RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 RAB5AP20339 215 aa11.26□□□□□ -0.61
SRSF1-208ENST00000584773 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
SRSF1-208ENST00000584773 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
SRSF1-208ENST00000584773 IGLV4-3A0A075B6K6 122 aa11.25□□□□□ -0.61
SRSF1-208ENST00000584773 IGHV3OR16-9A0A0B4J2B5 98 aa11.25□□□□□ -0.61
SRSF1-208ENST00000584773 LOC107984640A0A0U1RRK4 108 aa11.25□□□□□ -0.61
SRSF1-208ENST00000584773 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.25□□□□□ -0.61
SRSF1-208ENST00000584773 MT1HL1P0DM35 61 aa11.25□□□□□ -0.61
SRSF1-208ENST00000584773 ZC2HC1BQ5TFG8 222 aa11.25□□□□□ -0.61
SRSF1-208ENST00000584773 ORAOV1Q8WV07 137 aa11.25□□□□□ -0.61
SRSF1-208ENST00000584773 MAP1LC3AQ9H492 121 aa11.25□□□□□ -0.61
SRSF1-208ENST00000584773 A0A1W2PNN7 141 aa11.24□□□□□ -0.61
SRSF1-208ENST00000584773 APOMO95445 188 aa11.24□□□□□ -0.61
SRSF1-208ENST00000584773 IFI27P40305 119 aaPredicted RBP11.24□□□□□ -0.61
SRSF1-208ENST00000584773 C2orf48Q96LS8 159 aa11.24□□□□□ -0.61
SRSF1-208ENST00000584773 LINC00474Q9P2X8 69 aa11.24□□□□□ -0.61
SRSF1-208ENST00000584773 TNXBP22105 4242 aa11.24□□□□□ -0.61
SRSF1-208ENST00000584773 PRSS47A8MTI9 375 aa11.23□□□□□ -0.61
SRSF1-208ENST00000584773 RPL18AQ02543 176 aaKnown RBP11.22□□□□□ -0.61
SRSF1-208ENST00000584773 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
SRSF1-208ENST00000584773 Q8N8P6 123 aa11.22□□□□□ -0.61
SRSF1-208ENST00000584773 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
SRSF1-208ENST00000584773 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
SRSF1-208ENST00000584773 OR10D4PQ8NGN7 298 aa11.21□□□□□ -0.61
SRSF1-208ENST00000584773 PYGO1Q9Y3Y4 419 aa11.21□□□□□ -0.61
SRSF1-208ENST00000584773 TMEM218A2RU14 115 aa11.2□□□□□ -0.62
SRSF1-208ENST00000584773 KIAA1644Q3SXP7 199 aa11.2□□□□□ -0.62
SRSF1-208ENST00000584773 LINC00242Q5T6M2 205 aa11.2□□□□□ -0.62
SRSF1-208ENST00000584773 C2orf66Q6UXQ4 117 aa11.2□□□□□ -0.62
SRSF1-208ENST00000584773 TMEM141Q96I45 108 aa11.2□□□□□ -0.62
SRSF1-208ENST00000584773 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
SRSF1-208ENST00000584773 LINC00173Q6ZV60 143 aa11.19□□□□□ -0.62
SRSF1-208ENST00000584773 CTDSP1Q9GZU7 261 aa11.19□□□□□ -0.62
SRSF1-208ENST00000584773 TGIF2-C20orf24A0A0A6YYL0 155 aa11.18□□□□□ -0.62
SRSF1-208ENST00000584773 C9orf116Q5BN46 136 aaPredicted RBP11.18□□□□□ -0.62
SRSF1-208ENST00000584773 SERTAD4-AS1Q5TG53 156 aa11.18□□□□□ -0.62
SRSF1-208ENST00000584773 CYSLTR1Q9Y271 337 aa11.18□□□□□ -0.62
SRSF1-208ENST00000584773 UBE2D1P51668 147 aa11.17□□□□□ -0.62
SRSF1-208ENST00000584773 UQCC3Q6UW78 93 aa11.17□□□□□ -0.62
SRSF1-208ENST00000584773 TEX43Q6ZNM6 134 aa11.17□□□□□ -0.62
SRSF1-208ENST00000584773 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
SRSF1-208ENST00000584773 C6orf48Q9UBA6 75 aa11.17□□□□□ -0.62
SRSF1-208ENST00000584773 A0A087WZ39 114 aa11.16□□□□□ -0.62
SRSF1-208ENST00000584773 KIAA0087Q14695 138 aa11.16□□□□□ -0.62
SRSF1-208ENST00000584773 IMMP2LQ96T52 175 aa11.16□□□□□ -0.62
SRSF1-208ENST00000584773 NDUFA1O15239 70 aa11.15□□□□□ -0.62
SRSF1-208ENST00000584773 RNF151Q2KHN1 245 aa11.15□□□□□ -0.62
SRSF1-208ENST00000584773 PHF5AQ7RTV0 110 aaKnown RBP11.15□□□□□ -0.62
SRSF1-208ENST00000584773 FAM168BA1KXE4 195 aa11.14□□□□□ -0.63
SRSF1-208ENST00000584773 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
SRSF1-208ENST00000584773 ODF1Q14990 250 aa11.14□□□□□ -0.63
SRSF1-208ENST00000584773 ORMDL2Q53FV1 153 aa11.14□□□□□ -0.63
SRSF1-208ENST00000584773 Q6ZRP5 223 aa11.14□□□□□ -0.63
SRSF1-208ENST00000584773 COMMD7Q86VX2 200 aa11.14□□□□□ -0.63
SRSF1-208ENST00000584773 AMELXQ99217 191 aa11.14□□□□□ -0.63
SRSF1-208ENST00000584773 NDUFA5Q16718 116 aa11.13□□□□□ -0.63
SRSF1-208ENST00000584773 C2orf82Q6UX34 121 aa11.13□□□□□ -0.63
SRSF1-208ENST00000584773 NXT2Q9NPJ8 142 aaKnown RBP11.13□□□□□ -0.63
SRSF1-208ENST00000584773 Q6ZN92 141 aa11.12□□□□□ -0.63
SRSF1-208ENST00000584773 C2orf88Q9BSF0 95 aa11.12□□□□□ -0.63
SRSF1-208ENST00000584773 SEC11CQ9BY50 192 aa11.12□□□□□ -0.63
SRSF1-208ENST00000584773 VCX2Q9H322 139 aa11.12□□□□□ -0.63
SRSF1-208ENST00000584773 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
SRSF1-208ENST00000584773 UBR4Q5T4S7 5183 aa11.12□□□□□ -0.63
SRSF1-208ENST00000584773 GAGE2EQ4V326 116 aa11.11□□□□□ -0.63
SRSF1-208ENST00000584773 GAGE2DQ9UEU5 116 aa11.11□□□□□ -0.63
SRSF1-208ENST00000584773 PSORS1C2Q9UIG4 136 aa11.11□□□□□ -0.63
SRSF1-208ENST00000584773 F8WDY8 70 aa11.1□□□□□ -0.63
SRSF1-208ENST00000584773 SRSF9Q13242 221 aaKnown RBP eCLIP11.1□□□□□ -0.631e-9■□□□□ 11.3
SRSF1-208ENST00000584773 K7EMI3 77 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 TLX1NBP0CAT3 122 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 SPINK6Q6UWN8 80 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 KRTAP11-1Q8IUC1 163 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 TRAV9-1A0A075B6T8 112 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 FAM19A5Q7Z5A7 132 aaPredicted RBP11.09□□□□□ -0.63
SRSF1-208ENST00000584773 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 LINC01600Q96MT4 127 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 TOMM7Q9P0U1 55 aa11.09□□□□□ -0.63
SRSF1-208ENST00000584773 MT-ND6P03923 174 aa11.07□□□□□ -0.64
SRSF1-208ENST00000584773 S100PP25815 95 aa11.07□□□□□ -0.64
SRSF1-208ENST00000584773 FAM19A3Q7Z5A8 133 aa11.07□□□□□ -0.64
SRSF1-208ENST00000584773 LINC01561Q8N1V8 128 aa11.07□□□□□ -0.64
SRSF1-208ENST00000584773 TIMM17AQ99595 171 aa11.07□□□□□ -0.64
SRSF1-208ENST00000584773 ALKBH7Q9BT30 221 aaPredicted RBP11.07□□□□□ -0.64
SRSF1-208ENST00000584773 GNB1LQ9BYB4 327 aa11.07□□□□□ -0.64
SRSF1-208ENST00000584773 NPSP0C0P6 89 aa11.06□□□□□ -0.64
SRSF1-208ENST00000584773 C1orf137Q5JT78 98 aa11.06□□□□□ -0.64
SRSF1-208ENST00000584773 CDKN2A-AS1Q9UH64 79 aa11.06□□□□□ -0.64
SRSF1-208ENST00000584773 TRBV30A0A0K0K1B3 111 aa11.05□□□□□ -0.64
SRSF1-208ENST00000584773 C10orf91Q5T1B1 145 aa11.05□□□□□ -0.64
SRSF1-208ENST00000584773 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
SRSF1-208ENST00000584773 RPS10P5Q9NQ39 176 aa11.05□□□□□ -0.64
SRSF1-208ENST00000584773 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
SRSF1-208ENST00000584773 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
SRSF1-208ENST00000584773 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
SRSF1-208ENST00000584773 NDUFC2-KCTD14E9PQ53 114 aa11.03□□□□□ -0.64
SRSF1-208ENST00000584773 PRSS2P07478 247 aa11.03□□□□□ -0.64
SRSF1-208ENST00000584773 HERVK_113P63121 156 aa11.03□□□□□ -0.64
SRSF1-208ENST00000584773 REG3GQ6UW15 175 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms