RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 LINC01620Q4KN68 170 aa13.86□□□□□ -0.19
GRAMD1A-207ENST00000598118 TMEM243Q9BU79 118 aa13.86□□□□□ -0.19
GRAMD1A-207ENST00000598118 IFITM1P13164 125 aa13.85□□□□□ -0.19
GRAMD1A-207ENST00000598118 KRTAP10-3P60369 221 aa13.85□□□□□ -0.19
GRAMD1A-207ENST00000598118 KMT2BQ9UMN6 2715 aaPredicted RBP13.85□□□□□ -0.19
GRAMD1A-207ENST00000598118 TRBV6-4A0A1B0GX49 114 aa13.85□□□□□ -0.19
GRAMD1A-207ENST00000598118 FASNP49327 2511 aaKnown RBP13.84□□□□□ -0.19
GRAMD1A-207ENST00000598118 HIVEP2P31629 2446 aa13.84□□□□□ -0.19
GRAMD1A-207ENST00000598118 UBE2L6O14933 153 aa13.84□□□□□ -0.19
GRAMD1A-207ENST00000598118 LINC00308Q8TCZ7 52 aa13.84□□□□□ -0.19
GRAMD1A-207ENST00000598118 TRGV4A0A0C4DH28 118 aa13.83□□□□□ -0.2
GRAMD1A-207ENST00000598118 M0QXV9 152 aa13.83□□□□□ -0.2
GRAMD1A-207ENST00000598118 RPL13AP40429 203 aaKnown RBP13.83□□□□□ -0.2
GRAMD1A-207ENST00000598118 CIRBPQ14011 172 aaKnown RBP13.83□□□□□ -0.2
GRAMD1A-207ENST00000598118 FHL2Q14192 279 aa13.83□□□□□ -0.2
GRAMD1A-207ENST00000598118 SOSTDC1Q6X4U4 206 aa13.82□□□□□ -0.2
GRAMD1A-207ENST00000598118 SCGB1A1P11684 91 aa13.81□□□□□ -0.2
GRAMD1A-207ENST00000598118 CLEC2BQ92478 149 aa13.81□□□□□ -0.2
GRAMD1A-207ENST00000598118 J3QKU1 62 aa13.81□□□□□ -0.2
GRAMD1A-207ENST00000598118 PRIMA1Q86XR5 153 aa13.8□□□□□ -0.2
GRAMD1A-207ENST00000598118 GAGE6Q13070 117 aa13.8□□□□□ -0.2
GRAMD1A-207ENST00000598118 TRBV10-2A0A0K0K1G8 114 aa13.79□□□□□ -0.2
GRAMD1A-207ENST00000598118 NTN5Q8WTR8 489 aaPredicted RBP13.79□□□□□ -0.2
GRAMD1A-207ENST00000598118 CIDEAO60543 219 aa13.79□□□□□ -0.2
GRAMD1A-207ENST00000598118 IGLV4-60A0A075B6I1 120 aa13.78□□□□□ -0.2
GRAMD1A-207ENST00000598118 XGP55808 180 aa13.78□□□□□ -0.2
GRAMD1A-207ENST00000598118 LINC01600Q96MT4 127 aa13.78□□□□□ -0.2
GRAMD1A-207ENST00000598118 MT-ATP8P03928 68 aa13.78□□□□□ -0.2
GRAMD1A-207ENST00000598118 COX6CP09669 75 aa13.78□□□□□ -0.2
GRAMD1A-207ENST00000598118 MEIG1Q5JSS6 88 aa13.78□□□□□ -0.2
GRAMD1A-207ENST00000598118 IGKV3OR2-268A0A0C4DH90 116 aa13.77□□□□□ -0.21
GRAMD1A-207ENST00000598118 H7C423 109 aa13.77□□□□□ -0.21
GRAMD1A-207ENST00000598118 TRBV6-8A0A0A6YYG3 113 aa13.76□□□□□ -0.21
GRAMD1A-207ENST00000598118 DEFB130BP0DP73 79 aa13.76□□□□□ -0.21
GRAMD1A-207ENST00000598118 DEFB130AP0DP74 79 aa13.76□□□□□ -0.21
GRAMD1A-207ENST00000598118 TEX49A0A1B0GTD5 131 aa13.75□□□□□ -0.21
GRAMD1A-207ENST00000598118 LINC00482Q8N8I6 264 aa13.75□□□□□ -0.21
GRAMD1A-207ENST00000598118 LST1O00453 97 aa13.75□□□□□ -0.21
GRAMD1A-207ENST00000598118 CRLF1O75462 422 aa13.75□□□□□ -0.21
GRAMD1A-207ENST00000598118 GCN1Q92616 2671 aaKnown RBP13.75□□□□□ -0.21
GRAMD1A-207ENST00000598118 PF4P02776 101 aa13.74□□□□□ -0.21
GRAMD1A-207ENST00000598118 SPATA3Q8NHX4 192 aa13.74□□□□□ -0.21
GRAMD1A-207ENST00000598118 HERV-K104P63124 156 aa13.73□□□□□ -0.21
GRAMD1A-207ENST00000598118 C2orf82Q6UX34 121 aa13.73□□□□□ -0.21
GRAMD1A-207ENST00000598118 CHCHD5Q9BSY4 110 aa13.73□□□□□ -0.21
GRAMD1A-207ENST00000598118 NBEAL2Q6ZNJ1 2754 aa13.72□□□□□ -0.21
GRAMD1A-207ENST00000598118 VWFP04275 2813 aa13.72□□□□□ -0.21
GRAMD1A-207ENST00000598118 COX7B2Q8TF08 81 aa13.71□□□□□ -0.21
GRAMD1A-207ENST00000598118 LINC00612Q8N6U2 182 aa13.7□□□□□ -0.22
GRAMD1A-207ENST00000598118 KIR2DL5BQ8NHK3 375 aa13.7□□□□□ -0.22
GRAMD1A-207ENST00000598118 IGHV3OR16-9A0A0B4J2B5 98 aa13.7□□□□□ -0.22
GRAMD1A-207ENST00000598118 LY6G6DO95868 133 aa13.7□□□□□ -0.22
GRAMD1A-207ENST00000598118 TOMM7Q9P0U1 55 aa13.7□□□□□ -0.22
GRAMD1A-207ENST00000598118 X6R8D5 127 aa13.7□□□□□ -0.22
GRAMD1A-207ENST00000598118 SHISA2Q6UWI4 295 aa13.69□□□□□ -0.22
GRAMD1A-207ENST00000598118 H3BT86 120 aa13.69□□□□□ -0.22
GRAMD1A-207ENST00000598118 UBE2WQ96B02 151 aa13.69□□□□□ -0.22
GRAMD1A-207ENST00000598118 TMEM262E9PQX1 116 aa13.68□□□□□ -0.22
GRAMD1A-207ENST00000598118 NOTCH2Q04721 2471 aa13.68□□□□□ -0.22
GRAMD1A-207ENST00000598118 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
GRAMD1A-207ENST00000598118 HECTD1Q9ULT8 2610 aa13.67□□□□□ -0.22
GRAMD1A-207ENST00000598118 GYPEP15421 78 aa13.67□□□□□ -0.22
GRAMD1A-207ENST00000598118 C5orf38Q86SI9 138 aa13.66□□□□□ -0.22
GRAMD1A-207ENST00000598118 MIR7-3HGQ8N6C7 128 aa13.66□□□□□ -0.22
GRAMD1A-207ENST00000598118 COX7A2LO14548 114 aa13.65□□□□□ -0.22
GRAMD1A-207ENST00000598118 A0A087WZ39 114 aa13.64□□□□□ -0.23
GRAMD1A-207ENST00000598118 OTOGQ6ZRI0 2925 aa13.64□□□□□ -0.23
GRAMD1A-207ENST00000598118 LINC00959A0A1B0GUT2 108 aa13.64□□□□□ -0.23
GRAMD1A-207ENST00000598118 A0A096LPF7 62 aa13.62□□□□□ -0.23
GRAMD1A-207ENST00000598118 PPDPFQ9H3Y8 114 aa13.62□□□□□ -0.23
GRAMD1A-207ENST00000598118 FAM222AQ5U5X8 452 aa13.61□□□□□ -0.23
GRAMD1A-207ENST00000598118 IGKV2-28A0A075B6P5 120 aa13.61□□□□□ -0.23
GRAMD1A-207ENST00000598118 TRAV8-4A0A0B4J246 113 aa13.61□□□□□ -0.23
GRAMD1A-207ENST00000598118 IGKV2D-28P01615 120 aa13.61□□□□□ -0.23
GRAMD1A-207ENST00000598118 LINC00337Q8N6G1 96 aa13.61□□□□□ -0.23
GRAMD1A-207ENST00000598118 LINC00158P58513 81 aa13.6□□□□□ -0.23
GRAMD1A-207ENST00000598118 TENM1Q9UKZ4 2725 aa13.6□□□□□ -0.23
GRAMD1A-207ENST00000598118 INAFM1C9JVW0 142 aa13.6□□□□□ -0.23
GRAMD1A-207ENST00000598118 DEFB4AO15263 64 aa13.6□□□□□ -0.23
GRAMD1A-207ENST00000598118 CKS1BP61024 79 aa13.6□□□□□ -0.23
GRAMD1A-207ENST00000598118 FAM218AQ96MZ4 157 aa13.6□□□□□ -0.23
GRAMD1A-207ENST00000598118 PRO0255Q9UI72 69 aa13.6□□□□□ -0.23
GRAMD1A-207ENST00000598118 SMIM9A6NGZ8 99 aa13.59□□□□□ -0.23
GRAMD1A-207ENST00000598118 SND1-IT1Q9HBX3 110 aa13.59□□□□□ -0.23
GRAMD1A-207ENST00000598118 CLPSL2Q6UWE3 100 aa13.59□□□□□ -0.23
GRAMD1A-207ENST00000598118 NSD1Q96L73 2696 aaPredicted RBP13.58□□□□□ -0.24
GRAMD1A-207ENST00000598118 XCL1P47992 114 aa13.58□□□□□ -0.24
GRAMD1A-207ENST00000598118 DEFB135Q30KP9 77 aa13.58□□□□□ -0.24
GRAMD1A-207ENST00000598118 CITED1Q99966 193 aa13.58□□□□□ -0.24
GRAMD1A-207ENST00000598118 CCL18P55774 89 aa13.57□□□□□ -0.24
GRAMD1A-207ENST00000598118 DEFB121Q5J5C9 76 aa13.57□□□□□ -0.24
GRAMD1A-207ENST00000598118 A0A1B0GUV1 79 aa13.57□□□□□ -0.24
GRAMD1A-207ENST00000598118 A0A1B0GV72 72 aa13.57□□□□□ -0.24
GRAMD1A-207ENST00000598118 PFN2P35080 140 aa13.57□□□□□ -0.24
GRAMD1A-207ENST00000598118 C9orf66Q5T8R8 295 aa13.57□□□□□ -0.24
GRAMD1A-207ENST00000598118 C11orf68Q9H3H3 251 aaKnown RBP13.56□□□□□ -0.24
GRAMD1A-207ENST00000598118 TRAV13-2A0A0B4J235 113 aa13.56□□□□□ -0.24
GRAMD1A-207ENST00000598118 CRPP02741 224 aa13.56□□□□□ -0.24
GRAMD1A-207ENST00000598118 TRRAPQ9Y4A5 3859 aa13.55□□□□□ -0.24
GRAMD1A-207ENST00000598118 IBA57-AS1B1ANH7 110 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms