RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-208	ENST00000589216	C5orf38	Q86SI9	138 aa		6.27	□□□□□ -1.41
PTPN2-208	ENST00000589216	PKHD1L1	Q86WI1	4243 aa		6.27	□□□□□ -1.41
PTPN2-208	ENST00000589216	TRAV9-1	A0A075B6T8	112 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216		A0A087WYN8	130 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	IGKV2-24	A0A0C4DH68	120 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	COX7A2L	O14548	114 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	PLA2G1B	P04054	148 aa	Known RBP	6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	IFI27	P40305	119 aa	Predicted RBP	6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	HNRNPA3	P51991	378 aa	Known RBP	6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	RHEB	Q15382	184 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	C2orf66	Q6UXQ4	117 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	LINC00173	Q6ZV60	143 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	CARD19	Q96LW7	228 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	RPS10P5	Q9NQ39	176 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	HERC1	Q15751	4861 aa		6.26	□□□□□ -1.41
PTPN2-208	ENST00000589216	IGLV4-69	A0A075B6H9	119 aa		6.25	□□□□□ -1.41
PTPN2-208	ENST00000589216	IGHV3OR16-9	A0A0B4J2B5	98 aa		6.25	□□□□□ -1.41
PTPN2-208	ENST00000589216		Q6ZRU5	148 aa		6.25	□□□□□ -1.41
PTPN2-208	ENST00000589216	CYSLTR1	Q9Y271	337 aa		6.25	□□□□□ -1.41
PTPN2-208	ENST00000589216	PYGO1	Q9Y3Y4	419 aa		6.25	□□□□□ -1.41
PTPN2-208	ENST00000589216	TGIF2-C20orf24	A0A0A6YYL0	155 aa		6.24	□□□□□ -1.41
PTPN2-208	ENST00000589216	MAL	P21145	153 aa		6.24	□□□□□ -1.41
PTPN2-208	ENST00000589216	S100P	P25815	95 aa		6.24	□□□□□ -1.41
PTPN2-208	ENST00000589216	SPAG11B	Q08648	103 aa		6.24	□□□□□ -1.41
PTPN2-208	ENST00000589216	SYCN	Q0VAF6	134 aa		6.24	□□□□□ -1.41
PTPN2-208	ENST00000589216	TMEM141	Q96I45	108 aa		6.24	□□□□□ -1.41
PTPN2-208	ENST00000589216	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.24	□□□□□ -1.41
PTPN2-208	ENST00000589216	IGIP	A6NJ69	53 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	ZNF561-AS1	K7EIQ3	104 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	APOC3	P02656	99 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	RPL37A	P61513	92 aa	Known RBP	6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	MAJIN	Q3KP22	176 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	ORMDL2	Q53FV1	153 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	LINC00242	Q5T6M2	205 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	ORAOV1	Q8WV07	137 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	GNB1L	Q9BYB4	327 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	MRPL18	Q9H0U6	180 aa	Known RBP	6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	NXT2	Q9NPJ8	142 aa	Known RBP	6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	PLAC8	Q9NZF1	115 aa		6.23	□□□□□ -1.41
PTPN2-208	ENST00000589216	LRP1	Q07954	4544 aa	Known RBP	6.22	□□□□□ -1.41
PTPN2-208	ENST00000589216		A0A0J9YXV3	536 aa		6.22	□□□□□ -1.41
PTPN2-208	ENST00000589216	UBE2D1	P51668	147 aa		6.22	□□□□□ -1.41
PTPN2-208	ENST00000589216	CAMK2N2	Q96S95	79 aa		6.22	□□□□□ -1.41
PTPN2-208	ENST00000589216	AMELX	Q99217	191 aa		6.22	□□□□□ -1.41
PTPN2-208	ENST00000589216	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	6.21	□□□□□ -1.42
PTPN2-208	ENST00000589216	C10orf25	Q5T742	122 aa		6.21	□□□□□ -1.42
PTPN2-208	ENST00000589216	TEX43	Q6ZNM6	134 aa		6.21	□□□□□ -1.42
PTPN2-208	ENST00000589216	STPG4	Q8N801	248 aa		6.21	□□□□□ -1.42
PTPN2-208	ENST00000589216	OR10D4P	Q8NGN7	298 aa		6.21	□□□□□ -1.42
PTPN2-208	ENST00000589216		A0A087WZ39	114 aa		6.2	□□□□□ -1.42
PTPN2-208	ENST00000589216	LINC01546	A6NGU7	62 aa		6.2	□□□□□ -1.42
PTPN2-208	ENST00000589216		K7EMI3	77 aa		6.2	□□□□□ -1.42
PTPN2-208	ENST00000589216	MT-ND6	P03923	174 aa		6.2	□□□□□ -1.42
PTPN2-208	ENST00000589216	FABP9	Q0Z7S8	132 aa		6.2	□□□□□ -1.42
PTPN2-208	ENST00000589216	TOMM6	Q96B49	74 aa		6.2	□□□□□ -1.42
PTPN2-208	ENST00000589216	C2orf48	Q96LS8	159 aa		6.2	□□□□□ -1.42
PTPN2-208	ENST00000589216	YPEL4	Q96NS1	127 aa		6.2	□□□□□ -1.42
PTPN2-208	ENST00000589216		A0A096LNJ9	63 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	APOM	O95445	188 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	PTTG1IP	P53801	180 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	GAGE2B	Q13066	116 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	KIAA0087	Q14695	138 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	COX19	Q49B96	90 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	UNQ6190/PRO20217	Q6UXQ8	127 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216		Q6ZN92	141 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	SVBP	Q8N300	66 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	URB1-AS1	Q96HZ7	61 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	TIMM17A	Q99595	171 aa		6.19	□□□□□ -1.42
PTPN2-208	ENST00000589216	FAT3	Q8TDW7	4589 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	LOC107984640	A0A0U1RRK4	108 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	SNAPIN	O95295	136 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	RPL18A	Q02543	176 aa	Known RBP	6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	C2orf82	Q6UX34	121 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	FAM19A3	Q7Z5A8	133 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	C18orf32	Q8TCD1	76 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	DPH3	Q96FX2	82 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	C2orf88	Q9BSF0	95 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	VCX2	Q9H322	139 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	C6orf48	Q9UBA6	75 aa		6.18	□□□□□ -1.42
PTPN2-208	ENST00000589216	NPS	P0C0P6	89 aa		6.17	□□□□□ -1.42
PTPN2-208	ENST00000589216	NDUFA5	Q16718	116 aa		6.17	□□□□□ -1.42
PTPN2-208	ENST00000589216	CBLN2	Q8IUK8	224 aa		6.17	□□□□□ -1.42
PTPN2-208	ENST00000589216	MRPL35	Q9NZE8	188 aa	Known RBP	6.17	□□□□□ -1.42
PTPN2-208	ENST00000589216	CDKN2A-AS1	Q9UH64	79 aa		6.17	□□□□□ -1.42
PTPN2-208	ENST00000589216	TRAPPC1	Q9Y5R8	145 aa		6.17	□□□□□ -1.42
PTPN2-208	ENST00000589216		A0A1W2PNN7	141 aa		6.16	□□□□□ -1.42
PTPN2-208	ENST00000589216	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.16	□□□□□ -1.42
PTPN2-208	ENST00000589216	NDUFA1	O15239	70 aa		6.16	□□□□□ -1.42
PTPN2-208	ENST00000589216	PRR3	P79522	188 aa	Known RBP	6.16	□□□□□ -1.42
PTPN2-208	ENST00000589216	PMCHL1	Q16048	86 aa		6.16	□□□□□ -1.42
PTPN2-208	ENST00000589216	FA2H	Q7L5A8	372 aa		6.16	□□□□□ -1.42
PTPN2-208	ENST00000589216	ERAS	Q7Z444	233 aa		6.16	□□□□□ -1.42
PTPN2-208	ENST00000589216	SCGB3A1	Q96QR1	104 aa		6.16	□□□□□ -1.42
PTPN2-208	ENST00000589216	RNF151	Q2KHN1	245 aa		6.15	□□□□□ -1.42
PTPN2-208	ENST00000589216	C9orf116	Q5BN46	136 aa	Predicted RBP	6.15	□□□□□ -1.42
PTPN2-208	ENST00000589216		Q6ZRP5	223 aa		6.15	□□□□□ -1.42
PTPN2-208	ENST00000589216	SLC7A5P1	Q8MH63	180 aa		6.15	□□□□□ -1.42
PTPN2-208	ENST00000589216	KRTAP4-8	Q9BYQ9	185 aa		6.15	□□□□□ -1.42
PTPN2-208	ENST00000589216	SMCO4	Q9NRQ5	59 aa		6.15	□□□□□ -1.42
PTPN2-208	ENST00000589216	LINC00474	Q9P2X8	69 aa		6.15	□□□□□ -1.42

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