RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CST9LQ9H4G1 147 aa7.52□□□□□ -1.21
CDK5RAP3-210ENST00000578733 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
CDK5RAP3-210ENST00000578733 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 COX7A2LO14548 114 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 APOMO95445 188 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 LINC00173Q6ZV60 143 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 FAM19A3Q7Z5A8 133 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
CDK5RAP3-210ENST00000578733 PRSS29PA6NIE9 313 aa7.5□□□□□ -1.21
CDK5RAP3-210ENST00000578733 RTL8CO15255 209 aa7.5□□□□□ -1.21
CDK5RAP3-210ENST00000578733 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
CDK5RAP3-210ENST00000578733 H0Y8G0 127 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 H3BRM9 83 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 FOXI1Q12951 378 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 LINC00242Q5T6M2 205 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 ZC2HC1BQ5TFG8 222 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 F8VRH5 84 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 AKR1D1P51857 326 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 SNRPEP62304 92 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 HIST3H2BBQ8N257 126 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 IGHV3OR16-9A0A0B4J2B5 98 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 A0A0J9YXV3 536 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 C20orf202A1L168 122 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 IGLC3P0DOY3 106 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 KRTAP26-1Q6PEX3 210 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 LINC00469Q8N7U9 141 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 A0A087WTM6 91 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 A0A087WZ39 114 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 USP17L23D6RBM5 183 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 SYS1-DBNDD2H3BUS1 97 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PLNP26678 52 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PET117Q6UWS5 81 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 SPATA12Q7Z6I5 190 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C5orf38Q86SI9 138 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 OR10D4PQ8NGN7 298 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TMA7Q9Y2S6 64 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 LECT2O14960 151 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 KRTDAPP60985 99 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TNP2Q05952 138 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 Q8N814 137 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 MRPL35Q9NZE8 188 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGLV4-69A0A075B6H9 119 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 hDV102S1A0JD36 115 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 LRCOL1A6NCL2 159 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 DPM2O94777 84 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PRSS2P07478 247 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 COX6A2Q02221 97 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 ODF1Q14990 250 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TMEM170BQ5T4T1 132 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 MAPKAPK5-AS1Q8N8E1 139 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 NTN5Q8WTR8 489 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 ORAOV1Q8WV07 137 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 HIST1H2BLQ99880 126 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 CDKN2A-AS1Q9UH64 79 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 GVQW2A0A096LPI5 108 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGKCP01834 107 aa7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C3orf79P0CE67 100 aa7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 ZNF22P17026 224 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGHV3-64A0A075B6Q5 118 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C11orf86A6NJI1 115 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 F8WDY8 70 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 HERVK_113P61574 105 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 SPAG11BQ08648 103 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 CDPF1Q6NVV7 123 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PKD1P98161 4303 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 HIGD2BQ4VC39 106 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 LINC01545Q5VT33 79 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TOMM7Q9P0U1 55 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PKIGQ9Y2B9 76 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 DNAH11Q96DT5 4516 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 SPINK8P0C7L1 97 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 WFDC2Q14508 124 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 Q8IZM0 81 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 DNAH5Q8TE73 4624 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 DYNC1H1Q14204 4646 aaKnown RBP7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 SMIM1B2RUZ4 78 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 CXCL5P42830 114 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 CKS1BP61024 79 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 C6orf226Q5I0X4 101 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 COX7B2Q8TF08 81 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 CAMK2N2Q96S95 79 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 PMCHL2Q9BQD1 86 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
CDK5RAP3-210ENST00000578733 TMEM223A0PJW6 202 aa7.38□□□□□ -1.23
CDK5RAP3-210ENST00000578733 NDUFA1O15239 70 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms