RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 C5orf56Q8N8D9 126 aa4.48□□□□□ -1.69
CNOT1-211ENST00000567188 PRRC2AP48634 2157 aaKnown RBP4.47□□□□□ -1.69
CNOT1-211ENST00000567188 IBA57-AS1B1ANH7 110 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 SPRY2O43597 315 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 EDN2P20800 178 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 HHLA3Q9XRX5 114 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 E7EUB6 86 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 FAM229AH3BQW9 127 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 IGKV1-17P01599 117 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 RPL28P46779 137 aaKnown RBP4.47□□□□□ -1.69
CNOT1-211ENST00000567188 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 IGHV4-4A0A075B6R2 117 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 TRBV6-5A0A0K0K1A5 114 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 LMO4P61968 165 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 LINC00474Q9P2X8 69 aa4.47□□□□□ -1.69
CNOT1-211ENST00000567188 COX7BP24311 80 aa4.46□□□□□ -1.69
CNOT1-211ENST00000567188 Q6ZPA2 131 aa4.46□□□□□ -1.69
CNOT1-211ENST00000567188 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.69
CNOT1-211ENST00000567188 Q6YL49 198 aa4.46□□□□□ -1.69
CNOT1-211ENST00000567188 KLK9Q9UKQ9 250 aa4.46□□□□□ -1.69
CNOT1-211ENST00000567188 TRBV10-1A0A0K0K1A3 114 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 MSRB1Q9NZV6 116 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 SPINK13Q1W4C9 94 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 Q8N6K4 173 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 LAMA1P25391 3075 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 ERC2-IT1O76042 136 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 IGLV1-47P01700 117 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 RPL39LQ96EH5 51 aaKnown RBP4.46□□□□□ -1.7
CNOT1-211ENST00000567188 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 WFDC10AQ9H1F0 79 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-211ENST00000567188 URB1-AS1Q96HZ7 61 aa4.46□□□□□ -1.7
CNOT1-211ENST00000567188 IGHV3-16A0A0C4DH30 117 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 X6R8D5 127 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 CSPG4Q6UVK1 2322 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 KIAA0087Q14695 138 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 SOSTDC1Q6X4U4 206 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 IGHV7-81A0A0B4J1V7 117 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 SPAG11BQ08648 103 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 DEFB4AO15263 64 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 NOP10Q9NPE3 64 aaKnown RBP4.45□□□□□ -1.7
CNOT1-211ENST00000567188 CELA1Q9UNI1 258 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 ATRXP46100 2492 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 COX6B2Q6YFQ2 88 aa4.45□□□□□ -1.7
CNOT1-211ENST00000567188 MIR7-3HGQ8N6C7 128 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 CNFNQ9BYD5 112 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 hDV103S1A0JD37 113 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 DEFB1P60022 68 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 GPR179Q6PRD1 2367 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 SMG1Q96Q15 3661 aaKnown RBP4.44□□□□□ -1.7
CNOT1-211ENST00000567188 K7EQD1 137 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 SORL1Q92673 2214 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 LAMA5O15230 3695 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 PTPRQQ9UMZ3 2332 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 A6NDX4 124 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 LINC01546A6NGU7 62 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 PSMG3-AS1Q96PY0 264 aa4.44□□□□□ -1.7
CNOT1-211ENST00000567188 A8MZ25 164 aa4.43□□□□□ -1.7
CNOT1-211ENST00000567188 HIGD2AQ9BW72 106 aa4.43□□□□□ -1.7
CNOT1-211ENST00000567188 MUC3AQ02505 3323 aa4.43□□□□□ -1.7
CNOT1-211ENST00000567188 MUC6Q6W4X9 2439 aa4.43□□□□□ -1.7
CNOT1-211ENST00000567188 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
CNOT1-211ENST00000567188 RPL39P62891 51 aaKnown RBP4.43□□□□□ -1.7
CNOT1-211ENST00000567188 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
CNOT1-211ENST00000567188 LCA10Q71F78 164 aa4.43□□□□□ -1.7
CNOT1-211ENST00000567188 FAM19A1Q7Z5A9 133 aa4.43□□□□□ -1.7
CNOT1-211ENST00000567188 TRAV10A0A0B4J240 114 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 C4orf3Q8WVX3 66 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 FAM208BQ5VWN6 2430 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 M0R2N4 97 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 ODF3BA8MYP8 253 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 H3BPC8 53 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 NHLRC4P0CG21 123 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-211ENST00000567188 Q8N9L7 120 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 ZNF702PQ9H963 129 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 A0A1B0GW54 56 aa4.42□□□□□ -1.7
CNOT1-211ENST00000567188 SMCPP49901 116 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-211ENST00000567188 SPINK6Q6UWN8 80 aa4.41□□□□□ -1.7
CNOT1-211ENST00000567188 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-211ENST00000567188 A0A087WVE0 104 aa4.41□□□□□ -1.7
CNOT1-211ENST00000567188 IGKV2-29A2NJV5 120 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-211ENST00000567188 PRR15Q8IV56 129 aa4.41□□□□□ -1.7
CNOT1-211ENST00000567188 LINC00269Q8N2A0 174 aa4.41□□□□□ -1.7
CNOT1-211ENST00000567188 PRM2P04554 102 aa4.41□□□□□ -1.7
CNOT1-211ENST00000567188 IGLV4-3A0A075B6K6 122 aa4.41□□□□□ -1.7
CNOT1-211ENST00000567188 ACACBO00763 2458 aa4.41□□□□□ -1.7
CNOT1-211ENST00000567188 DEFB131BA0A096LNP1 70 aa4.41□□□□□ -1.7
CNOT1-211ENST00000567188 IGF1P05019 195 aa4.4□□□□□ -1.7
CNOT1-211ENST00000567188 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.7
CNOT1-211ENST00000567188 ATP11AUNQ6ZP68 121 aa4.4□□□□□ -1.7
CNOT1-211ENST00000567188 NTM-AS1Q6ZSK4 140 aa4.4□□□□□ -1.7
CNOT1-211ENST00000567188 REG3GQ6UW15 175 aa4.4□□□□□ -1.7
CNOT1-211ENST00000567188 GNRH2O43555 120 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 COX8CQ7Z4L0 72 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 OTOGLQ3ZCN5 2332 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 IGKV1D-37A0A075B6S9 117 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 FHL2Q14192 279 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 DEFB135Q30KP9 77 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 C7orf65Q6ZTY9 151 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms