RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 SEC11AP67812 179 aa7.96□□□□□ -1.14
APOC1-206ENST00000590334 PRSS1P07477 247 aa7.95□□□□□ -1.14
APOC1-206ENST00000590334 FABP4P15090 132 aa7.95□□□□□ -1.14
APOC1-206ENST00000590334 COX6A2Q02221 97 aa7.95□□□□□ -1.14
APOC1-206ENST00000590334 A0A0J9YXV3 536 aa7.94□□□□□ -1.14
APOC1-206ENST00000590334 TINCRA0A1B0GVN0 87 aa7.94□□□□□ -1.14
APOC1-206ENST00000590334 S100A6P06703 90 aa7.94□□□□□ -1.14
APOC1-206ENST00000590334 HERVK_113P63121 156 aa7.94□□□□□ -1.14
APOC1-206ENST00000590334 WFDC2Q14508 124 aa7.94□□□□□ -1.14
APOC1-206ENST00000590334 IGLV5-45A0A087WSX0 123 aa7.93□□□□□ -1.14
APOC1-206ENST00000590334 A0A087WZ39 114 aa7.93□□□□□ -1.14
APOC1-206ENST00000590334 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
APOC1-206ENST00000590334 COX7A2LO14548 114 aa7.93□□□□□ -1.14
APOC1-206ENST00000590334 IGLC3P0DOY3 106 aa7.93□□□□□ -1.14
APOC1-206ENST00000590334 LINC01561Q8N1V8 128 aa7.93□□□□□ -1.14
APOC1-206ENST00000590334 HIST3H2BBQ8N257 126 aa7.93□□□□□ -1.14
APOC1-206ENST00000590334 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
APOC1-206ENST00000590334 IGLV4-69A0A075B6H9 119 aa7.92□□□□□ -1.14
APOC1-206ENST00000590334 A0A1B0GVY2 172 aa7.92□□□□□ -1.14
APOC1-206ENST00000590334 C5orf52A6NGY3 159 aa7.92□□□□□ -1.14
APOC1-206ENST00000590334 EREGO14944 169 aa7.92□□□□□ -1.14
APOC1-206ENST00000590334 C14orf177Q52M58 125 aa7.92□□□□□ -1.14
APOC1-206ENST00000590334 CFAP161Q6P656 301 aa7.92□□□□□ -1.14
APOC1-206ENST00000590334 Q8N814 137 aa7.92□□□□□ -1.14
APOC1-206ENST00000590334 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
APOC1-206ENST00000590334 IGHV1-58A0A0C4DH39 117 aa7.91□□□□□ -1.14
APOC1-206ENST00000590334 LECT2O14960 151 aa7.91□□□□□ -1.14
APOC1-206ENST00000590334 ODF1Q14990 250 aa7.91□□□□□ -1.14
APOC1-206ENST00000590334 SPATA12Q7Z6I5 190 aa7.91□□□□□ -1.14
APOC1-206ENST00000590334 C5orf38Q86SI9 138 aa7.91□□□□□ -1.14
APOC1-206ENST00000590334 GEMIN7Q9H840 131 aaKnown RBP7.91□□□□□ -1.14
APOC1-206ENST00000590334 CHTOPQ9Y3Y2 248 aaKnown RBP7.91□□□□□ -1.14
APOC1-206ENST00000590334 GVQW2A0A096LPI5 108 aaPredicted RBP7.9□□□□□ -1.14
APOC1-206ENST00000590334 F8VRH5 84 aa7.9□□□□□ -1.14
APOC1-206ENST00000590334 MALP21145 153 aa7.9□□□□□ -1.14
APOC1-206ENST00000590334 SNRPEP62304 92 aaKnown RBP7.9□□□□□ -1.14
APOC1-206ENST00000590334 CDKN2A-AS1Q9UH64 79 aa7.9□□□□□ -1.14
APOC1-206ENST00000590334 IGHV3-64A0A075B6Q5 118 aa7.89□□□□□ -1.15
APOC1-206ENST00000590334 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
APOC1-206ENST00000590334 APOMO95445 188 aa7.89□□□□□ -1.15
APOC1-206ENST00000590334 OR10D4PQ8NGN7 298 aa7.89□□□□□ -1.15
APOC1-206ENST00000590334 HIST1H2BLQ99880 126 aa7.89□□□□□ -1.15
APOC1-206ENST00000590334 CHAC1Q9BUX1 264 aa7.89□□□□□ -1.15
APOC1-206ENST00000590334 MRPL35Q9NZE8 188 aaKnown RBP7.89□□□□□ -1.15
APOC1-206ENST00000590334 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
APOC1-206ENST00000590334 C11orf86A6NJI1 115 aa7.88□□□□□ -1.15
APOC1-206ENST00000590334 H0Y8G0 127 aa7.88□□□□□ -1.15
APOC1-206ENST00000590334 C3orf79P0CE67 100 aa7.88□□□□□ -1.15
APOC1-206ENST00000590334 ZNF22P17026 224 aaPredicted RBP7.88□□□□□ -1.15
APOC1-206ENST00000590334 S100A2P29034 98 aa7.88□□□□□ -1.15
APOC1-206ENST00000590334 LINC00469Q8N7U9 141 aa7.88□□□□□ -1.15
APOC1-206ENST00000590334 NTN5Q8WTR8 489 aaPredicted RBP7.88□□□□□ -1.15
APOC1-206ENST00000590334 hDV102S1A0JD36 115 aa7.87□□□□□ -1.15
APOC1-206ENST00000590334 PLNP26678 52 aa7.87□□□□□ -1.15
APOC1-206ENST00000590334 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
APOC1-206ENST00000590334 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
APOC1-206ENST00000590334 SMIM1B2RUZ4 78 aa7.86□□□□□ -1.15
APOC1-206ENST00000590334 H3BRM9 83 aa7.86□□□□□ -1.15
APOC1-206ENST00000590334 KRTAP10-2P60368 255 aa7.86□□□□□ -1.15
APOC1-206ENST00000590334 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
APOC1-206ENST00000590334 HIGD2BQ4VC39 106 aa7.86□□□□□ -1.15
APOC1-206ENST00000590334 LINC01545Q5VT33 79 aa7.86□□□□□ -1.15
APOC1-206ENST00000590334 CDPF1Q6NVV7 123 aa7.86□□□□□ -1.15
APOC1-206ENST00000590334 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.85□□□□□ -1.15
APOC1-206ENST00000590334 F8WDY8 70 aa7.85□□□□□ -1.15
APOC1-206ENST00000590334 ZNF561-AS1K7EIQ3 104 aa7.85□□□□□ -1.15
APOC1-206ENST00000590334 DPM2O94777 84 aa7.85□□□□□ -1.15
APOC1-206ENST00000590334 SLPIP03973 132 aa7.85□□□□□ -1.15
APOC1-206ENST00000590334 KRTDAPP60985 99 aa7.85□□□□□ -1.15
APOC1-206ENST00000590334 KIAA0087Q14695 138 aa7.85□□□□□ -1.15
APOC1-206ENST00000590334 ORAOV1Q8WV07 137 aa7.85□□□□□ -1.15
APOC1-206ENST00000590334 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
APOC1-206ENST00000590334 IGKCP01834 107 aa7.84□□□□□ -1.15
APOC1-206ENST00000590334 SPAG11BQ08648 103 aa7.84□□□□□ -1.15
APOC1-206ENST00000590334 TMEM170BQ5T4T1 132 aa7.84□□□□□ -1.15
APOC1-206ENST00000590334 Q8IZM0 81 aa7.84□□□□□ -1.15
APOC1-206ENST00000590334 C2orf48Q96LS8 159 aa7.84□□□□□ -1.15
APOC1-206ENST00000590334 TMA7Q9Y2S6 64 aaKnown RBP7.84□□□□□ -1.15
APOC1-206ENST00000590334 TMEM223A0PJW6 202 aa7.83□□□□□ -1.16
APOC1-206ENST00000590334 SPINK8P0C7L1 97 aa7.83□□□□□ -1.16
APOC1-206ENST00000590334 PMCHL2Q9BQD1 86 aa7.83□□□□□ -1.16
APOC1-206ENST00000590334 DNAH5Q8TE73 4624 aa7.83□□□□□ -1.16
APOC1-206ENST00000590334 IGLV5-52A0A0A0MRZ9 124 aa7.82□□□□□ -1.16
APOC1-206ENST00000590334 C9orf163Q8N9P6 203 aa7.82□□□□□ -1.16
APOC1-206ENST00000590334 LINC00526Q96FQ7 95 aa7.82□□□□□ -1.16
APOC1-206ENST00000590334 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.81□□□□□ -1.16
APOC1-206ENST00000590334 C20orf202A1L168 122 aa7.81□□□□□ -1.16
APOC1-206ENST00000590334 FUSP35637 526 aaKnown RBP eCLIP7.81□□□□□ -1.16
APOC1-206ENST00000590334 AKR1D1P51857 326 aa7.81□□□□□ -1.16
APOC1-206ENST00000590334 SYCNQ0VAF6 134 aa7.81□□□□□ -1.16
APOC1-206ENST00000590334 COX7B2Q8TF08 81 aa7.81□□□□□ -1.16
APOC1-206ENST00000590334 EPPK1P58107 5090 aaKnown RBP7.81□□□□□ -1.16
APOC1-206ENST00000590334 PRSS2P07478 247 aa7.8□□□□□ -1.16
APOC1-206ENST00000590334 RNF151Q2KHN1 245 aa7.8□□□□□ -1.16
APOC1-206ENST00000590334 C6orf226Q5I0X4 101 aa7.8□□□□□ -1.16
APOC1-206ENST00000590334 CAMK2N2Q96S95 79 aa7.8□□□□□ -1.16
APOC1-206ENST00000590334 TOMM7Q9P0U1 55 aa7.8□□□□□ -1.16
APOC1-206ENST00000590334 NDUFA1O15239 70 aa7.79□□□□□ -1.16
APOC1-206ENST00000590334 GCSHP23434 173 aa7.79□□□□□ -1.16
APOC1-206ENST00000590334 CXCL5P42830 114 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms