RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 SPINK8P0C7L1 97 aa9.89□□□□□ -0.83
ZEB1-218ENST00000560196 SS18Q15532 418 aa9.89□□□□□ -0.83
ZEB1-218ENST00000560196 LINC01561Q8N1V8 128 aa9.89□□□□□ -0.83
ZEB1-218ENST00000560196 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
ZEB1-218ENST00000560196 IGHV3OR16-9A0A0B4J2B5 98 aa9.88□□□□□ -0.83
ZEB1-218ENST00000560196 SMIM1B2RUZ4 78 aa9.88□□□□□ -0.83
ZEB1-218ENST00000560196 TAL2Q16559 108 aa9.88□□□□□ -0.83
ZEB1-218ENST00000560196 ESRGQ1W209 222 aa9.88□□□□□ -0.83
ZEB1-218ENST00000560196 ANGP03950 147 aaKnown RBP9.87□□□□□ -0.83
ZEB1-218ENST00000560196 HINT1P49773 126 aaPredicted RBP9.87□□□□□ -0.83
ZEB1-218ENST00000560196 BVES-AS1Q5T3Y7 98 aa9.87□□□□□ -0.83
ZEB1-218ENST00000560196 ZFAND6Q6FIF0 208 aa9.87□□□□□ -0.83
ZEB1-218ENST00000560196 PRR34Q9NV39 138 aa9.87□□□□□ -0.83
ZEB1-218ENST00000560196 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
ZEB1-218ENST00000560196 A0A087WZ39 114 aa9.86□□□□□ -0.83
ZEB1-218ENST00000560196 IGKV3OR2-268A0A0C4DH90 116 aa9.86□□□□□ -0.83
ZEB1-218ENST00000560196 REG3AQ06141 175 aa9.86□□□□□ -0.83
ZEB1-218ENST00000560196 LINC00269Q8N2A0 174 aa9.86□□□□□ -0.83
ZEB1-218ENST00000560196 SPANXB1Q9NS25 103 aaPredicted RBP9.85□□□□□ -0.83
ZEB1-218ENST00000560196 LINC01556Q5JQF7 62 aa9.84□□□□□ -0.83
ZEB1-218ENST00000560196 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
ZEB1-218ENST00000560196 WFDC10BQ8IUB3 73 aa9.84□□□□□ -0.83
ZEB1-218ENST00000560196 Q8N3U1 123 aa9.84□□□□□ -0.83
ZEB1-218ENST00000560196 NDUFA12Q9UI09 145 aa9.84□□□□□ -0.83
ZEB1-218ENST00000560196 NDUFA1O15239 70 aa9.83□□□□□ -0.84
ZEB1-218ENST00000560196 BATFQ16520 125 aa9.83□□□□□ -0.84
ZEB1-218ENST00000560196 COL5A1-AS1Q5SY13 56 aa9.83□□□□□ -0.84
ZEB1-218ENST00000560196 CD164L2Q6UWJ8 174 aa9.83□□□□□ -0.84
ZEB1-218ENST00000560196 ORAOV1Q8WV07 137 aa9.83□□□□□ -0.84
ZEB1-218ENST00000560196 DNAH9Q9NYC9 4486 aa9.83□□□□□ -0.84
ZEB1-218ENST00000560196 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
ZEB1-218ENST00000560196 C10orf126Q8N4M7 172 aa9.82□□□□□ -0.84
ZEB1-218ENST00000560196 CHCHD10Q8WYQ3 142 aaPredicted RBP9.82□□□□□ -0.84
ZEB1-218ENST00000560196 TM2D2Q9BX73 214 aa9.82□□□□□ -0.84
ZEB1-218ENST00000560196 KLK12Q9UKR0 248 aa9.82□□□□□ -0.84
ZEB1-218ENST00000560196 TRAV8-4A0A0B4J246 113 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 A0A0J9YXY3 114 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 IGLL5B9A064 214 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 IGHV3-30P01768 117 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 IGHV3-33P01772 117 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 IGHV3-30-5P0DP03 117 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 XCL1P47992 114 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 ENHOQ6UWT2 76 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 CEND1Q8N111 149 aa9.81□□□□□ -0.84
ZEB1-218ENST00000560196 TIMM17BO60830 172 aa9.8□□□□□ -0.84
ZEB1-218ENST00000560196 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
ZEB1-218ENST00000560196 CCL18P55774 89 aa9.8□□□□□ -0.84
ZEB1-218ENST00000560196 C5orf38Q86SI9 138 aa9.8□□□□□ -0.84
ZEB1-218ENST00000560196 COX7B2Q8TF08 81 aa9.8□□□□□ -0.84
ZEB1-218ENST00000560196 HIST1H4GQ99525 98 aa9.8□□□□□ -0.84
ZEB1-218ENST00000560196 HERV-K104P63124 156 aa9.79□□□□□ -0.84
ZEB1-218ENST00000560196 MIAQ16674 131 aa9.79□□□□□ -0.84
ZEB1-218ENST00000560196 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
ZEB1-218ENST00000560196 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
ZEB1-218ENST00000560196 LINC00588Q9Y4M8 146 aa9.79□□□□□ -0.84
ZEB1-218ENST00000560196 A6NDN8 102 aa9.78□□□□□ -0.84
ZEB1-218ENST00000560196 TMEM238C9JI98 176 aa9.78□□□□□ -0.84
ZEB1-218ENST00000560196 COX7A2LO14548 114 aa9.78□□□□□ -0.84
ZEB1-218ENST00000560196 CRPP02741 224 aa9.78□□□□□ -0.84
ZEB1-218ENST00000560196 GCSHP23434 173 aa9.78□□□□□ -0.84
ZEB1-218ENST00000560196 FOXI1Q12951 378 aa9.78□□□□□ -0.84
ZEB1-218ENST00000560196 SFTA2Q6UW10 78 aa9.78□□□□□ -0.84
ZEB1-218ENST00000560196 SRSF9Q13242 221 aaKnown RBP eCLIP9.77□□□□□ -0.85
ZEB1-218ENST00000560196 Q6ZVH6 145 aa9.77□□□□□ -0.85
ZEB1-218ENST00000560196 LITAFQ99732 161 aa9.77□□□□□ -0.85
ZEB1-218ENST00000560196 Q9H8V8 135 aa9.77□□□□□ -0.85
ZEB1-218ENST00000560196 NUPR2A6NF83 97 aa9.76□□□□□ -0.85
ZEB1-218ENST00000560196 FXYD2P54710 66 aa9.76□□□□□ -0.85
ZEB1-218ENST00000560196 Q8IZM0 81 aa9.76□□□□□ -0.85
ZEB1-218ENST00000560196 UBE2WQ96B02 151 aa9.76□□□□□ -0.85
ZEB1-218ENST00000560196 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
ZEB1-218ENST00000560196 SPANXCQ9NY87 97 aa9.76□□□□□ -0.85
ZEB1-218ENST00000560196 APLNQ9ULZ1 77 aa9.76□□□□□ -0.85
ZEB1-218ENST00000560196 IGLV10-54A0A075B6I4 117 aa9.75□□□□□ -0.85
ZEB1-218ENST00000560196 GAGE12HA6NDE8 117 aa9.75□□□□□ -0.85
ZEB1-218ENST00000560196 PTTG1IPP53801 180 aa9.74□□□□□ -0.85
ZEB1-218ENST00000560196 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
ZEB1-218ENST00000560196 KRTAP26-1Q6PEX3 210 aa9.74□□□□□ -0.85
ZEB1-218ENST00000560196 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
ZEB1-218ENST00000560196 DNHD1Q96M86 4753 aa9.73□□□□□ -0.85
ZEB1-218ENST00000560196 TMEM238LA0A1B0GVL6 79 aa9.73□□□□□ -0.85
ZEB1-218ENST00000560196 A0A1B0GWB2 263 aa9.73□□□□□ -0.85
ZEB1-218ENST00000560196 A6NJY4 79 aa9.73□□□□□ -0.85
ZEB1-218ENST00000560196 K7EP13 123 aa9.73□□□□□ -0.85
ZEB1-218ENST00000560196 APOMO95445 188 aa9.73□□□□□ -0.85
ZEB1-218ENST00000560196 CXCL5P42830 114 aa9.73□□□□□ -0.85
ZEB1-218ENST00000560196 TOMM7Q9P0U1 55 aa9.73□□□□□ -0.85
ZEB1-218ENST00000560196 PRSS2P07478 247 aa9.72□□□□□ -0.85
ZEB1-218ENST00000560196 IFITM1P13164 125 aa9.72□□□□□ -0.85
ZEB1-218ENST00000560196 MALP21145 153 aa9.72□□□□□ -0.85
ZEB1-218ENST00000560196 KIAA0087Q14695 138 aa9.72□□□□□ -0.85
ZEB1-218ENST00000560196 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
ZEB1-218ENST00000560196 IBA57-AS1B1ANH7 110 aa9.71□□□□□ -0.86
ZEB1-218ENST00000560196 TAX1BP3O14907 124 aa9.71□□□□□ -0.86
ZEB1-218ENST00000560196 SMIM13P0DJ93 91 aa9.71□□□□□ -0.86
ZEB1-218ENST00000560196 C6orf226Q5I0X4 101 aa9.71□□□□□ -0.86
ZEB1-218ENST00000560196 ADAMTSL4-AS1Q5T5F5 129 aa9.71□□□□□ -0.86
ZEB1-218ENST00000560196 RPL24P83731 157 aaKnown RBP9.7□□□□□ -0.86
ZEB1-218ENST00000560196 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
ZEB1-218ENST00000560196 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms