RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 STHQ8IWL8 128 aa11.65□□□□□ -0.54
RANBP3-209ENST00000587411 LINC00158P58513 81 aa11.65□□□□□ -0.54
RANBP3-209ENST00000587411 Q6ZTI0 123 aa11.65□□□□□ -0.54
RANBP3-209ENST00000587411 C14orf132Q9NPU4 83 aa11.65□□□□□ -0.54
RANBP3-209ENST00000587411 IBA57-AS1B1ANH7 110 aa11.64□□□□□ -0.55
RANBP3-209ENST00000587411 CCL18P55774 89 aa11.63□□□□□ -0.55
RANBP3-209ENST00000587411 RPS28P62857 69 aaKnown RBP11.63□□□□□ -0.55
RANBP3-209ENST00000587411 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
RANBP3-209ENST00000587411 TOMM7Q9P0U1 55 aa11.63□□□□□ -0.55
RANBP3-209ENST00000587411 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.557e-7■■■■□ 20.5
RANBP3-209ENST00000587411 FSHBP01225 129 aa11.63□□□□□ -0.55
RANBP3-209ENST00000587411 TRAV25A0A0B4J276 109 aa11.62□□□□□ -0.55
RANBP3-209ENST00000587411 C9orf129Q5T035 196 aaKnown RBP11.62□□□□□ -0.55
RANBP3-209ENST00000587411 LINC00846Q9NV44 126 aa11.62□□□□□ -0.55
RANBP3-209ENST00000587411 A0A096LNT2 108 aa11.61□□□□□ -0.55
RANBP3-209ENST00000587411 LECT2O14960 151 aa11.61□□□□□ -0.55
RANBP3-209ENST00000587411 KHDC1LQ5JSQ8 128 aa11.6□□□□□ -0.55
RANBP3-209ENST00000587411 SERP2Q8N6R1 65 aa11.6□□□□□ -0.55
RANBP3-209ENST00000587411 IGKV3D-7A0A0C4DH55 119 aa11.6□□□□□ -0.55
RANBP3-209ENST00000587411 hADV29S1A0JD25 119 aa11.6□□□□□ -0.55
RANBP3-209ENST00000587411 CREBBPQ92793 2442 aa11.6□□□□□ -0.55
RANBP3-209ENST00000587411 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
RANBP3-209ENST00000587411 IGHV3OR16-9A0A0B4J2B5 98 aa11.59□□□□□ -0.55
RANBP3-209ENST00000587411 CSPG4Q6UVK1 2322 aa11.58□□□□□ -0.56
RANBP3-209ENST00000587411 TRBV6-4A0A1B0GX49 114 aa11.58□□□□□ -0.56
RANBP3-209ENST00000587411 TMEM258P61165 79 aa11.58□□□□□ -0.56
RANBP3-209ENST00000587411 NOP10Q9NPE3 64 aaKnown RBP11.58□□□□□ -0.56
RANBP3-209ENST00000587411 ITPR1Q14643 2758 aa11.58□□□□□ -0.56
RANBP3-209ENST00000587411 A0A087WZ39 114 aa11.57□□□□□ -0.56
RANBP3-209ENST00000587411 PAX4O43316 350 aa11.57□□□□□ -0.56
RANBP3-209ENST00000587411 ORMDL1Q9P0S3 153 aa11.57□□□□□ -0.56
RANBP3-209ENST00000587411 VPS13CQ709C8 3753 aa11.57□□□□□ -0.56
RANBP3-209ENST00000587411 LY6G6DO95868 133 aa11.57□□□□□ -0.56
RANBP3-209ENST00000587411 NCR3O14931 201 aa11.56□□□□□ -0.56
RANBP3-209ENST00000587411 OR13C6PQ8NH95 151 aa11.56□□□□□ -0.56
RANBP3-209ENST00000587411 S100A7L2Q5SY68 101 aa11.55□□□□□ -0.56
RANBP3-209ENST00000587411 COL12A1Q99715 3063 aa11.55□□□□□ -0.56
RANBP3-209ENST00000587411 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
RANBP3-209ENST00000587411 FAM19A5Q7Z5A7 132 aaPredicted RBP11.55□□□□□ -0.56
RANBP3-209ENST00000587411 C16orf74Q96GX8 76 aa11.55□□□□□ -0.56
RANBP3-209ENST00000587411 TRGV2A0A075B6R0 118 aa11.54□□□□□ -0.56
RANBP3-209ENST00000587411 IGKV3OR2-268A0A0C4DH90 116 aa11.54□□□□□ -0.56
RANBP3-209ENST00000587411 CCKP06307 115 aa11.54□□□□□ -0.56
RANBP3-209ENST00000587411 PFN2P35080 140 aa11.54□□□□□ -0.56
RANBP3-209ENST00000587411 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
RANBP3-209ENST00000587411 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
RANBP3-209ENST00000587411 IGLV4-60A0A075B6I1 120 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 MAPK1IP1LQ8NDC0 245 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 PKD1L2Q7Z442 2459 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 TRBV6-8A0A0A6YYG3 113 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 LOC100131303A0A0U1RQF7 123 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 ATP5EP2Q5VTU8 51 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 LINC00167Q96N53 147 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 A0A087WVE0 104 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 C5orf47Q569G3 176 aa11.53□□□□□ -0.56
RANBP3-209ENST00000587411 JMJD7-PLA2G4BH0Y9G9 81 aa11.52□□□□□ -0.57
RANBP3-209ENST00000587411 SLPIP03973 132 aa11.52□□□□□ -0.57
RANBP3-209ENST00000587411 CYSTM1Q9H1C7 97 aa11.52□□□□□ -0.57
RANBP3-209ENST00000587411 TRGV4A0A0C4DH28 118 aa11.51□□□□□ -0.57
RANBP3-209ENST00000587411 SS18Q15532 418 aa11.51□□□□□ -0.57
RANBP3-209ENST00000587411 PLAC8L1A1L4L8 177 aa11.51□□□□□ -0.57
RANBP3-209ENST00000587411 SMIM9A6NGZ8 99 aa11.51□□□□□ -0.57
RANBP3-209ENST00000587411 TMEM86BQ8N661 226 aa11.51□□□□□ -0.57
RANBP3-209ENST00000587411 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
RANBP3-209ENST00000587411 C6orf226Q5I0X4 101 aa11.5□□□□□ -0.57
RANBP3-209ENST00000587411 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
RANBP3-209ENST00000587411 DPH3Q96FX2 82 aa11.49□□□□□ -0.57
RANBP3-209ENST00000587411 C11orf44Q8N8P7 122 aa11.49□□□□□ -0.57
RANBP3-209ENST00000587411 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
RANBP3-209ENST00000587411 CRYBG3Q68DQ2 2970 aa11.47□□□□□ -0.57
RANBP3-209ENST00000587411 GIG44P09565 113 aaPredicted RBP11.47□□□□□ -0.57
RANBP3-209ENST00000587411 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
RANBP3-209ENST00000587411 TMEM256-PLSCR3K7ERE1 68 aa11.47□□□□□ -0.57
RANBP3-209ENST00000587411 SPG11Q96JI7 2443 aa11.47□□□□□ -0.57
RANBP3-209ENST00000587411 ACACBO00763 2458 aa11.46□□□□□ -0.57
RANBP3-209ENST00000587411 Q8IZM0 81 aa11.46□□□□□ -0.57
RANBP3-209ENST00000587411 Q8N814 137 aa11.46□□□□□ -0.58
RANBP3-209ENST00000587411 FHL2Q14192 279 aa11.45□□□□□ -0.58
RANBP3-209ENST00000587411 A0A1W2PRX2 142 aa11.45□□□□□ -0.58
RANBP3-209ENST00000587411 TRBV10-3A0A0K0K1G6 114 aa11.44□□□□□ -0.58
RANBP3-209ENST00000587411 LYPD5Q6UWN5 251 aa11.44□□□□□ -0.58
RANBP3-209ENST00000587411 CCL24O00175 119 aa11.43□□□□□ -0.58
RANBP3-209ENST00000587411 NDUFC2O95298 119 aa11.43□□□□□ -0.58
RANBP3-209ENST00000587411 KIR2DL5BQ8NHK3 375 aa11.43□□□□□ -0.58
RANBP3-209ENST00000587411 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
RANBP3-209ENST00000587411 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
RANBP3-209ENST00000587411 NANOS2P60321 138 aaKnown RBP11.43□□□□□ -0.58
RANBP3-209ENST00000587411 GHRHP01286 108 aa11.42□□□□□ -0.58
RANBP3-209ENST00000587411 XCL1P47992 114 aa11.41□□□□□ -0.58
RANBP3-209ENST00000587411 UBL5Q9BZL1 73 aa11.41□□□□□ -0.58
RANBP3-209ENST00000587411 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.58
RANBP3-209ENST00000587411 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.58
RANBP3-209ENST00000587411 A0A1B0GUV1 79 aa11.4□□□□□ -0.59
RANBP3-209ENST00000587411 HILS1P60008 231 aa11.4□□□□□ -0.59
RANBP3-209ENST00000587411 COX17Q14061 63 aa11.4□□□□□ -0.59
RANBP3-209ENST00000587411 DSCR8Q96T75 97 aa11.4□□□□□ -0.59
RANBP3-209ENST00000587411 CFAP46Q8IYW2 2715 aa11.4□□□□□ -0.59
RANBP3-209ENST00000587411 RPL35AP18077 110 aaKnown RBP11.39□□□□□ -0.59
RANBP3-209ENST00000587411 ENHOQ6UWT2 76 aa11.38□□□□□ -0.59
RANBP3-209ENST00000587411 DOPEY1Q5JWR5 2465 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms