RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ALKBH7Q9BT30 221 aaPredicted RBP8.47□□□□□ -1.05
COMMD4-214ENST00000566230 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
COMMD4-214ENST00000566230 A0A087WYN8 130 aa8.46□□□□□ -1.06
COMMD4-214ENST00000566230 SLPIP03973 132 aa8.46□□□□□ -1.06
COMMD4-214ENST00000566230 CHTF8P0CG12 524 aa8.46□□□□□ -1.06
COMMD4-214ENST00000566230 CNBPP62633 177 aaKnown RBP8.46□□□□□ -1.06
COMMD4-214ENST00000566230 FOXI1Q12951 378 aa8.46□□□□□ -1.06
COMMD4-214ENST00000566230 PRSS3P2Q8NHM4 247 aa8.46□□□□□ -1.06
COMMD4-214ENST00000566230 AP5S1Q9NUS5 200 aa8.46□□□□□ -1.06
COMMD4-214ENST00000566230 TGIF2-C20orf24A0A0A6YYL0 155 aa8.45□□□□□ -1.06
COMMD4-214ENST00000566230 hDV102S1A0JD36 115 aa8.45□□□□□ -1.06
COMMD4-214ENST00000566230 NPSP0C0P6 89 aa8.45□□□□□ -1.06
COMMD4-214ENST00000566230 XCL1P47992 114 aa8.45□□□□□ -1.06
COMMD4-214ENST00000566230 CYSLTR1Q9Y271 337 aa8.45□□□□□ -1.06
COMMD4-214ENST00000566230 TRAPPC1Q9Y5R8 145 aa8.45□□□□□ -1.06
COMMD4-214ENST00000566230 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
COMMD4-214ENST00000566230 C2orf66Q6UXQ4 117 aa8.44□□□□□ -1.06
COMMD4-214ENST00000566230 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
COMMD4-214ENST00000566230 FAM104AQ969W3 186 aa8.44□□□□□ -1.06
COMMD4-214ENST00000566230 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
COMMD4-214ENST00000566230 LINC01600Q96MT4 127 aa8.44□□□□□ -1.06
COMMD4-214ENST00000566230 IGHV3-64A0A075B6Q5 118 aa8.43□□□□□ -1.06
COMMD4-214ENST00000566230 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.43□□□□□ -1.06
COMMD4-214ENST00000566230 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
COMMD4-214ENST00000566230 LINC01546A6NGU7 62 aa8.43□□□□□ -1.06
COMMD4-214ENST00000566230 Q6ZUT4 128 aa8.43□□□□□ -1.06
COMMD4-214ENST00000566230 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
COMMD4-214ENST00000566230 SMCO4Q9NRQ5 59 aa8.43□□□□□ -1.06
COMMD4-214ENST00000566230 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
COMMD4-214ENST00000566230 IGHV1-58A0A0C4DH39 117 aa8.42□□□□□ -1.06
COMMD4-214ENST00000566230 RNASE13Q5GAN3 156 aaKnown RBP8.42□□□□□ -1.06
COMMD4-214ENST00000566230 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
COMMD4-214ENST00000566230 C15orf56Q8N910 161 aa8.42□□□□□ -1.06
COMMD4-214ENST00000566230 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
COMMD4-214ENST00000566230 GVQW2A0A096LPI5 108 aaPredicted RBP8.41□□□□□ -1.06
COMMD4-214ENST00000566230 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
COMMD4-214ENST00000566230 TOMM6Q96B49 74 aa8.41□□□□□ -1.06
COMMD4-214ENST00000566230 YPEL4Q96NS1 127 aa8.41□□□□□ -1.06
COMMD4-214ENST00000566230 VCX2Q9H322 139 aa8.41□□□□□ -1.06
COMMD4-214ENST00000566230 IGLV4-3A0A075B6K6 122 aa8.4□□□□□ -1.06
COMMD4-214ENST00000566230 COX7A2LO14548 114 aa8.4□□□□□ -1.06
COMMD4-214ENST00000566230 MALP21145 153 aa8.4□□□□□ -1.06
COMMD4-214ENST00000566230 Q6ZN92 141 aa8.4□□□□□ -1.06
COMMD4-214ENST00000566230 TEX43Q6ZNM6 134 aa8.4□□□□□ -1.06
COMMD4-214ENST00000566230 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 APOMO95445 188 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 FA2HQ7L5A8 372 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 ERASQ7Z444 233 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 AMELXQ99217 191 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
COMMD4-214ENST00000566230 IGHV3OR16-9A0A0B4J2B5 98 aa8.38□□□□□ -1.07
COMMD4-214ENST00000566230 A0A0J9YXV3 536 aa8.38□□□□□ -1.07
COMMD4-214ENST00000566230 LINC00614P0C842 121 aa8.38□□□□□ -1.07
COMMD4-214ENST00000566230 RAB5BP61020 215 aa8.38□□□□□ -1.07
COMMD4-214ENST00000566230 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
COMMD4-214ENST00000566230 C7orf33Q8WU49 177 aa8.38□□□□□ -1.07
COMMD4-214ENST00000566230 HIGD2BQ4VC39 106 aa8.37□□□□□ -1.07
COMMD4-214ENST00000566230 C5orf38Q86SI9 138 aa8.37□□□□□ -1.07
COMMD4-214ENST00000566230 C18orf32Q8TCD1 76 aa8.37□□□□□ -1.07
COMMD4-214ENST00000566230 SCGB3A1Q96QR1 104 aa8.37□□□□□ -1.07
COMMD4-214ENST00000566230 UBE2D1P51668 147 aa8.36□□□□□ -1.07
COMMD4-214ENST00000566230 SEC11AP67812 179 aa8.36□□□□□ -1.07
COMMD4-214ENST00000566230 COX6A2Q02221 97 aa8.36□□□□□ -1.07
COMMD4-214ENST00000566230 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
COMMD4-214ENST00000566230 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
COMMD4-214ENST00000566230 F8WDY8 70 aa8.35□□□□□ -1.07
COMMD4-214ENST00000566230 CBLN2Q8IUK8 224 aa8.35□□□□□ -1.07
COMMD4-214ENST00000566230 LINC01561Q8N1V8 128 aa8.35□□□□□ -1.07
COMMD4-214ENST00000566230 C2orf48Q96LS8 159 aa8.35□□□□□ -1.07
COMMD4-214ENST00000566230 PKIGQ9Y2B9 76 aa8.35□□□□□ -1.07
COMMD4-214ENST00000566230 A0A087WZ39 114 aa8.34□□□□□ -1.07
COMMD4-214ENST00000566230 SYCNQ0VAF6 134 aa8.34□□□□□ -1.07
COMMD4-214ENST00000566230 MAJINQ3KP22 176 aa8.34□□□□□ -1.07
COMMD4-214ENST00000566230 LINC00173Q6ZV60 143 aa8.34□□□□□ -1.07
COMMD4-214ENST00000566230 OR10D4PQ8NGN7 298 aa8.34□□□□□ -1.07
COMMD4-214ENST00000566230 IGLV4-69A0A075B6H9 119 aa8.33□□□□□ -1.08
COMMD4-214ENST00000566230 IGKV2-24A0A0C4DH68 120 aa8.33□□□□□ -1.08
COMMD4-214ENST00000566230 URB1-AS1Q96HZ7 61 aa8.33□□□□□ -1.08
COMMD4-214ENST00000566230 LPAP08519 4548 aa8.32□□□□□ -1.08
COMMD4-214ENST00000566230 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
COMMD4-214ENST00000566230 HERVK_113P63121 156 aa8.32□□□□□ -1.08
COMMD4-214ENST00000566230 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
COMMD4-214ENST00000566230 ZC2HC1BQ5TFG8 222 aa8.32□□□□□ -1.08
COMMD4-214ENST00000566230 STPG4Q8N801 248 aa8.32□□□□□ -1.08
COMMD4-214ENST00000566230 LINC00526Q96FQ7 95 aa8.32□□□□□ -1.08
COMMD4-214ENST00000566230 COLCA2A8K830 154 aa8.31□□□□□ -1.08
COMMD4-214ENST00000566230 PMVKQ15126 192 aa8.31□□□□□ -1.08
COMMD4-214ENST00000566230 RNF151Q2KHN1 245 aa8.31□□□□□ -1.08
COMMD4-214ENST00000566230 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
COMMD4-214ENST00000566230 ORAOV1Q8WV07 137 aa8.31□□□□□ -1.08
COMMD4-214ENST00000566230 CHCHD1Q96BP2 118 aaKnown RBP8.31□□□□□ -1.08
COMMD4-214ENST00000566230 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
COMMD4-214ENST00000566230 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
COMMD4-214ENST00000566230 CST9LQ9H4G1 147 aa8.31□□□□□ -1.08
COMMD4-214ENST00000566230 A0A096LNI7 61 aa8.3□□□□□ -1.08
COMMD4-214ENST00000566230 HBDP02042 147 aa8.3□□□□□ -1.08
COMMD4-214ENST00000566230 TRGC2P03986 189 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms