RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MAPKAPK5-AS1Q8N8E1 139 aa7.78□□□□□ -1.16
SMAD4-205ENST00000588745 PLEKHB2Q96CS7 222 aa7.78□□□□□ -1.16
SMAD4-205ENST00000588745 TRAV8-3A0A0A6YYJ7 113 aa7.77□□□□□ -1.17
SMAD4-205ENST00000588745 MYMXA0A1B0GTQ4 84 aa7.77□□□□□ -1.17
SMAD4-205ENST00000588745 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
SMAD4-205ENST00000588745 CCL25O15444 150 aa7.77□□□□□ -1.17
SMAD4-205ENST00000588745 IGHV3-30-3P0DP02 117 aa7.77□□□□□ -1.17
SMAD4-205ENST00000588745 LGALS3P17931 250 aaKnown RBP7.77□□□□□ -1.17
SMAD4-205ENST00000588745 SS18Q15532 418 aa7.77□□□□□ -1.17
SMAD4-205ENST00000588745 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.17
SMAD4-205ENST00000588745 SMIM1B2RUZ4 78 aa7.76□□□□□ -1.17
SMAD4-205ENST00000588745 IGHV3-30P01768 117 aa7.76□□□□□ -1.17
SMAD4-205ENST00000588745 IGHV3-33P01772 117 aa7.76□□□□□ -1.17
SMAD4-205ENST00000588745 IGHV3-30-5P0DP03 117 aa7.76□□□□□ -1.17
SMAD4-205ENST00000588745 PRR34Q9NV39 138 aa7.76□□□□□ -1.17
SMAD4-205ENST00000588745 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
SMAD4-205ENST00000588745 IGLV5-39A0A0G2JS06 123 aa7.75□□□□□ -1.17
SMAD4-205ENST00000588745 HIGD1BQ9P298 99 aa7.75□□□□□ -1.17
SMAD4-205ENST00000588745 KLK12Q9UKR0 248 aa7.75□□□□□ -1.17
SMAD4-205ENST00000588745 DNAH7Q8WXX0 4024 aa7.75□□□□□ -1.17
SMAD4-205ENST00000588745 CRPP02741 224 aa7.74□□□□□ -1.17
SMAD4-205ENST00000588745 XCL1P47992 114 aa7.74□□□□□ -1.17
SMAD4-205ENST00000588745 CCL18P55774 89 aa7.74□□□□□ -1.17
SMAD4-205ENST00000588745 LINC01556Q5JQF7 62 aa7.74□□□□□ -1.17
SMAD4-205ENST00000588745 LINC00588Q9Y4M8 146 aa7.74□□□□□ -1.17
SMAD4-205ENST00000588745 A0A087WZ39 114 aa7.73□□□□□ -1.17
SMAD4-205ENST00000588745 NUPR2A6NF83 97 aa7.73□□□□□ -1.17
SMAD4-205ENST00000588745 M0R143 59 aa7.73□□□□□ -1.17
SMAD4-205ENST00000588745 EREGO14944 169 aa7.73□□□□□ -1.17
SMAD4-205ENST00000588745 DNAH10OSP0CZ25 163 aa7.73□□□□□ -1.17
SMAD4-205ENST00000588745 ZFAND6Q6FIF0 208 aa7.73□□□□□ -1.17
SMAD4-205ENST00000588745 CHCHD10Q8WYQ3 142 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-205ENST00000588745 STARD9Q9P2P6 4700 aa7.73□□□□□ -1.17
SMAD4-205ENST00000588745 HSD52Q0P140 79 aa7.72□□□□□ -1.17
SMAD4-205ENST00000588745 CD164L2Q6UWJ8 174 aa7.72□□□□□ -1.17
SMAD4-205ENST00000588745 ENHOQ6UWT2 76 aa7.72□□□□□ -1.17
SMAD4-205ENST00000588745 SCGB1D4Q6XE38 83 aa7.72□□□□□ -1.17
SMAD4-205ENST00000588745 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
SMAD4-205ENST00000588745 SNHG12Q9BXW3 62 aa7.72□□□□□ -1.17
SMAD4-205ENST00000588745 IGLV10-54A0A075B6I4 117 aa7.71□□□□□ -1.17
SMAD4-205ENST00000588745 MIAQ16674 131 aa7.71□□□□□ -1.17
SMAD4-205ENST00000588745 C5orf38Q86SI9 138 aa7.71□□□□□ -1.17
SMAD4-205ENST00000588745 LINC01561Q8N1V8 128 aa7.71□□□□□ -1.17
SMAD4-205ENST00000588745 UBE2WQ96B02 151 aa7.71□□□□□ -1.17
SMAD4-205ENST00000588745 NDUFA12Q9UI09 145 aa7.71□□□□□ -1.17
SMAD4-205ENST00000588745 APLNQ9ULZ1 77 aa7.71□□□□□ -1.17
SMAD4-205ENST00000588745 KLK5Q9Y337 293 aaPredicted RBP7.71□□□□□ -1.17
SMAD4-205ENST00000588745 TRAV8-4A0A0B4J246 113 aa7.71□□□□□ -1.18
SMAD4-205ENST00000588745 HINT1P49773 126 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-205ENST00000588745 C10orf126Q8N4M7 172 aa7.71□□□□□ -1.18
SMAD4-205ENST00000588745 COX7A2LO14548 114 aa7.7□□□□□ -1.18
SMAD4-205ENST00000588745 NDUFA1O15239 70 aa7.7□□□□□ -1.18
SMAD4-205ENST00000588745 FOXI1Q12951 378 aa7.7□□□□□ -1.18
SMAD4-205ENST00000588745 BATFQ16520 125 aa7.7□□□□□ -1.18
SMAD4-205ENST00000588745 COX7B2Q8TF08 81 aa7.7□□□□□ -1.18
SMAD4-205ENST00000588745 FBN3Q75N90 2809 aa7.7□□□□□ -1.18
SMAD4-205ENST00000588745 CSMD3Q7Z407 3707 aa7.69□□□□□ -1.18
SMAD4-205ENST00000588745 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
SMAD4-205ENST00000588745 GAGE12HA6NDE8 117 aa7.69□□□□□ -1.18
SMAD4-205ENST00000588745 TAL2Q16559 108 aa7.69□□□□□ -1.18
SMAD4-205ENST00000588745 BVES-AS1Q5T3Y7 98 aa7.69□□□□□ -1.18
SMAD4-205ENST00000588745 DNAH1Q9P2D7 4330 aa7.68□□□□□ -1.18
SMAD4-205ENST00000588745 Q9H8V8 135 aa7.68□□□□□ -1.18
SMAD4-205ENST00000588745 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-205ENST00000588745 TOMM7Q9P0U1 55 aa7.68□□□□□ -1.18
SMAD4-205ENST00000588745 TMEM238C9JI98 176 aa7.67□□□□□ -1.18
SMAD4-205ENST00000588745 MALP21145 153 aa7.67□□□□□ -1.18
SMAD4-205ENST00000588745 LBHQ53QV2 105 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-205ENST00000588745 UBE2DNLQ8IWF7 75 aa7.67□□□□□ -1.18
SMAD4-205ENST00000588745 Q8IZM0 81 aa7.67□□□□□ -1.18
SMAD4-205ENST00000588745 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-205ENST00000588745 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
SMAD4-205ENST00000588745 GCSHP23434 173 aa7.66□□□□□ -1.18
SMAD4-205ENST00000588745 CEND1Q8N111 149 aa7.66□□□□□ -1.18
SMAD4-205ENST00000588745 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
SMAD4-205ENST00000588745 C1orf43Q9BWL3 253 aa7.66□□□□□ -1.18
SMAD4-205ENST00000588745 IBA57-AS1B1ANH7 110 aa7.65□□□□□ -1.18
SMAD4-205ENST00000588745 APOMO95445 188 aa7.65□□□□□ -1.18
SMAD4-205ENST00000588745 PRSS2P07478 247 aa7.65□□□□□ -1.18
SMAD4-205ENST00000588745 HERV-K104P63124 156 aa7.65□□□□□ -1.18
SMAD4-205ENST00000588745 KRTAP26-1Q6PEX3 210 aa7.65□□□□□ -1.18
SMAD4-205ENST00000588745 SFTA2Q6UW10 78 aa7.65□□□□□ -1.18
SMAD4-205ENST00000588745 LITAFQ99732 161 aa7.65□□□□□ -1.18
SMAD4-205ENST00000588745 TM2D2Q9BX73 214 aa7.65□□□□□ -1.18
SMAD4-205ENST00000588745 TIMM17BO60830 172 aa7.64□□□□□ -1.19
SMAD4-205ENST00000588745 FXYD2P54710 66 aa7.64□□□□□ -1.19
SMAD4-205ENST00000588745 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
SMAD4-205ENST00000588745 LYSTQ99698 3801 aa7.64□□□□□ -1.19
SMAD4-205ENST00000588745 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
SMAD4-205ENST00000588745 K7EP13 123 aa7.63□□□□□ -1.19
SMAD4-205ENST00000588745 CXCL5P42830 114 aa7.63□□□□□ -1.19
SMAD4-205ENST00000588745 KIAA0087Q14695 138 aa7.63□□□□□ -1.19
SMAD4-205ENST00000588745 COL5A1-AS1Q5SY13 56 aa7.63□□□□□ -1.19
SMAD4-205ENST00000588745 CFAP161Q6P656 301 aa7.63□□□□□ -1.19
SMAD4-205ENST00000588745 Q9HAA7 133 aa7.63□□□□□ -1.19
SMAD4-205ENST00000588745 SPAG11BQ08648 103 aa7.62□□□□□ -1.19
SMAD4-205ENST00000588745 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
SMAD4-205ENST00000588745 MEIG1Q5JSS6 88 aa7.62□□□□□ -1.19
SMAD4-205ENST00000588745 SPANXDQ9BXN6 97 aa7.62□□□□□ -1.19
SMAD4-205ENST00000588745 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms