RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 SRSF9Q13242 221 aaKnown RBP eCLIP5.23□□□□□ -1.57
MAP1LC3B-205ENST00000564638 RNF183Q96D59 192 aa5.23□□□□□ -1.57
MAP1LC3B-205ENST00000564638 SPANXB1Q9NS25 103 aaPredicted RBP5.23□□□□□ -1.57
MAP1LC3B-205ENST00000564638 NHP2Q9NX24 153 aaKnown RBP5.23□□□□□ -1.57
MAP1LC3B-205ENST00000564638 IGHV3-64A0A075B6Q5 118 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 IGHV4-28A0A0C4DH34 117 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 A0A0J9YY99 117 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 MIFP14174 115 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 UBE2D1P51668 147 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TIRAPP58753 221 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 HERVK_113P63121 156 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 UBE2V1Q13404 147 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 FAM222AQ5U5X8 452 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 NTM-AS1Q6ZSK4 140 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 RAB37Q96AX2 223 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
MAP1LC3B-205ENST00000564638 HUWE1Q7Z6Z7 4374 aaKnown RBP5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 IGLV5-45A0A087WSX0 123 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 IGHV1-58A0A0C4DH39 117 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 A0A0J9YWU9 116 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 TMEM238C9JI98 176 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 H3BUT2 72 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 K7ERJ3 54 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 IGHV3-30-3P0DP02 117 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 GYPEP15421 78 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 DAD1P61803 113 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 GTF2H5Q6ZYL4 71 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 FAM19A3Q7Z5A8 133 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 PRO0255Q9UI72 69 aa5.21□□□□□ -1.58
MAP1LC3B-205ENST00000564638 TRBV6-8A0A0A6YYG3 113 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 TEX48A0A1B0GUV7 120 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 K7EP13 123 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 DEFB4AO15263 64 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 SPINK8P0C7L1 97 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 FABP2P12104 132 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 C12orf74Q32Q52 190 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 ATP6V0E2Q8NHE4 81 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 VSIG2Q96IQ7 327 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 CHCHD5Q9BSY4 110 aa5.2□□□□□ -1.58
MAP1LC3B-205ENST00000564638 TRAV8-3A0A0A6YYJ7 113 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 TRAV13-1A0A0B4J241 112 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 A0A1B0GWB2 263 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 A0A1W2PPM0 123 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 GAGE10A6NGK3 116 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 K7EP34 96 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 CCL25O15444 150 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 PAX4O43316 350 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 ATP5G1P05496 136 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 GAGE6Q13070 117 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 LINC00242Q5T6M2 205 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 ZFAND6Q6FIF0 208 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 Q8NAQ8 132 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 NAA38Q9BRA0 125 aaKnown RBP5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 CDC42SE2Q9NRR3 84 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 CDKN2A-AS1Q9UH64 79 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 NDUFA12Q9UI09 145 aa5.19□□□□□ -1.58
MAP1LC3B-205ENST00000564638 A0A0J9YXY3 114 aa5.18□□□□□ -1.58
MAP1LC3B-205ENST00000564638 IGHV3-30P01768 117 aa5.18□□□□□ -1.58
MAP1LC3B-205ENST00000564638 SPART-AS1P0CW21 52 aa5.18□□□□□ -1.58
MAP1LC3B-205ENST00000564638 IGHV3-30-5P0DP03 117 aa5.18□□□□□ -1.58
MAP1LC3B-205ENST00000564638 C10orf126Q8N4M7 172 aa5.18□□□□□ -1.58
MAP1LC3B-205ENST00000564638 MUC7Q8TAX7 377 aa5.18□□□□□ -1.58
MAP1LC3B-205ENST00000564638 SPCS1Q9Y6A9 102 aa5.18□□□□□ -1.58
MAP1LC3B-205ENST00000564638 IGLV5-39A0A0G2JS06 123 aa5.17□□□□□ -1.58
MAP1LC3B-205ENST00000564638 IGLL5B9A064 214 aa5.17□□□□□ -1.58
MAP1LC3B-205ENST00000564638 NDUFA1O15239 70 aa5.17□□□□□ -1.58
MAP1LC3B-205ENST00000564638 RPL24P83731 157 aaKnown RBP5.17□□□□□ -1.58
MAP1LC3B-205ENST00000564638 C11orf68Q9H3H3 251 aaKnown RBP5.17□□□□□ -1.58
MAP1LC3B-205ENST00000564638 HERC1Q15751 4861 aa5.17□□□□□ -1.58
MAP1LC3B-205ENST00000564638 TRAV26-1A0A087WT03 109 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 SMIM1B2RUZ4 78 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 F5H768 121 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 TIMM17BO60830 172 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 COX6A2Q02221 97 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 LYRM7Q5U5X0 104 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 SH2D6Q7Z4S9 175 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 SPANXDQ9BXN6 97 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 SPANXCQ9NY87 97 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 CELA1Q9UNI1 258 aa5.16□□□□□ -1.58
MAP1LC3B-205ENST00000564638 IGKV3OR2-268A0A0C4DH90 116 aa5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 C3orf84H3BNL1 204 aa5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 APOMO95445 188 aa5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 HTN3P15516 51 aa5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 NANOS2P60321 138 aaKnown RBP5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 CIRBPQ14011 172 aaKnown RBP5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 MIAQ16674 131 aa5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 LCE2CQ5TA81 110 aa5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 C11orf45Q8TAV5 145 aa5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 ICOSQ9Y6W8 199 aa5.15□□□□□ -1.59
MAP1LC3B-205ENST00000564638 IGLV4-60A0A075B6I1 120 aa5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 A0A0B4J2C4 111 aa5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 A0A1B0GUV1 79 aa5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 A4D1N5 150 aa5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 IFITM1P13164 125 aa5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 HERV-K104P63124 156 aa5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 MRPL23Q16540 153 aaKnown RBP5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 MUSTN1Q8IVN3 82 aa5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 COPS9Q8WXC6 57 aa5.14□□□□□ -1.59
MAP1LC3B-205ENST00000564638 LITAFQ99732 161 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms