RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 RNASE13Q5GAN3 156 aaKnown RBP8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 TMEM136Q6ZRR5 245 aa8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 Q6ZUT4 128 aa8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 TMEM18Q96B42 140 aa8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 PRELID3AQ96N28 172 aa8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 RPL39P62891 51 aaKnown RBP8.48□□□□□ -1.05
SHKBP1-208ENST00000595726 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
SHKBP1-208ENST00000595726 C1orf196B1AJZ1 125 aa8.46□□□□□ -1.06
SHKBP1-208ENST00000595726 COMMD7Q86VX2 200 aa8.46□□□□□ -1.06
SHKBP1-208ENST00000595726 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
SHKBP1-208ENST00000595726 IMMP2LQ96T52 175 aa8.46□□□□□ -1.06
SHKBP1-208ENST00000595726 SEC11CQ9BY50 192 aa8.46□□□□□ -1.06
SHKBP1-208ENST00000595726 LAMTOR2Q9Y2Q5 125 aa8.46□□□□□ -1.06
SHKBP1-208ENST00000595726 TRAV13-1A0A0B4J241 112 aa8.45□□□□□ -1.06
SHKBP1-208ENST00000595726 IGHV1-58A0A0C4DH39 117 aa8.45□□□□□ -1.06
SHKBP1-208ENST00000595726 PRSS47A8MTI9 375 aa8.45□□□□□ -1.06
SHKBP1-208ENST00000595726 CTDSP1Q9GZU7 261 aa8.45□□□□□ -1.06
SHKBP1-208ENST00000595726 SPANXA1Q9NS26 97 aa8.45□□□□□ -1.06
SHKBP1-208ENST00000595726 MAP1LC3AQ9H492 121 aa8.44□□□□□ -1.06
SHKBP1-208ENST00000595726 A0A096LNI7 61 aa8.43□□□□□ -1.06
SHKBP1-208ENST00000595726 LOC389332A0A1B0GUA5 103 aa8.43□□□□□ -1.06
SHKBP1-208ENST00000595726 RAB5AP20339 215 aa8.43□□□□□ -1.06
SHKBP1-208ENST00000595726 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
SHKBP1-208ENST00000595726 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
SHKBP1-208ENST00000595726 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
SHKBP1-208ENST00000595726 COX7A2LO14548 114 aa8.42□□□□□ -1.06
SHKBP1-208ENST00000595726 PRR4Q16378 134 aa8.42□□□□□ -1.06
SHKBP1-208ENST00000595726 Q6ZRP5 223 aa8.42□□□□□ -1.06
SHKBP1-208ENST00000595726 TRAV9-1A0A075B6T8 112 aa8.41□□□□□ -1.06
SHKBP1-208ENST00000595726 MALP21145 153 aa8.41□□□□□ -1.06
SHKBP1-208ENST00000595726 IFI27P40305 119 aaPredicted RBP8.41□□□□□ -1.06
SHKBP1-208ENST00000595726 C10orf91Q5T1B1 145 aa8.41□□□□□ -1.06
SHKBP1-208ENST00000595726 SLC7A5P1Q8MH63 180 aa8.41□□□□□ -1.06
SHKBP1-208ENST00000595726 Q8N8P6 123 aa8.41□□□□□ -1.06
SHKBP1-208ENST00000595726 PRR26Q8N8Z3 221 aa8.41□□□□□ -1.06
SHKBP1-208ENST00000595726 IFITM10A6NMD0 228 aa8.4□□□□□ -1.06
SHKBP1-208ENST00000595726 ZNF561-AS1K7EIQ3 104 aa8.4□□□□□ -1.06
SHKBP1-208ENST00000595726 C5orf38Q86SI9 138 aa8.4□□□□□ -1.06
SHKBP1-208ENST00000595726 CARD19Q96LW7 228 aa8.4□□□□□ -1.06
SHKBP1-208ENST00000595726 CARHSP1Q9Y2V2 147 aaKnown RBP8.4□□□□□ -1.06
SHKBP1-208ENST00000595726 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
SHKBP1-208ENST00000595726 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
SHKBP1-208ENST00000595726 IGLV4-69A0A075B6H9 119 aa8.38□□□□□ -1.07
SHKBP1-208ENST00000595726 IGHV3OR16-9A0A0B4J2B5 98 aa8.38□□□□□ -1.07
SHKBP1-208ENST00000595726 S100PP25815 95 aa8.38□□□□□ -1.07
SHKBP1-208ENST00000595726 SYCNQ0VAF6 134 aa8.38□□□□□ -1.07
SHKBP1-208ENST00000595726 KIAA1644Q3SXP7 199 aa8.38□□□□□ -1.07
SHKBP1-208ENST00000595726 ORMDL2Q53FV1 153 aa8.38□□□□□ -1.07
SHKBP1-208ENST00000595726 C2orf66Q6UXQ4 117 aa8.38□□□□□ -1.07
SHKBP1-208ENST00000595726 CYSLTR1Q9Y271 337 aa8.38□□□□□ -1.07
SHKBP1-208ENST00000595726 K7EMI3 77 aa8.37□□□□□ -1.07
SHKBP1-208ENST00000595726 APOMO95445 188 aa8.37□□□□□ -1.07
SHKBP1-208ENST00000595726 S100A1P23297 94 aa8.37□□□□□ -1.07
SHKBP1-208ENST00000595726 RHEBQ15382 184 aa8.37□□□□□ -1.07
SHKBP1-208ENST00000595726 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
SHKBP1-208ENST00000595726 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
SHKBP1-208ENST00000595726 PSORS1C2Q9UIG4 136 aa8.37□□□□□ -1.07
SHKBP1-208ENST00000595726 SPAG11BQ08648 103 aa8.36□□□□□ -1.07
SHKBP1-208ENST00000595726 OR10D4PQ8NGN7 298 aa8.36□□□□□ -1.07
SHKBP1-208ENST00000595726 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
SHKBP1-208ENST00000595726 CAMK2N2Q96S95 79 aa8.36□□□□□ -1.07
SHKBP1-208ENST00000595726 GNB1LQ9BYB4 327 aa8.36□□□□□ -1.07
SHKBP1-208ENST00000595726 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
SHKBP1-208ENST00000595726 ATP6V1G1O75348 118 aa8.35□□□□□ -1.07
SHKBP1-208ENST00000595726 TEX43Q6ZNM6 134 aa8.35□□□□□ -1.07
SHKBP1-208ENST00000595726 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
SHKBP1-208ENST00000595726 RPS10P5Q9NQ39 176 aa8.35□□□□□ -1.07
SHKBP1-208ENST00000595726 TGIF2-C20orf24A0A0A6YYL0 155 aa8.34□□□□□ -1.07
SHKBP1-208ENST00000595726 NPSP0C0P6 89 aa8.34□□□□□ -1.07
SHKBP1-208ENST00000595726 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
SHKBP1-208ENST00000595726 ORAOV1Q8WV07 137 aa8.34□□□□□ -1.07
SHKBP1-208ENST00000595726 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
SHKBP1-208ENST00000595726 IGIPA6NJ69 53 aa8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 MT-ND6P03923 174 aa8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 UBE2D1P51668 147 aa8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 COX19Q49B96 90 aa8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 ZC2HC1BQ5TFG8 222 aa8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 Q6ZN92 141 aa8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 AMELXQ99217 191 aa8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 ALKBH7Q9BT30 221 aaPredicted RBP8.33□□□□□ -1.08
SHKBP1-208ENST00000595726 A0A087WZ39 114 aa8.32□□□□□ -1.08
SHKBP1-208ENST00000595726 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
SHKBP1-208ENST00000595726 PTTG1IPP53801 180 aa8.32□□□□□ -1.08
SHKBP1-208ENST00000595726 TOMM6Q96B49 74 aa8.32□□□□□ -1.08
SHKBP1-208ENST00000595726 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
SHKBP1-208ENST00000595726 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.31□□□□□ -1.08
SHKBP1-208ENST00000595726 APOC3P02656 99 aa8.31□□□□□ -1.08
SHKBP1-208ENST00000595726 TIMM17AQ99595 171 aa8.31□□□□□ -1.08
SHKBP1-208ENST00000595726 VCX2Q9H322 139 aa8.31□□□□□ -1.08
SHKBP1-208ENST00000595726 CRCT1Q9UGL9 99 aa8.31□□□□□ -1.08
SHKBP1-208ENST00000595726 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
SHKBP1-208ENST00000595726 LINC01546A6NGU7 62 aa8.3□□□□□ -1.08
SHKBP1-208ENST00000595726 F8WDY8 70 aa8.3□□□□□ -1.08
SHKBP1-208ENST00000595726 G0S2P27469 103 aa8.3□□□□□ -1.08
SHKBP1-208ENST00000595726 GAGE2BQ13066 116 aa8.3□□□□□ -1.08
SHKBP1-208ENST00000595726 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
SHKBP1-208ENST00000595726 FAM19A3Q7Z5A8 133 aa8.3□□□□□ -1.08
SHKBP1-208ENST00000595726 MRPL35Q9NZE8 188 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms