RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ZNF702PQ9H963 129 aa11.18□□□□□ -0.62
COMMD4-215ENST00000566843 SMIM9A6NGZ8 99 aa11.17□□□□□ -0.62
COMMD4-215ENST00000566843 TRBV10-1A0A0K0K1A3 114 aa11.16□□□□□ -0.62
COMMD4-215ENST00000566843 COX7CP15954 63 aa11.16□□□□□ -0.62
COMMD4-215ENST00000566843 C2orf48Q96LS8 159 aa11.16□□□□□ -0.62
COMMD4-215ENST00000566843 OVOL2Q9BRP0 275 aa11.16□□□□□ -0.62
COMMD4-215ENST00000566843 CELSR1Q9NYQ6 3014 aa11.16□□□□□ -0.62
COMMD4-215ENST00000566843 Q96MF0 132 aa11.16□□□□□ -0.62
COMMD4-215ENST00000566843 ANKRD17O75179 2603 aaKnown RBP11.16□□□□□ -0.62
COMMD4-215ENST00000566843 RPL36AP83881 106 aaKnown RBP11.15□□□□□ -0.62
COMMD4-215ENST00000566843 GAGE2AQ6NT46 116 aa11.15□□□□□ -0.62
COMMD4-215ENST00000566843 RPL36ALQ969Q0 106 aaKnown RBP11.15□□□□□ -0.62
COMMD4-215ENST00000566843 NAV2Q8IVL1 2488 aa11.15□□□□□ -0.62
COMMD4-215ENST00000566843 APCP25054 2843 aa11.15□□□□□ -0.62
COMMD4-215ENST00000566843 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
COMMD4-215ENST00000566843 CRPP02741 224 aa11.14□□□□□ -0.63
COMMD4-215ENST00000566843 Q9HAA7 133 aa11.14□□□□□ -0.63
COMMD4-215ENST00000566843 K7EQD1 137 aa11.14□□□□□ -0.63
COMMD4-215ENST00000566843 DEFB113Q30KQ7 82 aa11.14□□□□□ -0.63
COMMD4-215ENST00000566843 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
COMMD4-215ENST00000566843 LINC00337Q8N6G1 96 aa11.14□□□□□ -0.63
COMMD4-215ENST00000566843 IGKV2-28A0A075B6P5 120 aa11.13□□□□□ -0.63
COMMD4-215ENST00000566843 IGKV2D-28P01615 120 aa11.13□□□□□ -0.63
COMMD4-215ENST00000566843 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
COMMD4-215ENST00000566843 OBSCN-AS1Q96MR7 158 aa11.13□□□□□ -0.63
COMMD4-215ENST00000566843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.13□□□□□ -0.631e-8■■■■□ 24.7
COMMD4-215ENST00000566843 ATOX1O00244 68 aa11.12□□□□□ -0.63
COMMD4-215ENST00000566843 CRYGAP11844 174 aa11.12□□□□□ -0.63
COMMD4-215ENST00000566843 DEFB136Q30KP8 78 aa11.12□□□□□ -0.63
COMMD4-215ENST00000566843 LRRC75A-AS1Q8N1F1 130 aa11.12□□□□□ -0.63
COMMD4-215ENST00000566843 LINC01356Q8N9X3 169 aa11.11□□□□□ -0.63
COMMD4-215ENST00000566843 A0A1B0GX51 115 aa11.11□□□□□ -0.63
COMMD4-215ENST00000566843 J3QLI3 93 aa11.11□□□□□ -0.63
COMMD4-215ENST00000566843 DSCR9P59020 149 aa11.11□□□□□ -0.63
COMMD4-215ENST00000566843 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
COMMD4-215ENST00000566843 MIR7-3HGQ8N6C7 128 aa11.11□□□□□ -0.63
COMMD4-215ENST00000566843 TRGV1A0A0A0MS02 117 aa11.1□□□□□ -0.63
COMMD4-215ENST00000566843 COX7B2Q8TF08 81 aa11.1□□□□□ -0.63
COMMD4-215ENST00000566843 SND1-IT1Q9HBX3 110 aa11.1□□□□□ -0.63
COMMD4-215ENST00000566843 A0A087WYN8 130 aa11.1□□□□□ -0.63
COMMD4-215ENST00000566843 H0YGX0 51 aa11.1□□□□□ -0.63
COMMD4-215ENST00000566843 DEFB114Q30KQ6 69 aa11.1□□□□□ -0.63
COMMD4-215ENST00000566843 Q6YL49 198 aa11.1□□□□□ -0.63
COMMD4-215ENST00000566843 SMIM11BQ8TCY0 68 aa11.1□□□□□ -0.63
COMMD4-215ENST00000566843 CSPG4Q6UVK1 2322 aa11.09□□□□□ -0.63
COMMD4-215ENST00000566843 Q6JHZ5 121 aa11.09□□□□□ -0.63
COMMD4-215ENST00000566843 XCL2Q9UBD3 114 aa11.09□□□□□ -0.63
COMMD4-215ENST00000566843 J3KT08 172 aa11.09□□□□□ -0.63
COMMD4-215ENST00000566843 DNAL4O96015 105 aa11.08□□□□□ -0.64
COMMD4-215ENST00000566843 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
COMMD4-215ENST00000566843 DYNLRB2Q8TF09 96 aa11.08□□□□□ -0.64
COMMD4-215ENST00000566843 TMEM243Q9BU79 118 aa11.08□□□□□ -0.64
COMMD4-215ENST00000566843 HECTD1Q9ULT8 2610 aa11.08□□□□□ -0.64
COMMD4-215ENST00000566843 A0A096LNT2 108 aa11.07□□□□□ -0.64
COMMD4-215ENST00000566843 FSHBP01225 129 aa11.07□□□□□ -0.64
COMMD4-215ENST00000566843 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
COMMD4-215ENST00000566843 KLK5Q9Y337 293 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-215ENST00000566843 LOC107984640A0A0U1RRK4 108 aa11.07□□□□□ -0.64
COMMD4-215ENST00000566843 FAM19A5Q7Z5A7 132 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-215ENST00000566843 Q6ZTI0 123 aa11.06□□□□□ -0.64
COMMD4-215ENST00000566843 OR13C6PQ8NH95 151 aa11.06□□□□□ -0.64
COMMD4-215ENST00000566843 C4orf3Q8WVX3 66 aa11.06□□□□□ -0.64
COMMD4-215ENST00000566843 UBE2L6O14933 153 aa11.06□□□□□ -0.64
COMMD4-215ENST00000566843 CCL18P55774 89 aa11.06□□□□□ -0.64
COMMD4-215ENST00000566843 ODF3L2Q3SX64 289 aa11.06□□□□□ -0.64
COMMD4-215ENST00000566843 KRTAP1-3Q8IUG1 177 aa11.06□□□□□ -0.64
COMMD4-215ENST00000566843 C14orf132Q9NPU4 83 aa11.06□□□□□ -0.64
COMMD4-215ENST00000566843 ZNF469Q96JG9 3925 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-215ENST00000566843 RPS28P62857 69 aaKnown RBP11.05□□□□□ -0.64
COMMD4-215ENST00000566843 UNC79Q9P2D8 2635 aa11.05□□□□□ -0.64
COMMD4-215ENST00000566843 CCDC168Q8NDH2 2452 aa11.04□□□□□ -0.64
COMMD4-215ENST00000566843 LINC00846Q9NV44 126 aa11.04□□□□□ -0.64
COMMD4-215ENST00000566843 CREBBPQ92793 2442 aa11.04□□□□□ -0.64
COMMD4-215ENST00000566843 IBA57-AS1B1ANH7 110 aa11.04□□□□□ -0.64
COMMD4-215ENST00000566843 LINC00158P58513 81 aa11.04□□□□□ -0.64
COMMD4-215ENST00000566843 WFDC11Q8NEX6 87 aa11.04□□□□□ -0.64
COMMD4-215ENST00000566843 ITPR2Q14571 2701 aa11.03□□□□□ -0.64
COMMD4-215ENST00000566843 ZANQ9Y493 2812 aa11.03□□□□□ -0.64
COMMD4-215ENST00000566843 STHQ8IWL8 128 aa11.02□□□□□ -0.64
COMMD4-215ENST00000566843 hADV29S1A0JD25 119 aa11.02□□□□□ -0.65
COMMD4-215ENST00000566843 PDZD2O15018 2839 aa11.02□□□□□ -0.65
COMMD4-215ENST00000566843 IGHV3OR16-9A0A0B4J2B5 98 aa11.01□□□□□ -0.65
COMMD4-215ENST00000566843 IGKV3D-7A0A0C4DH55 119 aa11.01□□□□□ -0.65
COMMD4-215ENST00000566843 LECT2O14960 151 aa11.01□□□□□ -0.65
COMMD4-215ENST00000566843 TOMM7Q9P0U1 55 aa11.01□□□□□ -0.65
COMMD4-215ENST00000566843 SERP2Q8N6R1 65 aa11.01□□□□□ -0.65
COMMD4-215ENST00000566843 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
COMMD4-215ENST00000566843 LY6G6DO95868 133 aa11□□□□□ -0.65
COMMD4-215ENST00000566843 IGHV4-31P0DP07 118 aa11□□□□□ -0.65
COMMD4-215ENST00000566843 LINC01561Q8N1V8 128 aa10.99□□□□□ -0.65
COMMD4-215ENST00000566843 CYSTM1Q9H1C7 97 aa10.99□□□□□ -0.65
COMMD4-215ENST00000566843 A0A087WZ39 114 aa10.98□□□□□ -0.65
COMMD4-215ENST00000566843 TRBV6-4A0A1B0GX49 114 aa10.98□□□□□ -0.65
COMMD4-215ENST00000566843 LINC00167Q96N53 147 aa10.98□□□□□ -0.65
COMMD4-215ENST00000566843 CR1P17927 2039 aa10.98□□□□□ -0.65
COMMD4-215ENST00000566843 NCR3O14931 201 aa10.98□□□□□ -0.65
COMMD4-215ENST00000566843 NOP10Q9NPE3 64 aaKnown RBP10.98□□□□□ -0.65
COMMD4-215ENST00000566843 TMEM258P61165 79 aa10.97□□□□□ -0.65
COMMD4-215ENST00000566843 SS18Q15532 418 aa10.97□□□□□ -0.65
COMMD4-215ENST00000566843 IGLV4-60A0A075B6I1 120 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms