RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 PRELID3AQ96N28 172 aa8.41□□□□□ -1.06
USB1-205ENST00000561743 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
USB1-205ENST00000561743 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.4□□□□□ -1.06
USB1-205ENST00000561743 OR10D4PQ8NGN7 298 aa8.4□□□□□ -1.06
USB1-205ENST00000561743 A0A1W2PNN7 141 aa8.39□□□□□ -1.07
USB1-205ENST00000561743 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
USB1-205ENST00000561743 PRSS47A8MTI9 375 aa8.39□□□□□ -1.07
USB1-205ENST00000561743 RAB5AP20339 215 aa8.39□□□□□ -1.07
USB1-205ENST00000561743 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
USB1-205ENST00000561743 A0A0J9YXV3 536 aa8.38□□□□□ -1.07
USB1-205ENST00000561743 IFI27P40305 119 aaPredicted RBP8.38□□□□□ -1.07
USB1-205ENST00000561743 ORAOV1Q8WV07 137 aa8.38□□□□□ -1.07
USB1-205ENST00000561743 LAMTOR2Q9Y2Q5 125 aa8.38□□□□□ -1.07
USB1-205ENST00000561743 PYGO1Q9Y3Y4 419 aa8.38□□□□□ -1.07
USB1-205ENST00000561743 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
USB1-205ENST00000561743 MT-ND4LP03901 98 aa8.37□□□□□ -1.07
USB1-205ENST00000561743 RAB14P61106 215 aa8.37□□□□□ -1.07
USB1-205ENST00000561743 RPL18AQ02543 176 aaKnown RBP8.37□□□□□ -1.07
USB1-205ENST00000561743 RNF151Q2KHN1 245 aa8.37□□□□□ -1.07
USB1-205ENST00000561743 Q6ZRP5 223 aa8.37□□□□□ -1.07
USB1-205ENST00000561743 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
USB1-205ENST00000561743 MRPL35Q9NZE8 188 aaKnown RBP8.37□□□□□ -1.07
USB1-205ENST00000561743 UBR4Q5T4S7 5183 aa8.36□□□□□ -1.07
USB1-205ENST00000561743 LOC389332A0A1B0GUA5 103 aa8.36□□□□□ -1.07
USB1-205ENST00000561743 C9orf116Q5BN46 136 aaPredicted RBP8.36□□□□□ -1.07
USB1-205ENST00000561743 SPINK6Q6UWN8 80 aa8.36□□□□□ -1.07
USB1-205ENST00000561743 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
USB1-205ENST00000561743 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
USB1-205ENST00000561743 F8WDY8 70 aa8.35□□□□□ -1.07
USB1-205ENST00000561743 NDUFA1O15239 70 aa8.35□□□□□ -1.07
USB1-205ENST00000561743 SRSF9Q13242 221 aaKnown RBP eCLIP8.35□□□□□ -1.07
USB1-205ENST00000561743 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
USB1-205ENST00000561743 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
USB1-205ENST00000561743 TMEM141Q96I45 108 aa8.35□□□□□ -1.07
USB1-205ENST00000561743 TNXBP22105 4242 aa8.34□□□□□ -1.07
USB1-205ENST00000561743 A0A087WZ39 114 aa8.34□□□□□ -1.07
USB1-205ENST00000561743 CLLU1Q5K131 121 aa8.34□□□□□ -1.07
USB1-205ENST00000561743 UNQ6190/PRO20217Q6UXQ8 127 aa8.34□□□□□ -1.07
USB1-205ENST00000561743 Q8N8P6 123 aa8.34□□□□□ -1.07
USB1-205ENST00000561743 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
USB1-205ENST00000561743 C2orf66Q6UXQ4 117 aa8.33□□□□□ -1.08
USB1-205ENST00000561743 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
USB1-205ENST00000561743 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
USB1-205ENST00000561743 CYSLTR1Q9Y271 337 aa8.33□□□□□ -1.08
USB1-205ENST00000561743 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
USB1-205ENST00000561743 ADCYAP1P18509 176 aa8.32□□□□□ -1.08
USB1-205ENST00000561743 UBE2D1P51668 147 aa8.32□□□□□ -1.08
USB1-205ENST00000561743 REG3GQ6UW15 175 aa8.32□□□□□ -1.08
USB1-205ENST00000561743 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
USB1-205ENST00000561743 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
USB1-205ENST00000561743 IMMP2LQ96T52 175 aa8.32□□□□□ -1.08
USB1-205ENST00000561743 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
USB1-205ENST00000561743 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
USB1-205ENST00000561743 ZC2HC1BQ5TFG8 222 aa8.31□□□□□ -1.08
USB1-205ENST00000561743 AMELXQ99217 191 aa8.31□□□□□ -1.08
USB1-205ENST00000561743 FAM168BA1KXE4 195 aa8.3□□□□□ -1.08
USB1-205ENST00000561743 K7EMI3 77 aa8.3□□□□□ -1.08
USB1-205ENST00000561743 ODF1Q14990 250 aa8.3□□□□□ -1.08
USB1-205ENST00000561743 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
USB1-205ENST00000561743 CTDSP1Q9GZU7 261 aa8.3□□□□□ -1.08
USB1-205ENST00000561743 IGIPA6NJ69 53 aa8.29□□□□□ -1.08
USB1-205ENST00000561743 MT-ND6P03923 174 aa8.29□□□□□ -1.08
USB1-205ENST00000561743 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
USB1-205ENST00000561743 Q6ZN92 141 aa8.29□□□□□ -1.08
USB1-205ENST00000561743 VCX2Q9H322 139 aa8.29□□□□□ -1.08
USB1-205ENST00000561743 NXT2Q9NPJ8 142 aaKnown RBP8.29□□□□□ -1.08
USB1-205ENST00000561743 TRBV30A0A0K0K1B3 111 aa8.28□□□□□ -1.08
USB1-205ENST00000561743 NPSP0C0P6 89 aa8.28□□□□□ -1.08
USB1-205ENST00000561743 KRTAP10-8P60410 259 aa8.28□□□□□ -1.08
USB1-205ENST00000561743 IFITM2Q01629 132 aa8.28□□□□□ -1.08
USB1-205ENST00000561743 GAGE2EQ4V326 116 aa8.28□□□□□ -1.08
USB1-205ENST00000561743 UQCC3Q6UW78 93 aa8.28□□□□□ -1.08
USB1-205ENST00000561743 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
USB1-205ENST00000561743 GAGE2DQ9UEU5 116 aa8.28□□□□□ -1.08
USB1-205ENST00000561743 TMEM218A2RU14 115 aa8.27□□□□□ -1.09
USB1-205ENST00000561743 KIAA1644Q3SXP7 199 aa8.27□□□□□ -1.09
USB1-205ENST00000561743 C1orf137Q5JT78 98 aa8.27□□□□□ -1.09
USB1-205ENST00000561743 FAM19A5Q7Z5A7 132 aaPredicted RBP8.27□□□□□ -1.09
USB1-205ENST00000561743 FAM19A3Q7Z5A8 133 aa8.27□□□□□ -1.09
USB1-205ENST00000561743 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
USB1-205ENST00000561743 KRTAP11-1Q8IUC1 163 aa8.26□□□□□ -1.09
USB1-205ENST00000561743 TRAV9-1A0A075B6T8 112 aa8.25□□□□□ -1.09
USB1-205ENST00000561743 NDUFC2-KCTD14E9PQ53 114 aa8.25□□□□□ -1.09
USB1-205ENST00000561743 TOMM6Q96B49 74 aa8.25□□□□□ -1.09
USB1-205ENST00000561743 PACRGQ96M98 296 aaPredicted RBP8.25□□□□□ -1.09
USB1-205ENST00000561743 TIMM17AQ99595 171 aa8.25□□□□□ -1.09
USB1-205ENST00000561743 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
USB1-205ENST00000561743 LRP2P98164 4655 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 M0QXV9 152 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 IGLV7-43P04211 117 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 PRSS2P07478 247 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 G0S2P27469 103 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 HERVK_113P63121 156 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 PAPPA-AS1Q5QFB9 102 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 Q8IZM0 81 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 SEC11CQ9BY50 192 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 TOMM7Q9P0U1 55 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
USB1-205ENST00000561743 CKS1BP61024 79 aa8.22□□□□□ -1.09
USB1-205ENST00000561743 SEC11AP67812 179 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms