RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 JMJD1CQ15652 2540 aa14.17□□□□□ -0.14
MSLN-205ENST00000563941 FASNP49327 2511 aaKnown RBP14.17□□□□□ -0.14
MSLN-205ENST00000563941 ZNF625Q96I27 306 aaPredicted RBP14.17□□□□□ -0.14
MSLN-205ENST00000563941 NOTCH3Q9UM47 2321 aa14.16□□□□□ -0.14
MSLN-205ENST00000563941 MTORP42345 2549 aa14.16□□□□□ -0.14
MSLN-205ENST00000563941 NIPBLQ6KC79 2804 aaeCLIP14.16□□□□□ -0.14
MSLN-205ENST00000563941 CIDEAO60543 219 aa14.16□□□□□ -0.14
MSLN-205ENST00000563941 TRGV4A0A0C4DH28 118 aa14.15□□□□□ -0.14
MSLN-205ENST00000563941 F5H768 121 aa14.15□□□□□ -0.14
MSLN-205ENST00000563941 HECTD1Q9ULT8 2610 aa14.15□□□□□ -0.14
MSLN-205ENST00000563941 RPL13AP40429 203 aaKnown RBP14.15□□□□□ -0.14
MSLN-205ENST00000563941 LINC00308Q8TCZ7 52 aa14.15□□□□□ -0.14
MSLN-205ENST00000563941 COX6CP09669 75 aa14.14□□□□□ -0.15
MSLN-205ENST00000563941 A0A0U1RRA0 63 aa14.13□□□□□ -0.15
MSLN-205ENST00000563941 H7C423 109 aa14.12□□□□□ -0.15
MSLN-205ENST00000563941 PRIMA1Q86XR5 153 aa14.12□□□□□ -0.15
MSLN-205ENST00000563941 TRBV10-2A0A0K0K1G8 114 aa14.12□□□□□ -0.15
MSLN-205ENST00000563941 FHL2Q14192 279 aa14.11□□□□□ -0.15
MSLN-205ENST00000563941 LINC01600Q96MT4 127 aa14.11□□□□□ -0.15
MSLN-205ENST00000563941 MEIG1Q5JSS6 88 aa14.11□□□□□ -0.15
MSLN-205ENST00000563941 NTN5Q8WTR8 489 aaPredicted RBP14.11□□□□□ -0.15
MSLN-205ENST00000563941 CLEC2BQ92478 149 aa14.1□□□□□ -0.15
MSLN-205ENST00000563941 GAGE6Q13070 117 aa14.09□□□□□ -0.15
MSLN-205ENST00000563941 HERV-K104P63124 156 aa14.09□□□□□ -0.15
MSLN-205ENST00000563941 SOSTDC1Q6X4U4 206 aa14.09□□□□□ -0.15
MSLN-205ENST00000563941 KRTAP10-3P60369 221 aa14.08□□□□□ -0.16
MSLN-205ENST00000563941 COPS9Q8WXC6 57 aa14.08□□□□□ -0.16
MSLN-205ENST00000563941 SMR3AQ99954 134 aa14.08□□□□□ -0.16
MSLN-205ENST00000563941 XGP55808 180 aa14.08□□□□□ -0.16
MSLN-205ENST00000563941 C2CD3Q4AC94 2353 aa14.08□□□□□ -0.16
MSLN-205ENST00000563941 TRBV6-8A0A0A6YYG3 113 aa14.07□□□□□ -0.16
MSLN-205ENST00000563941 LST1O00453 97 aa14.06□□□□□ -0.16
MSLN-205ENST00000563941 PF4P02776 101 aa14.06□□□□□ -0.16
MSLN-205ENST00000563941 MT-ATP8P03928 68 aa14.06□□□□□ -0.16
MSLN-205ENST00000563941 C2orf82Q6UX34 121 aa14.06□□□□□ -0.16
MSLN-205ENST00000563941 NOTCH2Q04721 2471 aa14.06□□□□□ -0.16
MSLN-205ENST00000563941 IGLV4-60A0A075B6I1 120 aa14.05□□□□□ -0.16
MSLN-205ENST00000563941 TMEM262E9PQX1 116 aa14.05□□□□□ -0.16
MSLN-205ENST00000563941 IGKV3OR2-268A0A0C4DH90 116 aa14.05□□□□□ -0.16
MSLN-205ENST00000563941 CHCHD5Q9BSY4 110 aa14.05□□□□□ -0.16
MSLN-205ENST00000563941 DEFB130BP0DP73 79 aa14.04□□□□□ -0.16
MSLN-205ENST00000563941 DEFB130AP0DP74 79 aa14.04□□□□□ -0.16
MSLN-205ENST00000563941 LINC00482Q8N8I6 264 aa14.04□□□□□ -0.16
MSLN-205ENST00000563941 TEX49A0A1B0GTD5 131 aa14.03□□□□□ -0.16
MSLN-205ENST00000563941 H3BT86 120 aa14.03□□□□□ -0.16
MSLN-205ENST00000563941 CRLF1O75462 422 aa14.03□□□□□ -0.16
MSLN-205ENST00000563941 COX7B2Q8TF08 81 aa14.03□□□□□ -0.16
MSLN-205ENST00000563941 UBE2WQ96B02 151 aa14.03□□□□□ -0.16
MSLN-205ENST00000563941 KIR2DL5BQ8NHK3 375 aa14.02□□□□□ -0.16
MSLN-205ENST00000563941 HIVEP2P31629 2446 aa14.02□□□□□ -0.17
MSLN-205ENST00000563941 OTOGQ6ZRI0 2925 aa14.01□□□□□ -0.17
MSLN-205ENST00000563941 LINC00612Q8N6U2 182 aa14□□□□□ -0.17
MSLN-205ENST00000563941 PPDPFQ9H3Y8 114 aa14□□□□□ -0.17
MSLN-205ENST00000563941 TOMM7Q9P0U1 55 aa14□□□□□ -0.17
MSLN-205ENST00000563941 SHISA2Q6UWI4 295 aa13.99□□□□□ -0.17
MSLN-205ENST00000563941 IGHV3OR16-9A0A0B4J2B5 98 aa13.98□□□□□ -0.17
MSLN-205ENST00000563941 COX7A2LO14548 114 aa13.98□□□□□ -0.17
MSLN-205ENST00000563941 X6R8D5 127 aa13.97□□□□□ -0.17
MSLN-205ENST00000563941 GYPEP15421 78 aa13.97□□□□□ -0.17
MSLN-205ENST00000563941 TRAV8-4A0A0B4J246 113 aa13.96□□□□□ -0.18
MSLN-205ENST00000563941 LY6G6DO95868 133 aa13.96□□□□□ -0.18
MSLN-205ENST00000563941 MIR7-3HGQ8N6C7 128 aa13.96□□□□□ -0.18
MSLN-205ENST00000563941 A0A087WZ39 114 aa13.94□□□□□ -0.18
MSLN-205ENST00000563941 A0A1B0GV72 72 aa13.94□□□□□ -0.18
MSLN-205ENST00000563941 LINC00959A0A1B0GUT2 108 aa13.93□□□□□ -0.18
MSLN-205ENST00000563941 C5orf38Q86SI9 138 aa13.93□□□□□ -0.18
MSLN-205ENST00000563941 SMIM9A6NGZ8 99 aa13.93□□□□□ -0.18
MSLN-205ENST00000563941 SPATA3Q8NHX4 192 aa13.93□□□□□ -0.18
MSLN-205ENST00000563941 CKS1BP61024 79 aa13.92□□□□□ -0.18
MSLN-205ENST00000563941 LINC00158P58513 81 aa13.91□□□□□ -0.18
MSLN-205ENST00000563941 PRO0255Q9UI72 69 aa13.91□□□□□ -0.18
MSLN-205ENST00000563941 TRAV13-2A0A0B4J235 113 aa13.9□□□□□ -0.18
MSLN-205ENST00000563941 FAM222AQ5U5X8 452 aa13.9□□□□□ -0.18
MSLN-205ENST00000563941 SND1-IT1Q9HBX3 110 aa13.9□□□□□ -0.18
MSLN-205ENST00000563941 CRPP02741 224 aa13.9□□□□□ -0.18
MSLN-205ENST00000563941 DEFB121Q5J5C9 76 aa13.9□□□□□ -0.18
MSLN-205ENST00000563941 C9orf66Q5T8R8 295 aa13.9□□□□□ -0.18
MSLN-205ENST00000563941 CITED1Q99966 193 aa13.89□□□□□ -0.19
MSLN-205ENST00000563941 FN1P02751 2386 aaKnown RBP13.89□□□□□ -0.19
MSLN-205ENST00000563941 IBA57-AS1B1ANH7 110 aa13.88□□□□□ -0.19
MSLN-205ENST00000563941 LINC00337Q8N6G1 96 aa13.88□□□□□ -0.19
MSLN-205ENST00000563941 IGKV2-28A0A075B6P5 120 aa13.88□□□□□ -0.19
MSLN-205ENST00000563941 A0A096LPF7 62 aa13.88□□□□□ -0.19
MSLN-205ENST00000563941 A0A1B0GUV1 79 aa13.88□□□□□ -0.19
MSLN-205ENST00000563941 IGKV2D-28P01615 120 aa13.88□□□□□ -0.19
MSLN-205ENST00000563941 TRACP01848 142 aa13.87□□□□□ -0.19
MSLN-205ENST00000563941 NSD1Q96L73 2696 aaPredicted RBP13.87□□□□□ -0.19
MSLN-205ENST00000563941 RPL28P46779 137 aaKnown RBP13.87□□□□□ -0.19
MSLN-205ENST00000563941 XCL1P47992 114 aa13.87□□□□□ -0.19
MSLN-205ENST00000563941 LYRM9A8MSI8 78 aa13.86□□□□□ -0.19
MSLN-205ENST00000563941 SNCGO76070 127 aa13.86□□□□□ -0.19
MSLN-205ENST00000563941 CCL18P55774 89 aa13.86□□□□□ -0.19
MSLN-205ENST00000563941 SS18Q15532 418 aa13.86□□□□□ -0.19
MSLN-205ENST00000563941 FAM218AQ96MZ4 157 aa13.86□□□□□ -0.19
MSLN-205ENST00000563941 PAX4O43316 350 aa13.85□□□□□ -0.19
MSLN-205ENST00000563941 PFN2P35080 140 aa13.85□□□□□ -0.19
MSLN-205ENST00000563941 DEFB135Q30KP9 77 aa13.85□□□□□ -0.19
MSLN-205ENST00000563941 INAFM1C9JVW0 142 aa13.85□□□□□ -0.19
MSLN-205ENST00000563941 CLPSL2Q6UWE3 100 aa13.85□□□□□ -0.19
MSLN-205ENST00000563941 C11orf68Q9H3H3 251 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms