RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 KRTAP10-9P60411 292 aa13.84□□□□□ -0.19
SEMA4B-215ENST00000560089 ATP5EP2Q5VTU8 51 aa13.84□□□□□ -0.19
SEMA4B-215ENST00000560089 IL17DQ8TAD2 202 aa13.84□□□□□ -0.19
SEMA4B-215ENST00000560089 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
SEMA4B-215ENST00000560089 GCN1Q92616 2671 aaKnown RBP13.83□□□□□ -0.2
SEMA4B-215ENST00000560089 ABCA2Q9BZC7 2435 aa13.83□□□□□ -0.2
SEMA4B-215ENST00000560089 TRBV7-6A0A0J9YX20 115 aa13.83□□□□□ -0.2
SEMA4B-215ENST00000560089 NAV2Q8IVL1 2488 aa13.82□□□□□ -0.2
SEMA4B-215ENST00000560089 CCKP06307 115 aa13.82□□□□□ -0.2
SEMA4B-215ENST00000560089 SS18Q15532 418 aa13.81□□□□□ -0.2
SEMA4B-215ENST00000560089 SNURFQ9Y675 71 aa13.81□□□□□ -0.2
SEMA4B-215ENST00000560089 TRAV7A0A075B6U4 112 aa13.81□□□□□ -0.2
SEMA4B-215ENST00000560089 F8WEM9 126 aa13.81□□□□□ -0.2
SEMA4B-215ENST00000560089 TRAV13-2A0A0B4J235 113 aa13.8□□□□□ -0.2
SEMA4B-215ENST00000560089 CRPP02741 224 aa13.8□□□□□ -0.2
SEMA4B-215ENST00000560089 LMO4P61968 165 aa13.8□□□□□ -0.2
SEMA4B-215ENST00000560089 KLKP1Q107X0 134 aa13.8□□□□□ -0.2
SEMA4B-215ENST00000560089 PIK3CD-AS1Q5SR53 167 aa13.8□□□□□ -0.2
SEMA4B-215ENST00000560089 IGKV3-7A0A075B6H7 116 aa13.79□□□□□ -0.2
SEMA4B-215ENST00000560089 IGHV4-30-2A0A087WSY4 118 aa13.79□□□□□ -0.2
SEMA4B-215ENST00000560089 IGHV4-61A0A0C4DH41 118 aa13.79□□□□□ -0.2
SEMA4B-215ENST00000560089 RMI2Q96E14 147 aa13.79□□□□□ -0.2
SEMA4B-215ENST00000560089 KLK9Q9UKQ9 250 aa13.79□□□□□ -0.2
SEMA4B-215ENST00000560089 KLLNB2CW77 178 aa13.78□□□□□ -0.2
SEMA4B-215ENST00000560089 A0A1W2PRX2 142 aa13.77□□□□□ -0.2
SEMA4B-215ENST00000560089 PF4P02776 101 aa13.77□□□□□ -0.2
SEMA4B-215ENST00000560089 MAPK1IP1LQ8NDC0 245 aa13.77□□□□□ -0.2
SEMA4B-215ENST00000560089 SIRPDQ9H106 197 aa13.77□□□□□ -0.21
SEMA4B-215ENST00000560089 IGHV3-16A0A0C4DH30 117 aa13.77□□□□□ -0.21
SEMA4B-215ENST00000560089 LECT2O14960 151 aa13.77□□□□□ -0.21
SEMA4B-215ENST00000560089 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.76□□□□□ -0.21
SEMA4B-215ENST00000560089 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.76□□□□□ -0.21
SEMA4B-215ENST00000560089 IGKV2-29A2NJV5 120 aaPredicted RBP13.76□□□□□ -0.21
SEMA4B-215ENST00000560089 MIR7-3HGQ8N6C7 128 aa13.76□□□□□ -0.21
SEMA4B-215ENST00000560089 PLA2G2AP14555 144 aa13.75□□□□□ -0.21
SEMA4B-215ENST00000560089 CCDC168Q8NDH2 2452 aa13.75□□□□□ -0.21
SEMA4B-215ENST00000560089 ZNF469Q96JG9 3925 aaPredicted RBP13.75□□□□□ -0.21
SEMA4B-215ENST00000560089 ATP6V0E1O15342 81 aa13.74□□□□□ -0.21
SEMA4B-215ENST00000560089 Q8N6K4 173 aa13.74□□□□□ -0.21
SEMA4B-215ENST00000560089 SLPIP03973 132 aa13.74□□□□□ -0.21
SEMA4B-215ENST00000560089 LINC00337Q8N6G1 96 aa13.74□□□□□ -0.21
SEMA4B-215ENST00000560089 SMIM11BQ8TCY0 68 aa13.74□□□□□ -0.21
SEMA4B-215ENST00000560089 IGLV5-45A0A087WSX0 123 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 G3V318 75 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 H0YGX0 51 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 MPLKIPQ8TAP9 179 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 ITPR2Q14571 2701 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 IGLV5-39A0A0G2JS06 123 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 TRBV10-3A0A0K0K1G6 114 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 BLCAPP62952 87 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 COX6A2Q02221 97 aa13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 FASNP49327 2511 aaKnown RBP13.73□□□□□ -0.21
SEMA4B-215ENST00000560089 HECTD1Q9ULT8 2610 aa13.72□□□□□ -0.21
SEMA4B-215ENST00000560089 Q8N9W7 124 aa13.72□□□□□ -0.21
SEMA4B-215ENST00000560089 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.72□□□□□ -0.214e-11■■■■□ 22.8
SEMA4B-215ENST00000560089 IGHV3-73A0A0B4J1V6 119 aa13.72□□□□□ -0.21
SEMA4B-215ENST00000560089 J3QKU1 62 aa13.71□□□□□ -0.21
SEMA4B-215ENST00000560089 BCE1O60756 84 aa13.71□□□□□ -0.21
SEMA4B-215ENST00000560089 CHCHD7Q9BUK0 85 aa13.71□□□□□ -0.21
SEMA4B-215ENST00000560089 ORMDL1Q9P0S3 153 aa13.71□□□□□ -0.22
SEMA4B-215ENST00000560089 CSPG4Q6UVK1 2322 aa13.7□□□□□ -0.22
SEMA4B-215ENST00000560089 UBL5Q9BZL1 73 aa13.7□□□□□ -0.22
SEMA4B-215ENST00000560089 UNQ9165/PRO28630Q6UXU0 137 aa13.7□□□□□ -0.22
SEMA4B-215ENST00000560089 TEX15Q9BXT5 2789 aa13.69□□□□□ -0.22
SEMA4B-215ENST00000560089 ODF3BA8MYP8 253 aa13.69□□□□□ -0.22
SEMA4B-215ENST00000560089 PMAIP1Q13794 54 aa13.69□□□□□ -0.22
SEMA4B-215ENST00000560089 LINC00467Q9BRT7 94 aa13.69□□□□□ -0.22
SEMA4B-215ENST00000560089 RPL36AP83881 106 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-215ENST00000560089 MINOS1Q5TGZ0 78 aa13.68□□□□□ -0.22
SEMA4B-215ENST00000560089 RPL36ALQ969Q0 106 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-215ENST00000560089 ATP5EP56381 51 aaPredicted RBP13.68□□□□□ -0.22
SEMA4B-215ENST00000560089 C6orf226Q5I0X4 101 aa13.68□□□□□ -0.22
SEMA4B-215ENST00000560089 IGKV2-28A0A075B6P5 120 aa13.68□□□□□ -0.22
SEMA4B-215ENST00000560089 IGKV2D-28P01615 120 aa13.68□□□□□ -0.22
SEMA4B-215ENST00000560089 BRD3OSQ6XYD6 125 aa13.68□□□□□ -0.22
SEMA4B-215ENST00000560089 TLN2Q9Y4G6 2542 aa13.67□□□□□ -0.22
SEMA4B-215ENST00000560089 PROK1P58294 105 aa13.67□□□□□ -0.22
SEMA4B-215ENST00000560089 KLK9Q2XQG4 91 aa13.67□□□□□ -0.22
SEMA4B-215ENST00000560089 SND1-IT1Q9HBX3 110 aa13.67□□□□□ -0.22
SEMA4B-215ENST00000560089 SMIM1B2RUZ4 78 aa13.66□□□□□ -0.22
SEMA4B-215ENST00000560089 NDUFC1O43677 76 aa13.66□□□□□ -0.22
SEMA4B-215ENST00000560089 SNRPD3P62318 126 aaKnown RBP13.66□□□□□ -0.22
SEMA4B-215ENST00000560089 DGAT2L7PQ6IED9 249 aa13.66□□□□□ -0.22
SEMA4B-215ENST00000560089 SAA4P35542 130 aa13.65□□□□□ -0.22
SEMA4B-215ENST00000560089 CFHR3Q02985 330 aa13.65□□□□□ -0.22
SEMA4B-215ENST00000560089 FAM229BQ4G0N7 80 aa13.65□□□□□ -0.22
SEMA4B-215ENST00000560089 TRAV10A0A0B4J240 114 aa13.64□□□□□ -0.23
SEMA4B-215ENST00000560089 C11orf72Q8NBR9 251 aa13.64□□□□□ -0.23
SEMA4B-215ENST00000560089 JMJD7-PLA2G4BH0Y9G9 81 aa13.63□□□□□ -0.23
SEMA4B-215ENST00000560089 LINC00242Q5T6M2 205 aa13.63□□□□□ -0.23
SEMA4B-215ENST00000560089 MXRA5Q9NR99 2828 aa13.63□□□□□ -0.23
SEMA4B-215ENST00000560089 UNC79Q9P2D8 2635 aa13.63□□□□□ -0.23
SEMA4B-215ENST00000560089 IGKV3-20P01619 116 aa13.63□□□□□ -0.23
SEMA4B-215ENST00000560089 CREBBPQ92793 2442 aa13.63□□□□□ -0.23
SEMA4B-215ENST00000560089 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
SEMA4B-215ENST00000560089 IGHV4-38-2P0DP08 117 aa13.62□□□□□ -0.23
SEMA4B-215ENST00000560089 Q9UF83 564 aa13.62□□□□□ -0.23
SEMA4B-215ENST00000560089 ITPR3Q14573 2671 aa13.62□□□□□ -0.23
SEMA4B-215ENST00000560089 IGHV3OR16-12A0A075B7B8 117 aa13.61□□□□□ -0.23
SEMA4B-215ENST00000560089 IGHV3-38A0A0C4DH36 116 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms