RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 IGLV2-18A0A075B6J9 118 aa9.8□□□□□ -0.84
SMARCA4-216ENST00000591545 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
SMARCA4-216ENST00000591545 HIGD2AQ9BW72 106 aa9.8□□□□□ -0.84
SMARCA4-216ENST00000591545 SPTBN4Q9H254 2564 aa9.79□□□□□ -0.84
SMARCA4-216ENST00000591545 TSHBP01222 138 aa9.79□□□□□ -0.84
SMARCA4-216ENST00000591545 C7orf33Q8WU49 177 aa9.79□□□□□ -0.84
SMARCA4-216ENST00000591545 USP17L23D6RBM5 183 aa9.79□□□□□ -0.84
SMARCA4-216ENST00000591545 C16orf95Q9H693 158 aa9.79□□□□□ -0.84
SMARCA4-216ENST00000591545 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
SMARCA4-216ENST00000591545 KLLNB2CW77 178 aa9.78□□□□□ -0.84
SMARCA4-216ENST00000591545 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
SMARCA4-216ENST00000591545 NUPR2A6NF83 97 aa9.78□□□□□ -0.84
SMARCA4-216ENST00000591545 C6orf99Q4VX62 202 aa9.77□□□□□ -0.84
SMARCA4-216ENST00000591545 RNASE3P12724 160 aaKnown RBP9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 TLN2Q9Y4G6 2542 aa9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 M0R2N4 97 aa9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 C2CD3Q4AC94 2353 aa9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 A0A087WZ39 114 aa9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 CD164L2Q6UWJ8 174 aa9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 FAM19A1Q7Z5A9 133 aa9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
SMARCA4-216ENST00000591545 SLPIP03973 132 aa9.76□□□□□ -0.85
SMARCA4-216ENST00000591545 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
SMARCA4-216ENST00000591545 USP9XQ93008 2570 aaPredicted RBP9.76□□□□□ -0.85
SMARCA4-216ENST00000591545 SVIPQ8NHG7 77 aa9.76□□□□□ -0.85
SMARCA4-216ENST00000591545 A0A0J9YWU9 116 aa9.76□□□□□ -0.85
SMARCA4-216ENST00000591545 SYCNQ0VAF6 134 aa9.75□□□□□ -0.85
SMARCA4-216ENST00000591545 DHRS4-AS1Q9P1J3 65 aa9.75□□□□□ -0.85
SMARCA4-216ENST00000591545 LRCOL1A6NCL2 159 aa9.75□□□□□ -0.85
SMARCA4-216ENST00000591545 CCKP06307 115 aa9.75□□□□□ -0.85
SMARCA4-216ENST00000591545 UBE2D4Q9Y2X8 147 aa9.75□□□□□ -0.85
SMARCA4-216ENST00000591545 MKI67P46013 3256 aaKnown RBP9.75□□□□□ -0.85
SMARCA4-216ENST00000591545 LELP1Q5T871 98 aa9.74□□□□□ -0.85
SMARCA4-216ENST00000591545 Q6Q795 121 aa9.74□□□□□ -0.85
SMARCA4-216ENST00000591545 COX17Q14061 63 aa9.74□□□□□ -0.85
SMARCA4-216ENST00000591545 M0R378 163 aa9.74□□□□□ -0.85
SMARCA4-216ENST00000591545 IGLV1-51P01701 117 aa9.74□□□□□ -0.85
SMARCA4-216ENST00000591545 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
SMARCA4-216ENST00000591545 ARHGAP32A7KAX9 2087 aa9.74□□□□□ -0.85
SMARCA4-216ENST00000591545 CASC2Q6XLA1 102 aa9.74□□□□□ -0.85
SMARCA4-216ENST00000591545 PLXNB1O43157 2135 aa9.73□□□□□ -0.85
SMARCA4-216ENST00000591545 COX7CP15954 63 aa9.73□□□□□ -0.85
SMARCA4-216ENST00000591545 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
SMARCA4-216ENST00000591545 UBE2D1P51668 147 aa9.72□□□□□ -0.85
SMARCA4-216ENST00000591545 CRIP2P52943 208 aaPredicted RBP9.72□□□□□ -0.85
SMARCA4-216ENST00000591545 Q6JHZ5 121 aa9.72□□□□□ -0.85
SMARCA4-216ENST00000591545 DCANP1Q8TF63 244 aa9.72□□□□□ -0.85
SMARCA4-216ENST00000591545 SCXQ7RTU7 201 aa9.72□□□□□ -0.85
SMARCA4-216ENST00000591545 MRPL55Q7Z7F7 128 aaKnown RBP9.72□□□□□ -0.85
SMARCA4-216ENST00000591545 C11orf21Q9P2W6 132 aa9.72□□□□□ -0.85
SMARCA4-216ENST00000591545 ZNF580Q9UK33 172 aa9.72□□□□□ -0.85
SMARCA4-216ENST00000591545 SPTSSBQ8NFR3 76 aa9.71□□□□□ -0.85
SMARCA4-216ENST00000591545 MPLKIPQ8TAP9 179 aa9.71□□□□□ -0.85
SMARCA4-216ENST00000591545 PRR15LQ9BU68 103 aa9.71□□□□□ -0.85
SMARCA4-216ENST00000591545 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
SMARCA4-216ENST00000591545 FN1P02751 2386 aaKnown RBP9.71□□□□□ -0.86
SMARCA4-216ENST00000591545 KIAA1549Q9HCM3 1950 aa9.71□□□□□ -0.86
SMARCA4-216ENST00000591545 PROK1P58294 105 aa9.7□□□□□ -0.86
SMARCA4-216ENST00000591545 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
SMARCA4-216ENST00000591545 PRR9Q5T870 116 aa9.7□□□□□ -0.86
SMARCA4-216ENST00000591545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-216ENST00000591545 Q6ZQY7 126 aa9.7□□□□□ -0.86
SMARCA4-216ENST00000591545 Q8N976 141 aa9.7□□□□□ -0.86
SMARCA4-216ENST00000591545 ADAMTS20P59510 1910 aa9.7□□□□□ -0.86
SMARCA4-216ENST00000591545 LINC00959A0A1B0GUT2 108 aa9.7□□□□□ -0.86
SMARCA4-216ENST00000591545 K7ERS5 55 aa9.69□□□□□ -0.86
SMARCA4-216ENST00000591545 Q8IZM0 81 aa9.69□□□□□ -0.86
SMARCA4-216ENST00000591545 SMIM11BQ8TCY0 68 aa9.69□□□□□ -0.86
SMARCA4-216ENST00000591545 CLUHP3Q96NS8 147 aa9.69□□□□□ -0.86
SMARCA4-216ENST00000591545 ZNF706Q9Y5V0 76 aaPredicted RBP9.69□□□□□ -0.86
SMARCA4-216ENST00000591545 IGLV4-69A0A075B6H9 119 aa9.69□□□□□ -0.86
SMARCA4-216ENST00000591545 CHD9Q3L8U1 2897 aa9.68□□□□□ -0.86
SMARCA4-216ENST00000591545 C1orf158Q8N1D5 194 aa9.68□□□□□ -0.86
SMARCA4-216ENST00000591545 IGIPA6NJ69 53 aa9.68□□□□□ -0.86
SMARCA4-216ENST00000591545 XGP55808 180 aa9.68□□□□□ -0.86
SMARCA4-216ENST00000591545 USP9YO00507 2555 aaPredicted RBP9.68□□□□□ -0.86
SMARCA4-216ENST00000591545 BRI3O95415 125 aa9.68□□□□□ -0.86
SMARCA4-216ENST00000591545 FAM19A5Q7Z5A7 132 aaPredicted RBP9.67□□□□□ -0.86
SMARCA4-216ENST00000591545 LINC00310P59036 64 aa9.67□□□□□ -0.86
SMARCA4-216ENST00000591545 UBE2D3P61077 147 aa9.67□□□□□ -0.86
SMARCA4-216ENST00000591545 UBE2D2P62837 147 aa9.67□□□□□ -0.86
SMARCA4-216ENST00000591545 A8MZ25 164 aa9.66□□□□□ -0.86
SMARCA4-216ENST00000591545 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
SMARCA4-216ENST00000591545 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
SMARCA4-216ENST00000591545 RETNQ9HD89 108 aa9.65□□□□□ -0.86
SMARCA4-216ENST00000591545 CDC42SE2Q9NRR3 84 aa9.65□□□□□ -0.86
SMARCA4-216ENST00000591545 DSCAML1Q8TD84 2053 aa9.65□□□□□ -0.87
SMARCA4-216ENST00000591545 ZNF73O43830 326 aaPredicted RBP9.64□□□□□ -0.87
SMARCA4-216ENST00000591545 RANBP2P49792 3224 aaKnown RBP9.64□□□□□ -0.87
SMARCA4-216ENST00000591545 C3orf84H3BNL1 204 aa9.64□□□□□ -0.87
SMARCA4-216ENST00000591545 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
SMARCA4-216ENST00000591545 HCFC1P51610 2035 aa9.63□□□□□ -0.87
SMARCA4-216ENST00000591545 A0A096LNI7 61 aa9.63□□□□□ -0.87
SMARCA4-216ENST00000591545 LOC107984640A0A0U1RRK4 108 aa9.63□□□□□ -0.87
SMARCA4-216ENST00000591545 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
SMARCA4-216ENST00000591545 LOC100131303A0A0U1RQF7 123 aa9.63□□□□□ -0.87
SMARCA4-216ENST00000591545 CCDC179H3BU77 68 aa9.63□□□□□ -0.87
SMARCA4-216ENST00000591545 POM121L12Q8N7R1 296 aa9.63□□□□□ -0.87
SMARCA4-216ENST00000591545 URB1-AS1Q96HZ7 61 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms