RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 C3orf79P0CE67 100 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 IFI27P40305 119 aaPredicted RBP1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 C5orf56Q8N8D9 126 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 TXNDC17Q9BRA2 123 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 UBE2D4Q9Y2X8 147 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 COL4A2P08572 1712 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 RGPD1P0DJD0 1748 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 BTAF1O14981 1849 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 TET1Q8NFU7 2136 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 COL5A3P25940 1745 aaPredicted RBP1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 ARHGEF5Q12774 1597 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 URB2Q14146 1524 aaKnown RBP1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 H3BVH4 76 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 M0R2N4 97 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 UQCR11O14957 56 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 BAGE3Q86Y29 109 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 LINC00304Q8N9R0 145 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 FDCSPQ8NFU4 85 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 WFDC6Q9BQY6 131 aa1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 FN1P02751 2386 aaKnown RBP1.78□□□□□ -2.12
TNRC6A-208ENST00000561726 SHROOM3Q8TF72 1996 aa1.78□□□□□ -2.13
TNRC6A-208ENST00000561726 PCDH15Q96QU1 1955 aa1.78□□□□□ -2.13
TNRC6A-208ENST00000561726 ARFGEF1Q9Y6D6 1849 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 CCDC180Q9P1Z9 1646 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 TIAM1Q13009 1591 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 C1orf167Q5SNV9 1468 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 A0A087WTM6 91 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 A0A087WVE0 104 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 LOC110117498A0A087WWA1 95 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 ATP5EP2Q5VTU8 51 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 HCP5Q6MZN7 132 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 IGFL1Q6UW32 110 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 LINC00208Q96KT6 92 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 GNG13Q9P2W3 67 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 ITSN1Q15811 1721 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 RREB1Q92766 1687 aa1.77□□□□□ -2.13
TNRC6A-208ENST00000561726 MYO7BQ6PIF6 2116 aa1.76□□□□□ -2.13
TNRC6A-208ENST00000561726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.76□□□□□ -2.13
TNRC6A-208ENST00000561726 MGPP08493 103 aa1.76□□□□□ -2.13
TNRC6A-208ENST00000561726 ZNF137PP52743 207 aa1.76□□□□□ -2.13
TNRC6A-208ENST00000561726 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
TNRC6A-208ENST00000561726 SNURFQ9Y675 71 aa1.76□□□□□ -2.13
TNRC6A-208ENST00000561726 PLXNC1O60486 1568 aa1.76□□□□□ -2.13
TNRC6A-208ENST00000561726 Q6ZRN7 208 aaPredicted RBP1.75□□□□□ -2.13
TNRC6A-208ENST00000561726 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
TNRC6A-208ENST00000561726 LINC00846Q9NV44 126 aa1.75□□□□□ -2.13
TNRC6A-208ENST00000561726 ABCA9Q8IUA7 1624 aa1.75□□□□□ -2.13
TNRC6A-208ENST00000561726 MAP2P11137 1827 aaKnown RBP1.75□□□□□ -2.13
TNRC6A-208ENST00000561726 TNRC6BQ9UPQ9 1833 aaKnown RBP1.75□□□□□ -2.13
TNRC6A-208ENST00000561726 SDK1Q7Z5N4 2213 aa1.74□□□□□ -2.13
TNRC6A-208ENST00000561726 RAPGEF6Q8TEU7 1601 aa1.74□□□□□ -2.13
TNRC6A-208ENST00000561726 FXYD6-FXYD2A0A087WZ82 144 aa1.74□□□□□ -2.13
TNRC6A-208ENST00000561726 S100A3P33764 101 aa1.74□□□□□ -2.13
TNRC6A-208ENST00000561726 SPRR4Q96PI1 79 aa1.74□□□□□ -2.13
TNRC6A-208ENST00000561726 DNAJC13O75165 2243 aa1.74□□□□□ -2.13
TNRC6A-208ENST00000561726 MYO7AQ13402 2215 aa1.74□□□□□ -2.13
TNRC6A-208ENST00000561726 SCN7AQ01118 1682 aa1.74□□□□□ -2.13
TNRC6A-208ENST00000561726 TRGV2A0A075B6R0 118 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 TRGV1A0A0A0MS02 117 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 TRBV7-4A0A0J9YYF1 115 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 A0A1B0GUT8 65 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 IGKV4-1P06312 121 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 GDF5OSQ5U4N7 250 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 DEFB107AQ8IZN7 70 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 Q96NJ1 140 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 PLAC8Q9NZF1 115 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 PRXQ9BXM0 1461 aa1.73□□□□□ -2.13
TNRC6A-208ENST00000561726 ADGRB2O60241 1585 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 LOC285556D6RIA3 1793 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 NKTRP30414 1462 aaKnown RBP1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 FANCD2Q9BXW9 1451 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 CD163L1Q9NR16 1453 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 TRAV1-2A0A0B4J238 106 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 CAV3P56539 151 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 COX17Q14061 63 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 ATXN8Q156A1 80 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 SMIM4Q8WVI0 70 aa1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 FAM103A1Q9BTL3 118 aaKnown RBP1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 COL5A1P20908 1838 aaPredicted RBP1.72□□□□□ -2.13
TNRC6A-208ENST00000561726 KIF1AQ12756 1690 aa1.71□□□□□ -2.14
TNRC6A-208ENST00000561726 ABCA6Q8N139 1617 aa1.71□□□□□ -2.14
TNRC6A-208ENST00000561726 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
TNRC6A-208ENST00000561726 SIPA1L3O60292 1781 aaPredicted RBP1.71□□□□□ -2.14
TNRC6A-208ENST00000561726 CDC42BPGQ6DT37 1551 aa1.71□□□□□ -2.14
TNRC6A-208ENST00000561726 XRN1Q8IZH2 1706 aaKnown RBP1.71□□□□□ -2.14
TNRC6A-208ENST00000561726 ATP7BP35670 1465 aa1.7□□□□□ -2.14
TNRC6A-208ENST00000561726 H0Y9P7 68 aa1.7□□□□□ -2.14
TNRC6A-208ENST00000561726 ACYP2P14621 99 aa1.7□□□□□ -2.14
TNRC6A-208ENST00000561726 SPINK7P58062 85 aa1.7□□□□□ -2.14
TNRC6A-208ENST00000561726 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
TNRC6A-208ENST00000561726 Q6ZQY7 126 aa1.7□□□□□ -2.14
TNRC6A-208ENST00000561726 ICE1Q9Y2F5 2266 aa1.7□□□□□ -2.14
TNRC6A-208ENST00000561726 ZMYM4Q5VZL5 1548 aa1.7□□□□□ -2.14
TNRC6A-208ENST00000561726 RNF17Q9BXT8 1623 aaKnown RBP1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 RALGAPBQ86X10 1494 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 GLI2P10070 1586 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 CEP170BQ9Y4F5 1589 aaPredicted RBP1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 A0A0D9SFI3 127 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 HCRTO43612 131 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 IFI6P09912 130 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms