RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 C2orf16Q68DN1 1984 aa4.51□□□□□ -1.69
KARS-211ENST00000569298 IGHV3-64A0A075B6Q5 118 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 TRBV10-1A0A0K0K1A3 114 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 A0A1B0GW54 56 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 M0QY20 66 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 CCL24O00175 119 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 SLPIP03973 132 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 NDPQ00604 133 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 C10orf55Q5SWW7 151 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 Q8N9P0 234 aaPredicted RBP4.5□□□□□ -1.69
KARS-211ENST00000569298 USF3Q68DE3 2245 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 SPAG17Q6Q759 2223 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 UNC13CQ8NB66 2214 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 DSPP15924 2871 aaKnown RBP4.5□□□□□ -1.69
KARS-211ENST00000569298 CHD6Q8TD26 2715 aa4.5□□□□□ -1.69
KARS-211ENST00000569298 TET2Q6N021 2002 aaPredicted RBP4.5□□□□□ -1.69
KARS-211ENST00000569298 PRR3P79522 188 aaKnown RBP4.49□□□□□ -1.69
KARS-211ENST00000569298 HAMPP81172 84 aa4.49□□□□□ -1.69
KARS-211ENST00000569298 RPL36AP83881 106 aaKnown RBP4.49□□□□□ -1.69
KARS-211ENST00000569298 Q8N814 137 aa4.49□□□□□ -1.69
KARS-211ENST00000569298 PATE1Q8WXA2 126 aa4.49□□□□□ -1.69
KARS-211ENST00000569298 RPL36ALQ969Q0 106 aaKnown RBP4.49□□□□□ -1.69
KARS-211ENST00000569298 NBEAQ8NFP9 2946 aa4.49□□□□□ -1.69
KARS-211ENST00000569298 DMXL2Q8TDJ6 3036 aa4.49□□□□□ -1.69
KARS-211ENST00000569298 SPEGQ15772 3267 aa4.49□□□□□ -1.69
KARS-211ENST00000569298 GON4LQ3T8J9 2241 aa4.49□□□□□ -1.69
KARS-211ENST00000569298 LAMA5O15230 3695 aa4.49□□□□□ -1.69
KARS-211ENST00000569298 IGHV1OR15-1A0A075B7D0 117 aa4.48□□□□□ -1.69
KARS-211ENST00000569298 IGHV1-3A0A0C4DH29 117 aa4.48□□□□□ -1.69
KARS-211ENST00000569298 IGHV4-38-2P0DP08 117 aa4.48□□□□□ -1.69
KARS-211ENST00000569298 RNASE3P12724 160 aaKnown RBP4.48□□□□□ -1.69
KARS-211ENST00000569298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.48□□□□□ -1.69
KARS-211ENST00000569298 SPTSSBQ8NFR3 76 aa4.48□□□□□ -1.69
KARS-211ENST00000569298 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
KARS-211ENST00000569298 ZNF580Q9UK33 172 aa4.48□□□□□ -1.69
KARS-211ENST00000569298 DSCAMO60469 2012 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 IGKV2-28A0A075B6P5 120 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 IGHV3-38A0A0C4DH36 116 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 SPTY2D1-AS1A0A0U1RR47 76 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 K7EQG2 157 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 IGKV2D-28P01615 120 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 FBXL19-AS1Q494R0 122 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 NTM-AS1Q6ZSK4 140 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 ZFAND2AQ8N6M9 145 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 LEAP2Q969E1 77 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 SND1-IT1Q9HBX3 110 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 CELA1Q9UNI1 258 aa4.47□□□□□ -1.69
KARS-211ENST00000569298 ANKRD11Q6UB99 2663 aaPredicted RBP4.47□□□□□ -1.69
KARS-211ENST00000569298 CNOT1A5YKK6 2376 aaKnown RBP4.46□□□□□ -1.7
KARS-211ENST00000569298 IGHV3-20A0A0C4DH32 117 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 PRAC2D3DTV9 90 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 H3BPC8 53 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 MOBPQ13875 183 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 Q6YL49 198 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 SCXQ7RTU7 201 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 NOTCH4Q99466 2003 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 LOC400499M0QZD8 3231 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 MED12Q93074 2177 aa4.46□□□□□ -1.7
KARS-211ENST00000569298 CACNA1BQ00975 2339 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 IGLV11-55A0A075B6I3 123 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 TRBV6-4A0A1B0GX49 114 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 A6NED7 52 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 CCL3P10147 92 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 CASC2Q6XLA1 102 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 C18orf65Q6ZTR6 163 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 ZNRF1Q8ND25 227 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 LINC00476Q8WZB0 136 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 HIGD2AQ9BW72 106 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 POLEQ07864 2286 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 NACAE9PAV3 2078 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 ITPR1Q14643 2758 aa4.45□□□□□ -1.7
KARS-211ENST00000569298 AKAP13Q12802 2813 aa4.44□□□□□ -1.7
KARS-211ENST00000569298 SDK1Q7Z5N4 2213 aa4.44□□□□□ -1.7
KARS-211ENST00000569298 CELSR3Q9NYQ7 3312 aa4.44□□□□□ -1.7
KARS-211ENST00000569298 KMT2BQ9UMN6 2715 aaPredicted RBP4.44□□□□□ -1.7
KARS-211ENST00000569298 IGLV3-9A0A075B6K5 115 aa4.44□□□□□ -1.7
KARS-211ENST00000569298 GAFA1Q96PS6 74 aa4.44□□□□□ -1.7
KARS-211ENST00000569298 CDKN2A-AS1Q9UH64 79 aa4.44□□□□□ -1.7
KARS-211ENST00000569298 USP24Q9UPU5 2620 aa4.44□□□□□ -1.7
KARS-211ENST00000569298 SMG1Q96Q15 3661 aaKnown RBP4.43□□□□□ -1.7
KARS-211ENST00000569298 IGHV3-49A0A0A0MS15 119 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 IGHV6-1A0A0B4J1U7 121 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 SMIM1B2RUZ4 78 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 IGKV3-15P01624 115 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 Q6ZTI0 123 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 B9D2Q9BPU9 175 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 DOCK7Q96N67 2140 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 CACNA1DQ01668 2161 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 IGF2RP11717 2491 aa4.43□□□□□ -1.7
KARS-211ENST00000569298 MAP1BP46821 2468 aaKnown RBP4.43□□□□□ -1.7
KARS-211ENST00000569298 ZFYVE26Q68DK2 2539 aa4.42□□□□□ -1.7
KARS-211ENST00000569298 KALRNO60229 2985 aa4.42□□□□□ -1.7
KARS-211ENST00000569298 ESPL1Q14674 2120 aa4.42□□□□□ -1.7
KARS-211ENST00000569298 IGHV3-21A0A0B4J1V1 117 aa4.42□□□□□ -1.7
KARS-211ENST00000569298 IGKV4-1P06312 121 aa4.42□□□□□ -1.7
KARS-211ENST00000569298 CNBPP62633 177 aaKnown RBP4.42□□□□□ -1.7
KARS-211ENST00000569298 NPBQ8NG41 125 aa4.42□□□□□ -1.7
KARS-211ENST00000569298 ARRDC1-AS1Q9H2J1 176 aa4.42□□□□□ -1.7
KARS-211ENST00000569298 PLAC8Q9NZF1 115 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms