RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 IFT172Q9UG01 1749 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 LRRC7Q96NW7 1537 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 MDC1Q14676 2089 aaKnown RBP2.48□□□□□ -2.01
CHD9-214ENST00000565119 SHPRHQ149N8 1683 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 NHSQ6T4R5 1651 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 IGKV3OR2-268A0A0C4DH90 116 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 A0A0D9SFI3 127 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 LEPROTL1O95214 131 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 PPYP01298 95 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 RNASE3P12724 160 aaKnown RBP2.48□□□□□ -2.01
CHD9-214ENST00000565119 CCL18P55774 89 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 ZNF563Q8TA94 476 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 LINC01558Q9Y6Z2 57 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 PAPPAQ13219 1627 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 LOC285556D6RIA3 1793 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 MYO7BQ6PIF6 2116 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 ANKRD36A6QL64 1941 aa2.48□□□□□ -2.01
CHD9-214ENST00000565119 USP32Q8NFA0 1604 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 CICQ96RK0 1608 aaPredicted RBP2.47□□□□□ -2.01
CHD9-214ENST00000565119 ALKQ9UM73 1620 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 IGKV2D-24A0A075B6R9 120 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 TRBV6-5A0A0K0K1A5 114 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 SNRPGP15A8MWD9 76 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 D6R8Y8 96 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 HCP5Q6MZN7 132 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 MUSTN1Q8IVN3 82 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 R4GMQ9 66 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 ADGRB2O60241 1585 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 DIP2AQ14689 1571 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 CROCC2H7BZ55 1655 aa2.47□□□□□ -2.01
CHD9-214ENST00000565119 BRWD1Q9NSI6 2320 aa2.46□□□□□ -2.02
CHD9-214ENST00000565119 COL4A2P08572 1712 aa2.46□□□□□ -2.02
CHD9-214ENST00000565119 F8VRH5 84 aa2.46□□□□□ -2.02
CHD9-214ENST00000565119 C10orf55Q5SWW7 151 aa2.46□□□□□ -2.02
CHD9-214ENST00000565119 PRR15LQ9BU68 103 aa2.46□□□□□ -2.02
CHD9-214ENST00000565119 LINC00846Q9NV44 126 aa2.46□□□□□ -2.02
CHD9-214ENST00000565119 PLAC8Q9NZF1 115 aa2.46□□□□□ -2.02
CHD9-214ENST00000565119 WIZO95785 1651 aa2.46□□□□□ -2.02
CHD9-214ENST00000565119 ABCA4P78363 2273 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 COL4A1P02462 1669 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 RREB1Q92766 1687 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 FXYD6-FXYD2A0A087WZ82 144 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 TRBV7-4A0A0J9YYF1 115 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 BAGE3Q86Y29 109 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 BAGE2Q86Y30 109 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 PPP1R1CQ8WVI7 109 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 TTTY12Q9BZ98 90 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 MYO7AQ13402 2215 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 PARP4Q9UKK3 1724 aaKnown RBP2.45□□□□□ -2.02
CHD9-214ENST00000565119 ATP7BP35670 1465 aa2.45□□□□□ -2.02
CHD9-214ENST00000565119 PCDH15Q96QU1 1955 aa2.44□□□□□ -2.02
CHD9-214ENST00000565119 NBDYA0A0U1RRE5 68 aa2.44□□□□□ -2.02
CHD9-214ENST00000565119 SPINT3P49223 89 aa2.44□□□□□ -2.02
CHD9-214ENST00000565119 KLK9Q9UKQ9 250 aa2.44□□□□□ -2.02
CHD9-214ENST00000565119 NUP188Q5SRE5 1749 aa2.44□□□□□ -2.02
CHD9-214ENST00000565119 A0A087WTM6 91 aa2.43□□□□□ -2.02
CHD9-214ENST00000565119 IGKV2-40A0A087WW87 121 aaPredicted RBP2.43□□□□□ -2.02
CHD9-214ENST00000565119 LRCOL1A6NCL2 159 aa2.43□□□□□ -2.02
CHD9-214ENST00000565119 UQCR11O14957 56 aa2.43□□□□□ -2.02
CHD9-214ENST00000565119 DNAL4O96015 105 aa2.43□□□□□ -2.02
CHD9-214ENST00000565119 IGKV2D-40P01614 121 aaPredicted RBP2.43□□□□□ -2.02
CHD9-214ENST00000565119 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
CHD9-214ENST00000565119 COL14A1Q05707 1796 aaKnown RBP2.43□□□□□ -2.02
CHD9-214ENST00000565119 UBR3Q6ZT12 1888 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 H3BVH4 76 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 M0R135 149 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 M0R2N4 97 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 INE1O15225 51 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 IGLV3-19P01714 112 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 HMGA1P17096 107 aaKnown RBP2.42□□□□□ -2.02
CHD9-214ENST00000565119 ZNF137PP52743 207 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 LINC00315P59091 139 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 ATXN8Q156A1 80 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 SPRR4Q96PI1 79 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 WFDC6Q9BQY6 131 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 V9GYV3 84 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 PKD1L3Q7Z443 1732 aa2.42□□□□□ -2.02
CHD9-214ENST00000565119 VWDEQ8N2E2 1590 aa2.41□□□□□ -2.02
CHD9-214ENST00000565119 LOC110117498A0A087WWA1 95 aa2.41□□□□□ -2.02
CHD9-214ENST00000565119 IGLV6-57P01721 117 aa2.41□□□□□ -2.02
CHD9-214ENST00000565119 RPL37AP61513 92 aaKnown RBP2.41□□□□□ -2.02
CHD9-214ENST00000565119 FXYD3Q14802 87 aa2.41□□□□□ -2.02
CHD9-214ENST00000565119 FXYD6Q9H0Q3 95 aa2.41□□□□□ -2.02
CHD9-214ENST00000565119 WFDC10AQ9H1F0 79 aa2.41□□□□□ -2.02
CHD9-214ENST00000565119 GNG13Q9P2W3 67 aa2.41□□□□□ -2.02
CHD9-214ENST00000565119 ANKRD50Q9ULJ7 1429 aa2.41□□□□□ -2.02
CHD9-214ENST00000565119 ALPK2Q86TB3 2170 aa2.4□□□□□ -2.02
CHD9-214ENST00000565119 COL5A1P20908 1838 aaPredicted RBP2.4□□□□□ -2.02
CHD9-214ENST00000565119 TIAM2Q8IVF5 1701 aa2.4□□□□□ -2.02
CHD9-214ENST00000565119 KIAA0556O60303 1618 aa2.4□□□□□ -2.03
CHD9-214ENST00000565119 BIVM-ERCC5R4GMW8 1640 aa2.4□□□□□ -2.03
CHD9-214ENST00000565119 H3BRN7 92 aa2.4□□□□□ -2.03
CHD9-214ENST00000565119 MGPP08493 103 aa2.4□□□□□ -2.03
CHD9-214ENST00000565119 IL9P15248 144 aa2.4□□□□□ -2.03
CHD9-214ENST00000565119 LINC00322Q6ZN03 302 aaPredicted RBP2.4□□□□□ -2.03
CHD9-214ENST00000565119 C5orf56Q8N8D9 126 aa2.4□□□□□ -2.03
CHD9-214ENST00000565119 TMEM14CQ9P0S9 112 aa2.4□□□□□ -2.03
CHD9-214ENST00000565119 BCORQ6W2J9 1755 aa2.39□□□□□ -2.03
CHD9-214ENST00000565119 IGKV2-28A0A075B6P5 120 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms