RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 OPRPNQ99935 248 aaPredicted RBP4.09□□□□□ -1.75
SDF2-206ENST00000587788 PRO1854Q9UHT4 67 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 NOTCH1P46531 2555 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 IGHV3OR16-12A0A075B7B8 117 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 A0A0B4J2C4 111 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 A8MZ25 164 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 K7EIL1 84 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 IGHV3-30-3P0DP02 117 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 IFITM1P13164 125 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 TSPEAR-AS2P59090 65 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 UBE2D3P61077 147 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 UBE2D2P62837 147 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 CIRBPQ14011 172 aaKnown RBP4.08□□□□□ -1.76
SDF2-206ENST00000587788 C10orf126Q8N4M7 172 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 FAM104AQ969W3 186 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 TMEM101Q96IK0 257 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 VSIG2Q96IQ7 327 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 NAA38Q9BRA0 125 aaKnown RBP4.08□□□□□ -1.76
SDF2-206ENST00000587788 SPANXDQ9BXN6 97 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 SPANXCQ9NY87 97 aa4.08□□□□□ -1.76
SDF2-206ENST00000587788 TRGV2A0A075B6R0 118 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.07□□□□□ -1.76
SDF2-206ENST00000587788 IGKV2-29A2NJV5 120 aaPredicted RBP4.07□□□□□ -1.76
SDF2-206ENST00000587788 UBE2L6O14933 153 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 GIG44P09565 113 aaPredicted RBP4.07□□□□□ -1.76
SDF2-206ENST00000587788 ZFAND6Q6FIF0 208 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 Q6ZTI0 123 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 Q8N1X5 172 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 CSNK1G2-AS1Q8NCQ2 148 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 DEFB104AQ8WTQ1 72 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 VPS25Q9BRG1 176 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 TMEM243Q9BU79 118 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 PPDPFQ9H3Y8 114 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 NOP10Q9NPE3 64 aaKnown RBP4.07□□□□□ -1.76
SDF2-206ENST00000587788 NDUFA12Q9UI09 145 aa4.07□□□□□ -1.76
SDF2-206ENST00000587788 TRGV4A0A0C4DH28 118 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 M0QXV9 152 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 NDUFA1O15239 70 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 APOMO95445 188 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 TSPAN13O95857 204 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 PRM2P04554 102 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 CFC1BP0CG36 223 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 CFC1P0CG37 223 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 RPL35AP18077 110 aaKnown RBP4.06□□□□□ -1.76
SDF2-206ENST00000587788 MIAQ16674 131 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 Q6ZUT4 128 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 SBSPONQ8IVN8 264 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 ATP6V0E2Q8NHE4 81 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 MRAPQ8TCY5 172 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 ERG28Q9UKR5 140 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 SORL1Q92673 2214 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 AGRNO00468 2067 aa4.06□□□□□ -1.76
SDF2-206ENST00000587788 IGHV3-38A0A0C4DH36 116 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 LOC107984156A0A0G2JMH3 177 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 PLAC8L1A1L4L8 177 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 A4D1N5 150 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 H3BMG7 143 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 GAGE7O76087 117 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 GAGE12FP0CL80 117 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 GAGE12GP0CL81 117 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 GAGE12IP0CL82 117 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 HERV-K104P63124 156 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 CEMP1Q6PRD7 247 aaPredicted RBP4.05□□□□□ -1.76
SDF2-206ENST00000587788 SFTA2Q6UW10 78 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 MUSTN1Q8IVN3 82 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 ARL17AQ8IVW1 177 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 CDC42SE2Q9NRR3 84 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 Q9UF83 564 aa4.05□□□□□ -1.76
SDF2-206ENST00000587788 DNAH9Q9NYC9 4486 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 IGHV3-64A0A075B6Q5 118 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 TRAV8-3A0A0A6YYJ7 113 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 GAGE12JA6NER3 117 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 LYRM9A8MSI8 78 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 PRYO14603 147 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 IGHV3-33P01772 117 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 PRSS2P07478 247 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 COX6CP09669 75 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 SPINK8P0C7L1 97 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 SCGB1C2P0DMR2 95 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 PSMB2P49721 201 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 GAGE4Q13068 117 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 GAGE5Q13069 117 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 FHL2Q14192 279 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 LINC00242Q5T6M2 205 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 LINC00612Q8N6U2 182 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 LITAFQ99732 161 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 CDKN2A-AS1Q9UH64 79 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 PRO0461Q9UI25 63 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 COL7A1Q02388 2944 aa4.04□□□□□ -1.76
SDF2-206ENST00000587788 TRBV6-8A0A0A6YYG3 113 aa4.03□□□□□ -1.76
SDF2-206ENST00000587788 TRBV30A0A0K0K1B3 111 aa4.03□□□□□ -1.76
SDF2-206ENST00000587788 LINC00694P0DN24 101 aa4.03□□□□□ -1.76
SDF2-206ENST00000587788 IGHV4-30-4P0DP06 118 aa4.03□□□□□ -1.76
SDF2-206ENST00000587788 MIFP14174 115 aa4.03□□□□□ -1.76
SDF2-206ENST00000587788 WFDC2Q14508 124 aa4.03□□□□□ -1.76
SDF2-206ENST00000587788 RNASE13Q5GAN3 156 aaKnown RBP4.03□□□□□ -1.76
SDF2-206ENST00000587788 DEFB121Q5J5C9 76 aa4.03□□□□□ -1.76
SDF2-206ENST00000587788 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms