RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 BAALC-AS2P0C853 105 aa12.18□□□□□ -0.46
TOM1L1-221ENST00000575882 GIG44P09565 113 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-221ENST00000575882 TMEM86BQ8N661 226 aa12.17□□□□□ -0.46
TOM1L1-221ENST00000575882 PPDPFQ9H3Y8 114 aa12.17□□□□□ -0.46
TOM1L1-221ENST00000575882 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
TOM1L1-221ENST00000575882 COX7B2Q8TF08 81 aa12.17□□□□□ -0.46
TOM1L1-221ENST00000575882 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
TOM1L1-221ENST00000575882 IGKV3OR2-268A0A0C4DH90 116 aa12.16□□□□□ -0.46
TOM1L1-221ENST00000575882 DNAJC9-AS1A6NH13 148 aa12.16□□□□□ -0.46
TOM1L1-221ENST00000575882 HIST2H2BCQ6DN03 193 aa12.16□□□□□ -0.46
TOM1L1-221ENST00000575882 TOMM7Q9P0U1 55 aa12.16□□□□□ -0.46
TOM1L1-221ENST00000575882 LRRK2Q5S007 2527 aa12.16□□□□□ -0.46
TOM1L1-221ENST00000575882 MIR7-3HGQ8N6C7 128 aa12.16□□□□□ -0.46
TOM1L1-221ENST00000575882 C16orf74Q96GX8 76 aa12.16□□□□□ -0.46
TOM1L1-221ENST00000575882 WFDC10AQ9H1F0 79 aa12.16□□□□□ -0.46
TOM1L1-221ENST00000575882 TRAV13-2A0A0B4J235 113 aa12.15□□□□□ -0.46
TOM1L1-221ENST00000575882 CRPP02741 224 aa12.15□□□□□ -0.46
TOM1L1-221ENST00000575882 LRRC75A-AS1Q8N1F1 130 aa12.15□□□□□ -0.46
TOM1L1-221ENST00000575882 ABCA12Q86UK0 2595 aa12.15□□□□□ -0.46
TOM1L1-221ENST00000575882 C22orf24Q9Y442 160 aa12.15□□□□□ -0.46
TOM1L1-221ENST00000575882 SMCR5Q8TEV8 140 aa12.14□□□□□ -0.47
TOM1L1-221ENST00000575882 CHCHD5Q9BSY4 110 aa12.14□□□□□ -0.47
TOM1L1-221ENST00000575882 TRBV6-4A0A1B0GX49 114 aa12.14□□□□□ -0.47
TOM1L1-221ENST00000575882 PF4P02776 101 aa12.14□□□□□ -0.47
TOM1L1-221ENST00000575882 RPL35AP18077 110 aaKnown RBP12.14□□□□□ -0.47
TOM1L1-221ENST00000575882 LINC00337Q8N6G1 96 aa12.14□□□□□ -0.47
TOM1L1-221ENST00000575882 EPG5Q9HCE0 2579 aa12.14□□□□□ -0.47
TOM1L1-221ENST00000575882 ZNF462Q96JM2 2506 aa12.13□□□□□ -0.47
TOM1L1-221ENST00000575882 RPL28P46779 137 aaKnown RBP12.13□□□□□ -0.47
TOM1L1-221ENST00000575882 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
TOM1L1-221ENST00000575882 Q9HAA7 133 aa12.13□□□□□ -0.47
TOM1L1-221ENST00000575882 SND1-IT1Q9HBX3 110 aa12.13□□□□□ -0.47
TOM1L1-221ENST00000575882 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
TOM1L1-221ENST00000575882 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
TOM1L1-221ENST00000575882 KRTAP1-3Q8IUG1 177 aa12.13□□□□□ -0.47
TOM1L1-221ENST00000575882 IGKV2-28A0A075B6P5 120 aa12.12□□□□□ -0.47
TOM1L1-221ENST00000575882 IGKV2D-28P01615 120 aa12.12□□□□□ -0.47
TOM1L1-221ENST00000575882 IGLV4-60A0A075B6I1 120 aa12.12□□□□□ -0.47
TOM1L1-221ENST00000575882 TLN2Q9Y4G6 2542 aa12.12□□□□□ -0.47
TOM1L1-221ENST00000575882 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
TOM1L1-221ENST00000575882 LINC00158P58513 81 aa12.11□□□□□ -0.47
TOM1L1-221ENST00000575882 ESM1Q9NQ30 184 aa12.11□□□□□ -0.47
TOM1L1-221ENST00000575882 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
TOM1L1-221ENST00000575882 LINC00643Q86TS7 51 aa12.1□□□□□ -0.47
TOM1L1-221ENST00000575882 IMUPQ9GZP8 106 aa12.1□□□□□ -0.47
TOM1L1-221ENST00000575882 TRBV6-8A0A0A6YYG3 113 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 MALP21145 153 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 OVOL2Q9BRP0 275 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 CUBNO60494 3623 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 IGHV3OR16-9A0A0B4J2B5 98 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 FAM236AA0A1B0GUQ0 79 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 FAM236BA0A1B0GV22 79 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 BBC3Q96PG8 261 aaPredicted RBP12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 ZFYVE26Q68DK2 2539 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 AKAP9Q99996 3911 aa12.09□□□□□ -0.47
TOM1L1-221ENST00000575882 SMIM11BQ8TCY0 68 aa12.08□□□□□ -0.48
TOM1L1-221ENST00000575882 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
TOM1L1-221ENST00000575882 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.48
TOM1L1-221ENST00000575882 CCL18P55774 89 aa12.08□□□□□ -0.48
TOM1L1-221ENST00000575882 CSNK1G2-AS1Q8NCQ2 148 aa12.08□□□□□ -0.48
TOM1L1-221ENST00000575882 FHL2Q14192 279 aa12.07□□□□□ -0.48
TOM1L1-221ENST00000575882 C19orf73Q9NVV2 129 aa12.07□□□□□ -0.48
TOM1L1-221ENST00000575882 A0A087WYN8 130 aa12.07□□□□□ -0.48
TOM1L1-221ENST00000575882 GAGE2AQ6NT46 116 aa12.07□□□□□ -0.48
TOM1L1-221ENST00000575882 SDIM1Q6ZPB5 146 aa12.07□□□□□ -0.48
TOM1L1-221ENST00000575882 C5orf38Q86SI9 138 aa12.06□□□□□ -0.48
TOM1L1-221ENST00000575882 UBR5O95071 2799 aaPredicted RBP12.06□□□□□ -0.48
TOM1L1-221ENST00000575882 SETXQ7Z333 2677 aaKnown RBP12.06□□□□□ -0.48
TOM1L1-221ENST00000575882 PFN2P35080 140 aa12.06□□□□□ -0.48
TOM1L1-221ENST00000575882 JMJD1CQ15652 2540 aa12.06□□□□□ -0.48
TOM1L1-221ENST00000575882 A0A087WZ39 114 aa12.05□□□□□ -0.48
TOM1L1-221ENST00000575882 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
TOM1L1-221ENST00000575882 DNAL4O96015 105 aa12.05□□□□□ -0.48
TOM1L1-221ENST00000575882 WFDC11Q8NEX6 87 aa12.05□□□□□ -0.48
TOM1L1-221ENST00000575882 ZNF469Q96JG9 3925 aaPredicted RBP12.05□□□□□ -0.48
TOM1L1-221ENST00000575882 IGLV1-51P01701 117 aa12.04□□□□□ -0.48
TOM1L1-221ENST00000575882 LINC01006Q8NI28 216 aa12.04□□□□□ -0.48
TOM1L1-221ENST00000575882 NF1P21359 2839 aa12.03□□□□□ -0.48
TOM1L1-221ENST00000575882 ZNF843Q8N446 348 aa12.02□□□□□ -0.48
TOM1L1-221ENST00000575882 C11orf68Q9H3H3 251 aaKnown RBP12.02□□□□□ -0.48
TOM1L1-221ENST00000575882 NIPBLQ6KC79 2804 aaeCLIP12.02□□□□□ -0.48
TOM1L1-221ENST00000575882 H0YGX0 51 aa12.02□□□□□ -0.49
TOM1L1-221ENST00000575882 PAX4O43316 350 aa12.02□□□□□ -0.49
TOM1L1-221ENST00000575882 ITPR3Q14573 2671 aa12.02□□□□□ -0.49
TOM1L1-221ENST00000575882 LINC00959A0A1B0GUT2 108 aa12.01□□□□□ -0.49
TOM1L1-221ENST00000575882 ATP5G1P05496 136 aa12.01□□□□□ -0.49
TOM1L1-221ENST00000575882 C9orf129Q5T035 196 aaKnown RBP12.01□□□□□ -0.49
TOM1L1-221ENST00000575882 DEFB130BP0DP73 79 aa12□□□□□ -0.49
TOM1L1-221ENST00000575882 DEFB130AP0DP74 79 aa12□□□□□ -0.49
TOM1L1-221ENST00000575882 OR13C6PQ8NH95 151 aa12□□□□□ -0.49
TOM1L1-221ENST00000575882 USP24Q9UPU5 2620 aa12□□□□□ -0.49
TOM1L1-221ENST00000575882 LECT2O14960 151 aa11.99□□□□□ -0.49
TOM1L1-221ENST00000575882 C6orf226Q5I0X4 101 aa11.99□□□□□ -0.49
TOM1L1-221ENST00000575882 C3orf56Q8N813 242 aa11.99□□□□□ -0.49
TOM1L1-221ENST00000575882 C14orf132Q9NPU4 83 aa11.99□□□□□ -0.49
TOM1L1-221ENST00000575882 APCP25054 2843 aa11.99□□□□□ -0.49
TOM1L1-221ENST00000575882 SETD2Q9BYW2 2564 aaPredicted RBP11.98□□□□□ -0.49
TOM1L1-221ENST00000575882 CXCL5P42830 114 aa11.98□□□□□ -0.49
TOM1L1-221ENST00000575882 XCL1P47992 114 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1133.2 ms