RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 C2orf48Q96LS8 159 aa9.14□□□□□ -0.95
FANCA-220ENST00000566409 CAMK2N2Q96S95 79 aa9.14□□□□□ -0.95
FANCA-220ENST00000566409 LINC00474Q9P2X8 69 aa9.14□□□□□ -0.95
FANCA-220ENST00000566409 LOC107984640A0A0U1RRK4 108 aa9.13□□□□□ -0.95
FANCA-220ENST00000566409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.13□□□□□ -0.95
FANCA-220ENST00000566409 ADCYAP1P18509 176 aa9.13□□□□□ -0.95
FANCA-220ENST00000566409 RAB5AP20339 215 aa9.13□□□□□ -0.95
FANCA-220ENST00000566409 IFITM2Q01629 132 aa9.13□□□□□ -0.95
FANCA-220ENST00000566409 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 A0A0J9YXV3 536 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 IFITM10A6NMD0 228 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 APOMO95445 188 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 SPAG11BQ08648 103 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 GAGE2BQ13066 116 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 SERTAD4-AS1Q5TG53 156 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 PKIGQ9Y2B9 76 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 LAMTOR2Q9Y2Q5 125 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
FANCA-220ENST00000566409 OR10D4PQ8NGN7 298 aa9.11□□□□□ -0.95
FANCA-220ENST00000566409 IFI27P40305 119 aaPredicted RBP9.1□□□□□ -0.95
FANCA-220ENST00000566409 LINC00242Q5T6M2 205 aa9.1□□□□□ -0.95
FANCA-220ENST00000566409 C10orf25Q5T742 122 aa9.1□□□□□ -0.95
FANCA-220ENST00000566409 ZC2HC1BQ5TFG8 222 aa9.1□□□□□ -0.95
FANCA-220ENST00000566409 Q8N8P6 123 aa9.1□□□□□ -0.95
FANCA-220ENST00000566409 ORAOV1Q8WV07 137 aa9.1□□□□□ -0.95
FANCA-220ENST00000566409 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
FANCA-220ENST00000566409 RNF151Q2KHN1 245 aa9.09□□□□□ -0.95
FANCA-220ENST00000566409 A0A087WZ39 114 aa9.08□□□□□ -0.96
FANCA-220ENST00000566409 TMEM218A2RU14 115 aa9.08□□□□□ -0.96
FANCA-220ENST00000566409 KIAA0087Q14695 138 aa9.08□□□□□ -0.96
FANCA-220ENST00000566409 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
FANCA-220ENST00000566409 LINC00173Q6ZV60 143 aa9.08□□□□□ -0.96
FANCA-220ENST00000566409 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
FANCA-220ENST00000566409 IMMP2LQ96T52 175 aa9.08□□□□□ -0.96
FANCA-220ENST00000566409 MRPL35Q9NZE8 188 aaKnown RBP9.08□□□□□ -0.96
FANCA-220ENST00000566409 UBE2D1P51668 147 aa9.07□□□□□ -0.96
FANCA-220ENST00000566409 RPL18AQ02543 176 aaKnown RBP9.07□□□□□ -0.96
FANCA-220ENST00000566409 C2orf66Q6UXQ4 117 aa9.07□□□□□ -0.96
FANCA-220ENST00000566409 TGIF2-C20orf24A0A0A6YYL0 155 aa9.06□□□□□ -0.96
FANCA-220ENST00000566409 SRSF9Q13242 221 aaKnown RBP eCLIP9.06□□□□□ -0.965e-8■■■■□ 26
FANCA-220ENST00000566409 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
FANCA-220ENST00000566409 UQCC3Q6UW78 93 aa9.06□□□□□ -0.96
FANCA-220ENST00000566409 AMELXQ99217 191 aa9.06□□□□□ -0.96
FANCA-220ENST00000566409 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
FANCA-220ENST00000566409 CYSLTR1Q9Y271 337 aa9.06□□□□□ -0.96
FANCA-220ENST00000566409 IGIPA6NJ69 53 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 F8WDY8 70 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 NDUFA1O15239 70 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 KIAA1644Q3SXP7 199 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 ORMDL2Q53FV1 153 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 TEX43Q6ZNM6 134 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 Q6ZRP5 223 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 CTDSP1Q9GZU7 261 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 UBR4Q5T4S7 5183 aa9.05□□□□□ -0.96
FANCA-220ENST00000566409 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
FANCA-220ENST00000566409 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
FANCA-220ENST00000566409 K7EMI3 77 aa9.03□□□□□ -0.96
FANCA-220ENST00000566409 TLX1NBP0CAT3 122 aa9.03□□□□□ -0.96
FANCA-220ENST00000566409 SPINK6Q6UWN8 80 aa9.03□□□□□ -0.96
FANCA-220ENST00000566409 C2orf82Q6UX34 121 aa9.03□□□□□ -0.96
FANCA-220ENST00000566409 PHF5AQ7RTV0 110 aaKnown RBP9.03□□□□□ -0.96
FANCA-220ENST00000566409 NXT2Q9NPJ8 142 aaKnown RBP9.03□□□□□ -0.96
FANCA-220ENST00000566409 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
FANCA-220ENST00000566409 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.97
FANCA-220ENST00000566409 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
FANCA-220ENST00000566409 SEC11CQ9BY50 192 aa9.02□□□□□ -0.97
FANCA-220ENST00000566409 VCX2Q9H322 139 aa9.02□□□□□ -0.97
FANCA-220ENST00000566409 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.97
FANCA-220ENST00000566409 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
FANCA-220ENST00000566409 NPSP0C0P6 89 aa9.01□□□□□ -0.97
FANCA-220ENST00000566409 ODF1Q14990 250 aa9.01□□□□□ -0.97
FANCA-220ENST00000566409 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
FANCA-220ENST00000566409 LINC01561Q8N1V8 128 aa9.01□□□□□ -0.97
FANCA-220ENST00000566409 C2orf88Q9BSF0 95 aa9.01□□□□□ -0.97
FANCA-220ENST00000566409 KRTAP10-8P60410 259 aa9□□□□□ -0.97
FANCA-220ENST00000566409 Q6ZN92 141 aa9□□□□□ -0.97
FANCA-220ENST00000566409 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
FANCA-220ENST00000566409 C10orf91Q5T1B1 145 aa8.99□□□□□ -0.97
FANCA-220ENST00000566409 COMMD7Q86VX2 200 aa8.99□□□□□ -0.97
FANCA-220ENST00000566409 TOMM6Q96B49 74 aa8.99□□□□□ -0.97
FANCA-220ENST00000566409 GNB1LQ9BYB4 327 aa8.99□□□□□ -0.97
FANCA-220ENST00000566409 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
FANCA-220ENST00000566409 TRBV30A0A0K0K1B3 111 aa8.98□□□□□ -0.97
FANCA-220ENST00000566409 TIMM17AQ99595 171 aa8.98□□□□□ -0.97
FANCA-220ENST00000566409 ALKBH7Q9BT30 221 aaPredicted RBP8.98□□□□□ -0.97
FANCA-220ENST00000566409 LINC01546A6NGU7 62 aa8.97□□□□□ -0.97
FANCA-220ENST00000566409 MT-ND6P03923 174 aa8.97□□□□□ -0.97
FANCA-220ENST00000566409 CDKN2A-AS1Q9UH64 79 aa8.97□□□□□ -0.97
FANCA-220ENST00000566409 NDUFC2-KCTD14E9PQ53 114 aa8.96□□□□□ -0.98
FANCA-220ENST00000566409 C1orf137Q5JT78 98 aa8.96□□□□□ -0.98
FANCA-220ENST00000566409 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.98
FANCA-220ENST00000566409 REG3GQ6UW15 175 aa8.96□□□□□ -0.98
FANCA-220ENST00000566409 ERASQ7Z444 233 aa8.96□□□□□ -0.98
FANCA-220ENST00000566409 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.98
FANCA-220ENST00000566409 S100PP25815 95 aa8.95□□□□□ -0.98
FANCA-220ENST00000566409 G0S2P27469 103 aa8.95□□□□□ -0.98
FANCA-220ENST00000566409 SCGB3A1Q96QR1 104 aa8.95□□□□□ -0.98
FANCA-220ENST00000566409 TOMM7Q9P0U1 55 aa8.95□□□□□ -0.98
FANCA-220ENST00000566409 HERVK_113P63121 156 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms