR3K7ERE1 68 aa12.98□□□□□ -0.33
ARHGEF1-221ENST00000600387 FHL2Q14192 279 aa12.98□□□□□ -0.33
ARHGEF1-221ENST00000600387 ZANQ9Y493 2812 aa12.98□□□□□ -0.33
ARHGEF1-221ENST00000600387 CHD8Q9HCK8 2581 aa12.98□□□□□ -0.33
ARHGEF1-221ENST00000600387 Q8IZM0 81 aa12.97□□□□□ -0.33
ARHGEF1-221ENST00000600387 C2CD3Q4AC94 2353 aa12.97□□□□□ -0.33
ARHGEF1-221ENST00000600387 CCL24O00175 119 aa12.97□□□□□ -0.33
ARHGEF1-221ENST00000600387 Q8N814 137 aa12.97□□□□□ -0.33
ARHGEF1-221ENST00000600387 USP9YO00507 2555 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF1-221ENST00000600387 C11orf68Q9H3H3 251 aaKnown RBP12.96□□□□□ -0.33
ARHGEF1-221ENST00000600387 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.33
ARHGEF1-221ENST00000600387 WNK1Q9H4A3 2382 aa12.95□□□□□ -0.34
ARHGEF1-221ENST00000600387 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
ARHGEF1-221ENST00000600387 NOTCH3Q9UM47 2321 aa12.94□□□□□ -0.34
ARHGEF1-221ENST00000600387 NDUFC2O95298 119 aa12.93□□□□□ -0.34
ARHGEF1-221ENST00000600387 LYPD5Q6UWN5 251 aa12.93□□□□□ -0.34
ARHGEF1-221ENST00000600387 CSMD2Q7Z408 3487 aa12.93□□□□□ -0.34
ARHGEF1-221ENST00000600387 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
ARHGEF1-221ENST00000600387 KIR2DL5BQ8NHK3 375 aa12.93□□□□□ -0.34
ARHGEF1-221ENST00000600387 CSNK1G2-AS1Q8NCQ2 148 aa12.92□□□□□ -0.34
ARHGEF1-221ENST00000600387 TRBV10-3A0A0K0K1G6 114 aa12.92□□□□□ -0.34
ARHGEF1-221ENST00000600387 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
ARHGEF1-221ENST00000600387 XCL1P47992 114 aa12.92□□□□□ -0.34
ARHGEF1-221ENST00000600387 MYO9AB2RTY4 2548 aa12.91□□□□□ -0.34
ARHGEF1-221ENST00000600387 A0A1B0GUV1 79 aa12.91□□□□□ -0.34
ARHGEF1-221ENST00000600387 CHD6Q8TD26 2715 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms