RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 PPP1R17O96001 155 aa6.63□□□□□ -1.35
CHMP6-202ENST00000571457 RPL28P46779 137 aaKnown RBP6.63□□□□□ -1.35
CHMP6-202ENST00000571457 LINC01547P58512 204 aaPredicted RBP6.63□□□□□ -1.35
CHMP6-202ENST00000571457 RETNLBQ9BQ08 111 aa6.63□□□□□ -1.35
CHMP6-202ENST00000571457 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
CHMP6-202ENST00000571457 TRBV30A0A0K0K1B3 111 aa6.62□□□□□ -1.35
CHMP6-202ENST00000571457 KANTRA0A1W2PQU2 76 aa6.62□□□□□ -1.35
CHMP6-202ENST00000571457 LBHQ53QV2 105 aaPredicted RBP6.62□□□□□ -1.35
CHMP6-202ENST00000571457 TMEM191AQ9H0A3 160 aa6.62□□□□□ -1.35
CHMP6-202ENST00000571457 K7EN84 100 aa6.61□□□□□ -1.35
CHMP6-202ENST00000571457 GATCO43716 136 aaKnown RBP6.61□□□□□ -1.35
CHMP6-202ENST00000571457 C9orf129Q5T035 196 aaKnown RBP6.61□□□□□ -1.35
CHMP6-202ENST00000571457 OCC1Q8TAD7 63 aa6.61□□□□□ -1.35
CHMP6-202ENST00000571457 CTDSP1Q9GZU7 261 aa6.61□□□□□ -1.35
CHMP6-202ENST00000571457 A0A1B0GUT8 65 aa6.6□□□□□ -1.35
CHMP6-202ENST00000571457 RAB4AP20338 218 aa6.6□□□□□ -1.35
CHMP6-202ENST00000571457 SUMO2P61956 95 aaKnown RBP6.6□□□□□ -1.35
CHMP6-202ENST00000571457 LINC00173Q6ZV60 143 aa6.6□□□□□ -1.35
CHMP6-202ENST00000571457 LINC00304Q8N9R0 145 aa6.6□□□□□ -1.35
CHMP6-202ENST00000571457 PACRGQ96M98 296 aaPredicted RBP6.6□□□□□ -1.35
CHMP6-202ENST00000571457 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
CHMP6-202ENST00000571457 PPP1R2P9O14990 202 aa6.59□□□□□ -1.35
CHMP6-202ENST00000571457 TCAPO15273 167 aa6.59□□□□□ -1.35
CHMP6-202ENST00000571457 TAGLN2P37802 199 aaKnown RBP6.59□□□□□ -1.35
CHMP6-202ENST00000571457 CTAG1AP78358 180 aa6.59□□□□□ -1.35
CHMP6-202ENST00000571457 CT83Q5H943 113 aa6.59□□□□□ -1.35
CHMP6-202ENST00000571457 IFITM10A6NMD0 228 aa6.58□□□□□ -1.36
CHMP6-202ENST00000571457 HMSDA8MTL9 139 aa6.58□□□□□ -1.36
CHMP6-202ENST00000571457 BCE1O60756 84 aa6.58□□□□□ -1.36
CHMP6-202ENST00000571457 KIAA0087Q14695 138 aa6.58□□□□□ -1.36
CHMP6-202ENST00000571457 FAM231DQ6ZW35 169 aa6.58□□□□□ -1.36
CHMP6-202ENST00000571457 AMN1Q8IY45 258 aa6.58□□□□□ -1.36
CHMP6-202ENST00000571457 SPANXA1Q9NS26 97 aa6.58□□□□□ -1.36
CHMP6-202ENST00000571457 C22orf24Q9Y442 160 aa6.58□□□□□ -1.36
CHMP6-202ENST00000571457 SMLR1H3BR10 107 aa6.57□□□□□ -1.36
CHMP6-202ENST00000571457 HBBP68871 147 aa6.57□□□□□ -1.36
CHMP6-202ENST00000571457 HIGD1CA8MV81 97 aa6.56□□□□□ -1.36
CHMP6-202ENST00000571457 SMKR1H3BMG3 65 aa6.56□□□□□ -1.36
CHMP6-202ENST00000571457 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
CHMP6-202ENST00000571457 FAM229BQ4G0N7 80 aa6.56□□□□□ -1.36
CHMP6-202ENST00000571457 KRTAP13-2Q52LG2 175 aa6.56□□□□□ -1.36
CHMP6-202ENST00000571457 C2orf82Q6UX34 121 aa6.56□□□□□ -1.36
CHMP6-202ENST00000571457 NRACQ8N912 160 aa6.56□□□□□ -1.36
CHMP6-202ENST00000571457 RPL39P62891 51 aaKnown RBP6.55□□□□□ -1.36
CHMP6-202ENST00000571457 PPDPFQ9H3Y8 114 aa6.55□□□□□ -1.36
CHMP6-202ENST00000571457 TP73-AS1Q9UF72 201 aa6.55□□□□□ -1.36
CHMP6-202ENST00000571457 IGKV2D-26A0A0A0MRZ7 120 aa6.54□□□□□ -1.36
CHMP6-202ENST00000571457 ZNF727A8MUV8 499 aa6.54□□□□□ -1.36
CHMP6-202ENST00000571457 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
CHMP6-202ENST00000571457 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
CHMP6-202ENST00000571457 C20orf78Q9BR46 151 aa6.54□□□□□ -1.36
CHMP6-202ENST00000571457 ANAPC11Q9NYG5 84 aa6.54□□□□□ -1.36
CHMP6-202ENST00000571457 CKS1BP61024 79 aa6.53□□□□□ -1.36
CHMP6-202ENST00000571457 RPL32P62910 135 aaKnown RBP6.53□□□□□ -1.36
CHMP6-202ENST00000571457 SRSF3P84103 164 aaKnown RBP6.53□□□□□ -1.36
CHMP6-202ENST00000571457 RIGQ13278 110 aa6.53□□□□□ -1.36
CHMP6-202ENST00000571457 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
CHMP6-202ENST00000571457 LINC01561Q8N1V8 128 aa6.53□□□□□ -1.36
CHMP6-202ENST00000571457 LINC00337Q8N6G1 96 aa6.53□□□□□ -1.36
CHMP6-202ENST00000571457 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
CHMP6-202ENST00000571457 PRSS2P07478 247 aa6.52□□□□□ -1.37
CHMP6-202ENST00000571457 LINC00469Q8N7U9 141 aa6.52□□□□□ -1.37
CHMP6-202ENST00000571457 XAGE1AQ9HD64 81 aa6.52□□□□□ -1.37
CHMP6-202ENST00000571457 TRBV24-1A0A075B6N3 115 aa6.51□□□□□ -1.37
CHMP6-202ENST00000571457 LINC00862A6NCI5 91 aa6.51□□□□□ -1.37
CHMP6-202ENST00000571457 ASB16-AS1Q495Z4 193 aa6.51□□□□□ -1.37
CHMP6-202ENST00000571457 IFI27P40305 119 aaPredicted RBP6.5□□□□□ -1.37
CHMP6-202ENST00000571457 UBE2AP49459 152 aa6.5□□□□□ -1.37
CHMP6-202ENST00000571457 C6orf226Q5I0X4 101 aa6.5□□□□□ -1.37
CHMP6-202ENST00000571457 FAM104BQ5XKR9 115 aa6.5□□□□□ -1.37
CHMP6-202ENST00000571457 FP248Q71RG6 208 aaPredicted RBP6.5□□□□□ -1.37
CHMP6-202ENST00000571457 CKS2P33552 79 aa6.49□□□□□ -1.37
CHMP6-202ENST00000571457 MRPL51Q4U2R6 128 aaKnown RBP6.49□□□□□ -1.37
CHMP6-202ENST00000571457 Q6ZN92 141 aa6.49□□□□□ -1.37
CHMP6-202ENST00000571457 LINC00167Q96N53 147 aa6.49□□□□□ -1.37
CHMP6-202ENST00000571457 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
CHMP6-202ENST00000571457 TOMM7Q9P0U1 55 aa6.49□□□□□ -1.37
CHMP6-202ENST00000571457 RPL37AP8A6NKH3 93 aa6.48□□□□□ -1.37
CHMP6-202ENST00000571457 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
CHMP6-202ENST00000571457 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
CHMP6-202ENST00000571457 Q8IZM0 81 aa6.48□□□□□ -1.37
CHMP6-202ENST00000571457 OSTCQ9NRP0 149 aa6.48□□□□□ -1.37
CHMP6-202ENST00000571457 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
CHMP6-202ENST00000571457 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
CHMP6-202ENST00000571457 CEBPGP53567 150 aa6.47□□□□□ -1.37
CHMP6-202ENST00000571457 SPAG11AQ6PDA7 123 aa6.47□□□□□ -1.37
CHMP6-202ENST00000571457 TEX43Q6ZNM6 134 aa6.47□□□□□ -1.37
CHMP6-202ENST00000571457 LINC01551Q86U37 167 aa6.47□□□□□ -1.37
CHMP6-202ENST00000571457 TMEM141Q96I45 108 aa6.47□□□□□ -1.37
CHMP6-202ENST00000571457 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
CHMP6-202ENST00000571457 ALKBH7Q9BT30 221 aaPredicted RBP6.47□□□□□ -1.37
CHMP6-202ENST00000571457 F8VRH5 84 aa6.46□□□□□ -1.38
CHMP6-202ENST00000571457 RAB5AP20339 215 aa6.46□□□□□ -1.38
CHMP6-202ENST00000571457 SMIM7Q9BQ49 75 aa6.46□□□□□ -1.38
CHMP6-202ENST00000571457 NAT8BQ9UHF3 227 aa6.46□□□□□ -1.38
CHMP6-202ENST00000571457 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
CHMP6-202ENST00000571457 A0A1B0GW15 77 aa6.45□□□□□ -1.38
CHMP6-202ENST00000571457 GAGE10A6NGK3 116 aa6.45□□□□□ -1.38
CHMP6-202ENST00000571457 RGS21Q2M5E4 152 aa6.45□□□□□ -1.38
CHMP6-202ENST00000571457 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms