RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 CCL25O15444 150 aa11.39□□□□□ -0.59
E4F1-203ENST00000563643 XCL1P47992 114 aa11.39□□□□□ -0.59
E4F1-203ENST00000563643 MRPS36P82909 103 aaKnown RBP11.39□□□□□ -0.59
E4F1-203ENST00000563643 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
E4F1-203ENST00000563643 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
E4F1-203ENST00000563643 SDIM1Q6ZPB5 146 aa11.39□□□□□ -0.59
E4F1-203ENST00000563643 hDV102S1A0JD36 115 aa11.38□□□□□ -0.59
E4F1-203ENST00000563643 C1orf196B1AJZ1 125 aa11.38□□□□□ -0.59
E4F1-203ENST00000563643 RNASE13Q5GAN3 156 aaKnown RBP11.38□□□□□ -0.59
E4F1-203ENST00000563643 CD164L2Q6UWJ8 174 aa11.38□□□□□ -0.59
E4F1-203ENST00000563643 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
E4F1-203ENST00000563643 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
E4F1-203ENST00000563643 ORMDL2Q53FV1 153 aa11.37□□□□□ -0.59
E4F1-203ENST00000563643 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
E4F1-203ENST00000563643 TGIF2-C20orf24A0A0A6YYL0 155 aa11.36□□□□□ -0.59
E4F1-203ENST00000563643 TRAV13-1A0A0B4J241 112 aa11.36□□□□□ -0.59
E4F1-203ENST00000563643 IFI27P40305 119 aaPredicted RBP11.36□□□□□ -0.59
E4F1-203ENST00000563643 CNBPP62633 177 aaKnown RBP11.36□□□□□ -0.59
E4F1-203ENST00000563643 ALKBH7Q9BT30 221 aaPredicted RBP11.36□□□□□ -0.59
E4F1-203ENST00000563643 MRPL18Q9H0U6 180 aaKnown RBP11.36□□□□□ -0.59
E4F1-203ENST00000563643 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
E4F1-203ENST00000563643 OPRPNQ99935 248 aaPredicted RBP11.35□□□□□ -0.59
E4F1-203ENST00000563643 CYSLTR1Q9Y271 337 aa11.35□□□□□ -0.59
E4F1-203ENST00000563643 A0A087WYN8 130 aa11.34□□□□□ -0.59
E4F1-203ENST00000563643 FABP9Q0Z7S8 132 aa11.34□□□□□ -0.59
E4F1-203ENST00000563643 C2orf66Q6UXQ4 117 aa11.34□□□□□ -0.59
E4F1-203ENST00000563643 GVQW2A0A096LPI5 108 aaPredicted RBP11.33□□□□□ -0.6
E4F1-203ENST00000563643 REG3GQ6UW15 175 aa11.33□□□□□ -0.6
E4F1-203ENST00000563643 SLC7A5P1Q8MH63 180 aa11.33□□□□□ -0.6
E4F1-203ENST00000563643 C7orf33Q8WU49 177 aa11.33□□□□□ -0.6
E4F1-203ENST00000563643 IGLV4-3A0A075B6K6 122 aa11.32□□□□□ -0.6
E4F1-203ENST00000563643 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
E4F1-203ENST00000563643 IGHV1-58A0A0C4DH39 117 aa11.32□□□□□ -0.6
E4F1-203ENST00000563643 SLPIP03973 132 aa11.32□□□□□ -0.6
E4F1-203ENST00000563643 G0S2P27469 103 aa11.32□□□□□ -0.6
E4F1-203ENST00000563643 PRR3P79522 188 aaKnown RBP11.32□□□□□ -0.6
E4F1-203ENST00000563643 HIGD2BQ4VC39 106 aa11.32□□□□□ -0.6
E4F1-203ENST00000563643 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
E4F1-203ENST00000563643 DPH3Q96FX2 82 aa11.32□□□□□ -0.6
E4F1-203ENST00000563643 IFITM10A6NMD0 228 aa11.31□□□□□ -0.6
E4F1-203ENST00000563643 COX7A2LO14548 114 aa11.31□□□□□ -0.6
E4F1-203ENST00000563643 NPSP0C0P6 89 aa11.31□□□□□ -0.6
E4F1-203ENST00000563643 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
E4F1-203ENST00000563643 YPEL4Q96NS1 127 aa11.31□□□□□ -0.6
E4F1-203ENST00000563643 TRAPPC1Q9Y5R8 145 aa11.31□□□□□ -0.6
E4F1-203ENST00000563643 LINC01546A6NGU7 62 aa11.3□□□□□ -0.6
E4F1-203ENST00000563643 IGIPA6NJ69 53 aa11.29□□□□□ -0.6
E4F1-203ENST00000563643 CHTF8P0CG12 524 aa11.29□□□□□ -0.6
E4F1-203ENST00000563643 MALP21145 153 aa11.29□□□□□ -0.6
E4F1-203ENST00000563643 Q6ZN92 141 aa11.28□□□□□ -0.6
E4F1-203ENST00000563643 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
E4F1-203ENST00000563643 SPACA4Q8TDM5 124 aa11.28□□□□□ -0.6
E4F1-203ENST00000563643 TOMM6Q96B49 74 aa11.28□□□□□ -0.6
E4F1-203ENST00000563643 IGHV3-64A0A075B6Q5 118 aa11.27□□□□□ -0.61
E4F1-203ENST00000563643 IGHV3OR16-9A0A0B4J2B5 98 aa11.27□□□□□ -0.61
E4F1-203ENST00000563643 SPINK6Q6UWN8 80 aa11.27□□□□□ -0.61
E4F1-203ENST00000563643 SMCO4Q9NRQ5 59 aa11.27□□□□□ -0.61
E4F1-203ENST00000563643 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.61
E4F1-203ENST00000563643 FA2HQ7L5A8 372 aa11.26□□□□□ -0.61
E4F1-203ENST00000563643 C5orf38Q86SI9 138 aa11.26□□□□□ -0.61
E4F1-203ENST00000563643 CBLN2Q8IUK8 224 aa11.26□□□□□ -0.61
E4F1-203ENST00000563643 AMELXQ99217 191 aa11.26□□□□□ -0.61
E4F1-203ENST00000563643 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
E4F1-203ENST00000563643 C2orf88Q9BSF0 95 aa11.26□□□□□ -0.61
E4F1-203ENST00000563643 VCX2Q9H322 139 aa11.26□□□□□ -0.61
E4F1-203ENST00000563643 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
E4F1-203ENST00000563643 ZNF561-AS1K7EIQ3 104 aa11.25□□□□□ -0.61
E4F1-203ENST00000563643 APOMO95445 188 aa11.25□□□□□ -0.61
E4F1-203ENST00000563643 PAPPA-AS1Q5QFB9 102 aa11.25□□□□□ -0.61
E4F1-203ENST00000563643 LINC00173Q6ZV60 143 aa11.25□□□□□ -0.61
E4F1-203ENST00000563643 UBE2D1P51668 147 aa11.24□□□□□ -0.61
E4F1-203ENST00000563643 LINC00242Q5T6M2 205 aa11.24□□□□□ -0.61
E4F1-203ENST00000563643 ERASQ7Z444 233 aa11.24□□□□□ -0.61
E4F1-203ENST00000563643 C18orf32Q8TCD1 76 aa11.24□□□□□ -0.61
E4F1-203ENST00000563643 LINC00526Q96FQ7 95 aa11.24□□□□□ -0.61
E4F1-203ENST00000563643 CRCT1Q9UGL9 99 aa11.23□□□□□ -0.61
E4F1-203ENST00000563643 ZC2HC1BQ5TFG8 222 aa11.22□□□□□ -0.61
E4F1-203ENST00000563643 OR10D4PQ8NGN7 298 aa11.22□□□□□ -0.61
E4F1-203ENST00000563643 CARD19Q96LW7 228 aa11.22□□□□□ -0.61
E4F1-203ENST00000563643 SCGB3A1Q96QR1 104 aa11.22□□□□□ -0.61
E4F1-203ENST00000563643 IGLV4-69A0A075B6H9 119 aa11.21□□□□□ -0.61
E4F1-203ENST00000563643 A0A087WZ39 114 aa11.21□□□□□ -0.61
E4F1-203ENST00000563643 SYCNQ0VAF6 134 aa11.21□□□□□ -0.61
E4F1-203ENST00000563643 LINC00614P0C842 121 aa11.2□□□□□ -0.62
E4F1-203ENST00000563643 COX6A2Q02221 97 aa11.2□□□□□ -0.62
E4F1-203ENST00000563643 SPAG11BQ08648 103 aa11.2□□□□□ -0.62
E4F1-203ENST00000563643 FAM19A3Q7Z5A8 133 aa11.2□□□□□ -0.62
E4F1-203ENST00000563643 URB1-AS1Q96HZ7 61 aa11.2□□□□□ -0.62
E4F1-203ENST00000563643 C2orf48Q96LS8 159 aa11.2□□□□□ -0.62
E4F1-203ENST00000563643 ORAOV1Q8WV07 137 aa11.19□□□□□ -0.62
E4F1-203ENST00000563643 PKIGQ9Y2B9 76 aa11.19□□□□□ -0.62
E4F1-203ENST00000563643 RAB5BP61020 215 aa11.18□□□□□ -0.62
E4F1-203ENST00000563643 SEC11AP67812 179 aa11.18□□□□□ -0.62
E4F1-203ENST00000563643 F8WDY8 70 aa11.17□□□□□ -0.62
E4F1-203ENST00000563643 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
E4F1-203ENST00000563643 LINC01561Q8N1V8 128 aa11.17□□□□□ -0.62
E4F1-203ENST00000563643 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
E4F1-203ENST00000563643 A0A096LNJ9 63 aa11.16□□□□□ -0.62
E4F1-203ENST00000563643 HBDP02042 147 aa11.15□□□□□ -0.62
E4F1-203ENST00000563643 HERVK_113P63121 156 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms