RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 HSBP1O75506 76 aa13.88□□□□□ -0.19
SYMPK-208ENST00000598059 NDUFA6P56556 154 aa13.88□□□□□ -0.19
SYMPK-208ENST00000598059 SMAGPQ0VAQ4 97 aa13.88□□□□□ -0.19
SYMPK-208ENST00000598059 PDZD11Q5EBL8 140 aa13.88□□□□□ -0.19
SYMPK-208ENST00000598059 Q6ZUT4 128 aa13.88□□□□□ -0.19
SYMPK-208ENST00000598059 FAM19A2Q8N3H0 131 aa13.88□□□□□ -0.19
SYMPK-208ENST00000598059 PRR34Q9NV39 138 aa13.88□□□□□ -0.19
SYMPK-208ENST00000598059 MRPS36P82909 103 aaKnown RBP13.87□□□□□ -0.19
SYMPK-208ENST00000598059 LINC00269Q8N2A0 174 aa13.87□□□□□ -0.19
SYMPK-208ENST00000598059 CIRBP-AS1Q8TBR5 109 aa13.87□□□□□ -0.19
SYMPK-208ENST00000598059 TMEM101Q96IK0 257 aa13.87□□□□□ -0.19
SYMPK-208ENST00000598059 IGLV4-3A0A075B6K6 122 aa13.86□□□□□ -0.19
SYMPK-208ENST00000598059 DGAT2L7PQ6IED9 249 aa13.86□□□□□ -0.19
SYMPK-208ENST00000598059 ZNF664Q8N3J9 261 aa13.86□□□□□ -0.19
SYMPK-208ENST00000598059 LINC01549A6NIU2 74 aa13.85□□□□□ -0.19
SYMPK-208ENST00000598059 KRTAP29-1A8MX34 341 aaPredicted RBP13.85□□□□□ -0.19
SYMPK-208ENST00000598059 MIAQ16674 131 aa13.85□□□□□ -0.19
SYMPK-208ENST00000598059 RNASE13Q5GAN3 156 aaKnown RBP13.85□□□□□ -0.19
SYMPK-208ENST00000598059 CLPSL2Q6UWE3 100 aa13.85□□□□□ -0.19
SYMPK-208ENST00000598059 ERASQ7Z444 233 aa13.85□□□□□ -0.19
SYMPK-208ENST00000598059 TIMM17AQ99595 171 aa13.85□□□□□ -0.19
SYMPK-208ENST00000598059 KRTAP10-4P60372 401 aaPredicted RBP13.84□□□□□ -0.19
SYMPK-208ENST00000598059 REG3AQ06141 175 aa13.84□□□□□ -0.19
SYMPK-208ENST00000598059 SCGB3A1Q96QR1 104 aa13.84□□□□□ -0.19
SYMPK-208ENST00000598059 USP17L23D6RBM5 183 aa13.83□□□□□ -0.2
SYMPK-208ENST00000598059 NPSP0C0P6 89 aa13.83□□□□□ -0.2
SYMPK-208ENST00000598059 LINC00173Q6ZV60 143 aa13.83□□□□□ -0.2
SYMPK-208ENST00000598059 TMEM141Q96I45 108 aa13.82□□□□□ -0.2
SYMPK-208ENST00000598059 FAT3Q8TDW7 4589 aa13.82□□□□□ -0.2
SYMPK-208ENST00000598059 ZC2HC1BQ5TFG8 222 aa13.81□□□□□ -0.2
SYMPK-208ENST00000598059 AMELXQ99217 191 aa13.81□□□□□ -0.2
SYMPK-208ENST00000598059 PRSS1P07477 247 aa13.8□□□□□ -0.2
SYMPK-208ENST00000598059 KRTAP26-1Q6PEX3 210 aa13.8□□□□□ -0.2
SYMPK-208ENST00000598059 IGKV3OR2-268A0A0C4DH90 116 aa13.79□□□□□ -0.2
SYMPK-208ENST00000598059 LINC00959A0A1B0GUT2 108 aa13.78□□□□□ -0.2
SYMPK-208ENST00000598059 PKHD1L1Q86WI1 4243 aa13.78□□□□□ -0.2
SYMPK-208ENST00000598059 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.77□□□□□ -0.21
SYMPK-208ENST00000598059 ATP5LO75964 103 aa13.77□□□□□ -0.21
SYMPK-208ENST00000598059 LEPROTL1O95214 131 aa13.76□□□□□ -0.21
SYMPK-208ENST00000598059 Q6ZN92 141 aa13.76□□□□□ -0.21
SYMPK-208ENST00000598059 TEX43Q6ZNM6 134 aa13.76□□□□□ -0.21
SYMPK-208ENST00000598059 VCX2Q9H322 139 aa13.76□□□□□ -0.21
SYMPK-208ENST00000598059 IGLV10-54A0A075B6I4 117 aa13.75□□□□□ -0.21
SYMPK-208ENST00000598059 TRAV8-4A0A0B4J246 113 aa13.75□□□□□ -0.21
SYMPK-208ENST00000598059 PAPPA-AS1Q5QFB9 102 aa13.75□□□□□ -0.21
SYMPK-208ENST00000598059 C9orf163Q8N9P6 203 aa13.75□□□□□ -0.21
SYMPK-208ENST00000598059 IFI27L1Q96BM0 104 aa13.75□□□□□ -0.21
SYMPK-208ENST00000598059 TRAV13-1A0A0B4J241 112 aa13.74□□□□□ -0.21
SYMPK-208ENST00000598059 IFITM10A6NMD0 228 aa13.74□□□□□ -0.21
SYMPK-208ENST00000598059 FABP4P15090 132 aa13.74□□□□□ -0.21
SYMPK-208ENST00000598059 HIST3H2BBQ8N257 126 aa13.74□□□□□ -0.21
SYMPK-208ENST00000598059 S100A6P06703 90 aa13.73□□□□□ -0.21
SYMPK-208ENST00000598059 UBE2D1P51668 147 aa13.73□□□□□ -0.21
SYMPK-208ENST00000598059 PMVKQ15126 192 aa13.73□□□□□ -0.21
SYMPK-208ENST00000598059 CST9LQ9H4G1 147 aa13.73□□□□□ -0.21
SYMPK-208ENST00000598059 C5orf52A6NGY3 159 aa13.72□□□□□ -0.21
SYMPK-208ENST00000598059 SNRPEP62304 92 aaKnown RBP13.72□□□□□ -0.21
SYMPK-208ENST00000598059 CHCHD10Q8WYQ3 142 aaPredicted RBP13.72□□□□□ -0.21
SYMPK-208ENST00000598059 PACRGQ96M98 296 aaPredicted RBP13.72□□□□□ -0.21
SYMPK-208ENST00000598059 CCL25O15444 150 aa13.71□□□□□ -0.21
SYMPK-208ENST00000598059 SS18Q15532 418 aa13.71□□□□□ -0.21
SYMPK-208ENST00000598059 FAM19A3Q7Z5A8 133 aa13.71□□□□□ -0.21
SYMPK-208ENST00000598059 C2orf88Q9BSF0 95 aa13.71□□□□□ -0.21
SYMPK-208ENST00000598059 HSPB8Q9UJY1 196 aa13.71□□□□□ -0.21
SYMPK-208ENST00000598059 HMCN2Q8NDA2 5059 aa13.71□□□□□ -0.21
SYMPK-208ENST00000598059 LINC00242Q5T6M2 205 aa13.7□□□□□ -0.22
SYMPK-208ENST00000598059 SDIM1Q6ZPB5 146 aa13.7□□□□□ -0.22
SYMPK-208ENST00000598059 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.7□□□□□ -0.22
SYMPK-208ENST00000598059 OXTP01178 125 aa13.69□□□□□ -0.22
SYMPK-208ENST00000598059 RPL37AP61513 92 aaKnown RBP13.69□□□□□ -0.22
SYMPK-208ENST00000598059 TMA7Q9Y2S6 64 aaKnown RBP13.69□□□□□ -0.22
SYMPK-208ENST00000598059 A0A0J9YXV3 536 aa13.68□□□□□ -0.22
SYMPK-208ENST00000598059 GAGE12HA6NDE8 117 aa13.68□□□□□ -0.22
SYMPK-208ENST00000598059 PANO1I0J062 215 aa13.68□□□□□ -0.22
SYMPK-208ENST00000598059 XCL1P47992 114 aa13.68□□□□□ -0.22
SYMPK-208ENST00000598059 COX6A2Q02221 97 aa13.68□□□□□ -0.22
SYMPK-208ENST00000598059 FOXI1Q12951 378 aa13.68□□□□□ -0.22
SYMPK-208ENST00000598059 TRAV12-1A0A0B4J245 112 aa13.67□□□□□ -0.22
SYMPK-208ENST00000598059 CNBPP62633 177 aaKnown RBP13.67□□□□□ -0.22
SYMPK-208ENST00000598059 CD164L2Q6UWJ8 174 aa13.67□□□□□ -0.22
SYMPK-208ENST00000598059 HIST1H2BLQ99880 126 aa13.67□□□□□ -0.22
SYMPK-208ENST00000598059 IGLV4-69A0A075B6H9 119 aa13.66□□□□□ -0.22
SYMPK-208ENST00000598059 hDV102S1A0JD36 115 aa13.66□□□□□ -0.22
SYMPK-208ENST00000598059 IGHV3OR16-9A0A0B4J2B5 98 aa13.65□□□□□ -0.22
SYMPK-208ENST00000598059 ODF1Q14990 250 aa13.64□□□□□ -0.23
SYMPK-208ENST00000598059 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
SYMPK-208ENST00000598059 MAP1LC3CQ9BXW4 147 aa13.64□□□□□ -0.23
SYMPK-208ENST00000598059 C3orf79P0CE67 100 aa13.63□□□□□ -0.23
SYMPK-208ENST00000598059 IGLC3P0DOY3 106 aa13.63□□□□□ -0.23
SYMPK-208ENST00000598059 S100A2P29034 98 aa13.63□□□□□ -0.23
SYMPK-208ENST00000598059 HNRNPA3P51991 378 aaKnown RBP13.63□□□□□ -0.23
SYMPK-208ENST00000598059 CHTOPQ9Y3Y2 248 aaKnown RBP13.63□□□□□ -0.23
SYMPK-208ENST00000598059 TINCRA0A1B0GVN0 87 aa13.62□□□□□ -0.23
SYMPK-208ENST00000598059 H0Y8G0 127 aa13.62□□□□□ -0.23
SYMPK-208ENST00000598059 SYS1-DBNDD2H3BUS1 97 aa13.62□□□□□ -0.23
SYMPK-208ENST00000598059 SLPIP03973 132 aa13.62□□□□□ -0.23
SYMPK-208ENST00000598059 CIRBPQ14011 172 aaKnown RBP13.62□□□□□ -0.23
SYMPK-208ENST00000598059 IGLV5-45A0A087WSX0 123 aa13.61□□□□□ -0.23
SYMPK-208ENST00000598059 SEC11AP67812 179 aa13.61□□□□□ -0.23
SYMPK-208ENST00000598059 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms