RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 UBE2D1P51668 147 aa7.24□□□□□ -1.25
NEDD4L-224ENST00000588712 UPK3BQ9BT76 320 aa7.24□□□□□ -1.25
NEDD4L-224ENST00000588712 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
NEDD4L-224ENST00000588712 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 GAGE12HA6NDE8 117 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 HERVK_113P61574 105 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 SS18Q15532 418 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 LINC01556Q5JQF7 62 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 ATOH7Q8N100 152 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 DNAH9Q9NYC9 4486 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 C11orf86A6NJI1 115 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 H3BRM9 83 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 RNASE13Q5GAN3 156 aaKnown RBP7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 CHAC1Q9BUX1 264 aa7.23□□□□□ -1.25
NEDD4L-224ENST00000588712 TRAV13-1A0A0B4J241 112 aa7.22□□□□□ -1.25
NEDD4L-224ENST00000588712 A0A0J9YXV3 536 aa7.22□□□□□ -1.25
NEDD4L-224ENST00000588712 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
NEDD4L-224ENST00000588712 ZC2HC1BQ5TFG8 222 aa7.22□□□□□ -1.25
NEDD4L-224ENST00000588712 WWC2-AS2Q96NR7 200 aa7.22□□□□□ -1.25
NEDD4L-224ENST00000588712 LINC00588Q9Y4M8 146 aa7.22□□□□□ -1.25
NEDD4L-224ENST00000588712 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.25
NEDD4L-224ENST00000588712 SIVA1O15304 175 aa7.21□□□□□ -1.25
NEDD4L-224ENST00000588712 DNAH10OSP0CZ25 163 aa7.21□□□□□ -1.25
NEDD4L-224ENST00000588712 REG3AQ06141 175 aa7.21□□□□□ -1.25
NEDD4L-224ENST00000588712 LINC00269Q8N2A0 174 aa7.21□□□□□ -1.25
NEDD4L-224ENST00000588712 MUC7Q8TAX7 377 aa7.21□□□□□ -1.25
NEDD4L-224ENST00000588712 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
NEDD4L-224ENST00000588712 CRPP02741 224 aa7.21□□□□□ -1.26
NEDD4L-224ENST00000588712 LINC00242Q5T6M2 205 aa7.21□□□□□ -1.26
NEDD4L-224ENST00000588712 WFDC10BQ8IUB3 73 aa7.21□□□□□ -1.26
NEDD4L-224ENST00000588712 UBE2DNLQ8IWF7 75 aa7.21□□□□□ -1.26
NEDD4L-224ENST00000588712 C10orf126Q8N4M7 172 aa7.21□□□□□ -1.26
NEDD4L-224ENST00000588712 PRR34Q9NV39 138 aa7.21□□□□□ -1.26
NEDD4L-224ENST00000588712 IGLV5-45A0A087WSX0 123 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 C9orf118A6NHY6 69 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 ERG28Q9UKR5 140 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 hDV102S1A0JD36 115 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 IGHV3-30P01768 117 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 IGHV3-33P01772 117 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 IGHV3-30-3P0DP02 117 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 IGHV3-30-5P0DP03 117 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 MIAQ16674 131 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 KLK12Q9UKR0 248 aa7.2□□□□□ -1.26
NEDD4L-224ENST00000588712 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
NEDD4L-224ENST00000588712 IGKV3OR2-268A0A0C4DH90 116 aa7.19□□□□□ -1.26
NEDD4L-224ENST00000588712 ZNF22P17026 224 aaPredicted RBP7.19□□□□□ -1.26
NEDD4L-224ENST00000588712 SS18L2Q9UHA2 77 aa7.19□□□□□ -1.26
NEDD4L-224ENST00000588712 E9PLD3 99 aa7.18□□□□□ -1.26
NEDD4L-224ENST00000588712 J3QR89 54 aa7.18□□□□□ -1.26
NEDD4L-224ENST00000588712 Q9H8V8 135 aa7.18□□□□□ -1.26
NEDD4L-224ENST00000588712 TMEM223A0PJW6 202 aa7.18□□□□□ -1.26
NEDD4L-224ENST00000588712 CD164L2Q6UWJ8 174 aa7.18□□□□□ -1.26
NEDD4L-224ENST00000588712 LINC01561Q8N1V8 128 aa7.18□□□□□ -1.26
NEDD4L-224ENST00000588712 PRKDCP78527 4128 aaKnown RBP7.18□□□□□ -1.26
NEDD4L-224ENST00000588712 TRAV8-3A0A0A6YYJ7 113 aa7.17□□□□□ -1.26
NEDD4L-224ENST00000588712 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
NEDD4L-224ENST00000588712 CDKN2A-AS1Q9UH64 79 aa7.17□□□□□ -1.26
NEDD4L-224ENST00000588712 C3orf84H3BNL1 204 aa7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 UBE2WQ96B02 151 aa7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 IGHV3OR16-9A0A0B4J2B5 98 aa7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 IGHV1-58A0A0C4DH39 117 aa7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 COX6A2Q02221 97 aa7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 SLC25A34Q6PIV7 304 aa7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 ENHOQ6UWT2 76 aa7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 CHCHD10Q8WYQ3 142 aaPredicted RBP7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 RMI2Q96E14 147 aa7.16□□□□□ -1.26
NEDD4L-224ENST00000588712 A0A087WZ39 114 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 A6NDN8 102 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 LEPROTO15243 131 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 COX8AP10176 69 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 XCL1P47992 114 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 NMUP48645 174 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 ZFAND6Q6FIF0 208 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 CLPSL2Q6UWE3 100 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
NEDD4L-224ENST00000588712 Q8N3U1 123 aa7.15□□□□□ -1.27
NEDD4L-224ENST00000588712 COX7A2LO14548 114 aa7.14□□□□□ -1.27
NEDD4L-224ENST00000588712 APOMO95445 188 aa7.14□□□□□ -1.27
NEDD4L-224ENST00000588712 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
NEDD4L-224ENST00000588712 TTC32Q5I0X7 151 aa7.14□□□□□ -1.27
NEDD4L-224ENST00000588712 C1orf43Q9BWL3 253 aa7.14□□□□□ -1.27
NEDD4L-224ENST00000588712 J3QQQ9 107 aa7.13□□□□□ -1.27
NEDD4L-224ENST00000588712 SFTA2Q6UW10 78 aa7.13□□□□□ -1.27
NEDD4L-224ENST00000588712 IGLV5-39A0A0G2JS06 123 aa7.13□□□□□ -1.27
NEDD4L-224ENST00000588712 MALP21145 153 aa7.13□□□□□ -1.27
NEDD4L-224ENST00000588712 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
NEDD4L-224ENST00000588712 IGLV10-54A0A075B6I4 117 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 A0A1W2PPM0 123 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 SMIM1B2RUZ4 78 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 SPINK8P0C7L1 97 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 C5orf47Q569G3 176 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 IGKV2D-26A0A0A0MRZ7 120 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 MYMXA0A1B0GTQ4 84 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 SMIM20Q8N5G0 67 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 TM2D2Q9BX73 214 aa7.12□□□□□ -1.27
NEDD4L-224ENST00000588712 A4D1N5 150 aa7.11□□□□□ -1.27
NEDD4L-224ENST00000588712 FOXI1Q12951 378 aa7.11□□□□□ -1.27
NEDD4L-224ENST00000588712 CASC10Q5T4H9 136 aa7.11□□□□□ -1.27
NEDD4L-224ENST00000588712 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms