RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 FAT2Q9NYQ8 4349 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 IGHV3OR16-9A0A0B4J2B5 98 aa5.97□□□□□ -1.45
CIRBP-218ENST00000588344 PRSS1P07477 247 aa5.97□□□□□ -1.45
CIRBP-218ENST00000588344 PMCHL1Q16048 86 aa5.97□□□□□ -1.45
CIRBP-218ENST00000588344 LINC00242Q5T6M2 205 aa5.97□□□□□ -1.45
CIRBP-218ENST00000588344 SPATA12Q7Z6I5 190 aa5.97□□□□□ -1.45
CIRBP-218ENST00000588344 IFI27L1Q96BM0 104 aa5.97□□□□□ -1.45
CIRBP-218ENST00000588344 HSPB8Q9UJY1 196 aa5.97□□□□□ -1.45
CIRBP-218ENST00000588344 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.96□□□□□ -1.46
CIRBP-218ENST00000588344 TINCRA0A1B0GVN0 87 aa5.96□□□□□ -1.46
CIRBP-218ENST00000588344 LECT2O14960 151 aa5.96□□□□□ -1.46
CIRBP-218ENST00000588344 LEPROTL1O95214 131 aa5.96□□□□□ -1.46
CIRBP-218ENST00000588344 COA6Q5JTJ3 125 aaKnown RBP5.96□□□□□ -1.46
CIRBP-218ENST00000588344 LINC00173Q6ZV60 143 aa5.96□□□□□ -1.46
CIRBP-218ENST00000588344 PACRGQ96M98 296 aaPredicted RBP5.96□□□□□ -1.46
CIRBP-218ENST00000588344 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.46
CIRBP-218ENST00000588344 A0A087WZ39 114 aa5.95□□□□□ -1.46
CIRBP-218ENST00000588344 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
CIRBP-218ENST00000588344 TRAV12-1A0A0B4J245 112 aa5.95□□□□□ -1.46
CIRBP-218ENST00000588344 hDV102S1A0JD36 115 aa5.95□□□□□ -1.46
CIRBP-218ENST00000588344 F8WDY8 70 aa5.95□□□□□ -1.46
CIRBP-218ENST00000588344 NDUFA6P56556 154 aa5.95□□□□□ -1.46
CIRBP-218ENST00000588344 FAM19A2Q8N3H0 131 aa5.95□□□□□ -1.46
CIRBP-218ENST00000588344 OR10D4PQ8NGN7 298 aa5.95□□□□□ -1.46
CIRBP-218ENST00000588344 HECTD4Q9Y4D8 3996 aa5.94□□□□□ -1.46
CIRBP-218ENST00000588344 GVQW2A0A096LPI5 108 aaPredicted RBP5.94□□□□□ -1.46
CIRBP-218ENST00000588344 C16orf90A8MZG2 172 aa5.94□□□□□ -1.46
CIRBP-218ENST00000588344 ZNF561-AS1K7EIQ3 104 aa5.94□□□□□ -1.46
CIRBP-218ENST00000588344 LINC00310P59036 64 aa5.94□□□□□ -1.46
CIRBP-218ENST00000588344 CNBPP62633 177 aaKnown RBP5.94□□□□□ -1.46
CIRBP-218ENST00000588344 WFDC2Q14508 124 aa5.94□□□□□ -1.46
CIRBP-218ENST00000588344 C5orf38Q86SI9 138 aa5.94□□□□□ -1.46
CIRBP-218ENST00000588344 IGHV3-64A0A075B6Q5 118 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 A0A0J9YXV3 536 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 H3BRM9 83 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 NUPR1O60356 82 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 GCSHP23434 173 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 KRTAP10-2P60368 255 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 COX6A2Q02221 97 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 ZC2HC1BQ5TFG8 222 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 C15orf56Q8N910 161 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 C2orf48Q96LS8 159 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 MAP1LC3CQ9BXW4 147 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 PKIGQ9Y2B9 76 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 PKD1P98161 4303 aa5.93□□□□□ -1.46
CIRBP-218ENST00000588344 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.92□□□□□ -1.46
CIRBP-218ENST00000588344 S100A6P06703 90 aa5.92□□□□□ -1.46
CIRBP-218ENST00000588344 IGLC3P0DOY3 106 aa5.92□□□□□ -1.46
CIRBP-218ENST00000588344 LINC00469Q8N7U9 141 aa5.92□□□□□ -1.46
CIRBP-218ENST00000588344 C9orf163Q8N9P6 203 aa5.92□□□□□ -1.46
CIRBP-218ENST00000588344 CDKN2A-AS1Q9UH64 79 aa5.92□□□□□ -1.46
CIRBP-218ENST00000588344 CHTOPQ9Y3Y2 248 aaKnown RBP5.92□□□□□ -1.46
CIRBP-218ENST00000588344 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
CIRBP-218ENST00000588344 PRSS2P07478 247 aa5.91□□□□□ -1.46
CIRBP-218ENST00000588344 FABP4P15090 132 aa5.91□□□□□ -1.46
CIRBP-218ENST00000588344 ORAOV1Q8WV07 137 aa5.91□□□□□ -1.46
CIRBP-218ENST00000588344 DNAH11Q96DT5 4516 aa5.91□□□□□ -1.46
CIRBP-218ENST00000588344 IGLV4-69A0A075B6H9 119 aa5.9□□□□□ -1.46
CIRBP-218ENST00000588344 F8VRH5 84 aa5.9□□□□□ -1.46
CIRBP-218ENST00000588344 PLNP26678 52 aa5.9□□□□□ -1.46
CIRBP-218ENST00000588344 SPAG11BQ08648 103 aa5.9□□□□□ -1.46
CIRBP-218ENST00000588344 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
CIRBP-218ENST00000588344 HIGD2BQ4VC39 106 aa5.9□□□□□ -1.46
CIRBP-218ENST00000588344 C6orf226Q5I0X4 101 aa5.9□□□□□ -1.46
CIRBP-218ENST00000588344 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
CIRBP-218ENST00000588344 AKR1D1P51857 326 aa5.89□□□□□ -1.47
CIRBP-218ENST00000588344 SYCNQ0VAF6 134 aa5.89□□□□□ -1.47
CIRBP-218ENST00000588344 Q8IZM0 81 aa5.89□□□□□ -1.47
CIRBP-218ENST00000588344 CAMK2N2Q96S95 79 aa5.89□□□□□ -1.47
CIRBP-218ENST00000588344 CHAC1Q9BUX1 264 aa5.89□□□□□ -1.47
CIRBP-218ENST00000588344 NDUFA1O15239 70 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 SLPIP03973 132 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 S100A2P29034 98 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 CXCL5P42830 114 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 CKS1BP61024 79 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 ODF1Q14990 250 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 TMEM170BQ5T4T1 132 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 SFTA2Q6UW10 78 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 PET117Q6UWS5 81 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 CARD19Q96LW7 228 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 MRPL35Q9NZE8 188 aaKnown RBP5.88□□□□□ -1.47
CIRBP-218ENST00000588344 LINC00474Q9P2X8 69 aa5.88□□□□□ -1.47
CIRBP-218ENST00000588344 SMIM1B2RUZ4 78 aa5.87□□□□□ -1.47
CIRBP-218ENST00000588344 SYS1-DBNDD2H3BUS1 97 aa5.87□□□□□ -1.47
CIRBP-218ENST00000588344 ZNF22P17026 224 aaPredicted RBP5.87□□□□□ -1.47
CIRBP-218ENST00000588344 KIAA0087Q14695 138 aa5.87□□□□□ -1.47
CIRBP-218ENST00000588344 SDIM1Q6ZPB5 146 aa5.87□□□□□ -1.47
CIRBP-218ENST00000588344 PKHD1P08F94 4074 aa5.87□□□□□ -1.47
CIRBP-218ENST00000588344 IGLV5-39A0A0G2JS06 123 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 TRBV30A0A0K0K1B3 111 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 C20orf202A1L168 122 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 C11orf86A6NJI1 115 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 H0Y8G0 127 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 DPM2O94777 84 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 IGKCP01834 107 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 COX7B2Q8TF08 81 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 TOMM7Q9P0U1 55 aa5.86□□□□□ -1.47
CIRBP-218ENST00000588344 CDK2AP2O75956 126 aa5.85□□□□□ -1.47
CIRBP-218ENST00000588344 SPINK8P0C7L1 97 aa5.85□□□□□ -1.47
CIRBP-218ENST00000588344 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms