RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 MAP1LC3AQ9H492 121 aa6.95□□□□□ -1.3
LPCAT4-202ENST00000562404 A0A0J9YXV3 536 aa6.94□□□□□ -1.3
LPCAT4-202ENST00000562404 IFITM10A6NMD0 228 aa6.94□□□□□ -1.3
LPCAT4-202ENST00000562404 RAB5AP20339 215 aa6.94□□□□□ -1.3
LPCAT4-202ENST00000562404 KIAA1644Q3SXP7 199 aa6.94□□□□□ -1.3
LPCAT4-202ENST00000562404 Q8N8P6 123 aa6.94□□□□□ -1.3
LPCAT4-202ENST00000562404 LAMTOR2Q9Y2Q5 125 aa6.94□□□□□ -1.3
LPCAT4-202ENST00000562404 PYGO1Q9Y3Y4 419 aa6.94□□□□□ -1.3
LPCAT4-202ENST00000562404 HMCN2Q8NDA2 5059 aa6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 OXTP01178 125 aa6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 SPAG11BQ08648 103 aa6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 LINC00242Q5T6M2 205 aa6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 C10orf25Q5T742 122 aa6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 LINC00173Q6ZV60 143 aa6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 CAMK2N2Q96S95 79 aa6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 IMMP2LQ96T52 175 aa6.93□□□□□ -1.3
LPCAT4-202ENST00000562404 A0A1W2PNN7 141 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 IFI27P40305 119 aaPredicted RBP6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 C2orf66Q6UXQ4 117 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 COMMD7Q86VX2 200 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 C2orf48Q96LS8 159 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 SEC11CQ9BY50 192 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
LPCAT4-202ENST00000562404 LOC107984640A0A0U1RRK4 108 aa6.91□□□□□ -1.3
LPCAT4-202ENST00000562404 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
LPCAT4-202ENST00000562404 UBE2D1P51668 147 aa6.91□□□□□ -1.3
LPCAT4-202ENST00000562404 KIAA0087Q14695 138 aa6.91□□□□□ -1.3
LPCAT4-202ENST00000562404 C10orf91Q5T1B1 145 aa6.91□□□□□ -1.3
LPCAT4-202ENST00000562404 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
LPCAT4-202ENST00000562404 IGIPA6NJ69 53 aa6.9□□□□□ -1.3
LPCAT4-202ENST00000562404 APOMO95445 188 aa6.9□□□□□ -1.3
LPCAT4-202ENST00000562404 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
LPCAT4-202ENST00000562404 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
LPCAT4-202ENST00000562404 OR10D4PQ8NGN7 298 aa6.9□□□□□ -1.3
LPCAT4-202ENST00000562404 AMELXQ99217 191 aa6.9□□□□□ -1.3
LPCAT4-202ENST00000562404 CYSLTR1Q9Y271 337 aa6.9□□□□□ -1.3
LPCAT4-202ENST00000562404 A0A087WZ39 114 aa6.89□□□□□ -1.31
LPCAT4-202ENST00000562404 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
LPCAT4-202ENST00000562404 LINC00474Q9P2X8 69 aa6.89□□□□□ -1.31
LPCAT4-202ENST00000562404 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
LPCAT4-202ENST00000562404 TRAV9-1A0A075B6T8 112 aa6.88□□□□□ -1.31
LPCAT4-202ENST00000562404 TGIF2-C20orf24A0A0A6YYL0 155 aa6.88□□□□□ -1.31
LPCAT4-202ENST00000562404 RPL18AQ02543 176 aaKnown RBP6.88□□□□□ -1.31
LPCAT4-202ENST00000562404 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
LPCAT4-202ENST00000562404 C9orf116Q5BN46 136 aaPredicted RBP6.88□□□□□ -1.31
LPCAT4-202ENST00000562404 TEX43Q6ZNM6 134 aa6.88□□□□□ -1.31
LPCAT4-202ENST00000562404 NXT2Q9NPJ8 142 aaKnown RBP6.88□□□□□ -1.31
LPCAT4-202ENST00000562404 MRPL35Q9NZE8 188 aaKnown RBP6.88□□□□□ -1.31
LPCAT4-202ENST00000562404 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
LPCAT4-202ENST00000562404 C2orf82Q6UX34 121 aa6.87□□□□□ -1.31
LPCAT4-202ENST00000562404 Q6ZRP5 223 aa6.87□□□□□ -1.31
LPCAT4-202ENST00000562404 ALKBH7Q9BT30 221 aaPredicted RBP6.87□□□□□ -1.31
LPCAT4-202ENST00000562404 GNB1LQ9BYB4 327 aa6.87□□□□□ -1.31
LPCAT4-202ENST00000562404 CARHSP1Q9Y2V2 147 aaKnown RBP6.87□□□□□ -1.31
LPCAT4-202ENST00000562404 FAM168BA1KXE4 195 aa6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 K7EMI3 77 aa6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 NDUFA1O15239 70 aa6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 FAM19A3Q7Z5A8 133 aa6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 VCX2Q9H322 139 aa6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
LPCAT4-202ENST00000562404 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
LPCAT4-202ENST00000562404 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
LPCAT4-202ENST00000562404 RPS10P5Q9NQ39 176 aa6.85□□□□□ -1.31
LPCAT4-202ENST00000562404 F8WDY8 70 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 NPSP0C0P6 89 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 TLX1NBP0CAT3 122 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 S100PP25815 95 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 SRSF9Q13242 221 aaKnown RBP eCLIP6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 ODF1Q14990 250 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 Q6ZN92 141 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 TIMM17AQ99595 171 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 CDKN2A-AS1Q9UH64 79 aa6.84□□□□□ -1.31
LPCAT4-202ENST00000562404 RHEBQ15382 184 aa6.83□□□□□ -1.32
LPCAT4-202ENST00000562404 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
LPCAT4-202ENST00000562404 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
LPCAT4-202ENST00000562404 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
LPCAT4-202ENST00000562404 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
LPCAT4-202ENST00000562404 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
LPCAT4-202ENST00000562404 FABP9Q0Z7S8 132 aa6.82□□□□□ -1.32
LPCAT4-202ENST00000562404 ERASQ7Z444 233 aa6.82□□□□□ -1.32
LPCAT4-202ENST00000562404 SCGB3A1Q96QR1 104 aa6.82□□□□□ -1.32
LPCAT4-202ENST00000562404 TOMM7Q9P0U1 55 aa6.82□□□□□ -1.32
LPCAT4-202ENST00000562404 UBR4Q5T4S7 5183 aa6.81□□□□□ -1.32
LPCAT4-202ENST00000562404 A0A096LNJ9 63 aa6.81□□□□□ -1.32
LPCAT4-202ENST00000562404 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
LPCAT4-202ENST00000562404 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
LPCAT4-202ENST00000562404 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
LPCAT4-202ENST00000562404 FAM19A5Q7Z5A7 132 aaPredicted RBP6.81□□□□□ -1.32
LPCAT4-202ENST00000562404 APOC3P02656 99 aa6.8□□□□□ -1.32
LPCAT4-202ENST00000562404 MT-ND6P03923 174 aa6.8□□□□□ -1.32
LPCAT4-202ENST00000562404 HERVK_113P63121 156 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms