RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 SORL1Q92673 2214 aa10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 IGLV1-47P01700 117 aa10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 C8orf87E5RJ46 101 aa10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 LY6G6CO95867 125 aa10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 BBC3Q96PG8 261 aaPredicted RBP10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 RAI1Q7Z5J4 1906 aaPredicted RBP10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 ZNF702PQ9H963 129 aa10.22□□□□□ -0.77
CSPG4P12-202ENST00000559989 Q8N3U1 123 aa10.22□□□□□ -0.77
CSPG4P12-202ENST00000559989 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
CSPG4P12-202ENST00000559989 ACYP2P14621 99 aa10.22□□□□□ -0.77
CSPG4P12-202ENST00000559989 MBD6Q96DN6 1003 aa10.21□□□□□ -0.77
CSPG4P12-202ENST00000559989 SBSPONQ8IVN8 264 aa10.21□□□□□ -0.78
CSPG4P12-202ENST00000559989 TNFRSF13BO14836 293 aaPredicted RBP10.21□□□□□ -0.78
CSPG4P12-202ENST00000559989 C2orf91Q6ZV80 131 aa10.21□□□□□ -0.78
CSPG4P12-202ENST00000559989 ODF3BA8MYP8 253 aa10.2□□□□□ -0.78
CSPG4P12-202ENST00000559989 RNASE3P12724 160 aaKnown RBP10.2□□□□□ -0.78
CSPG4P12-202ENST00000559989 LINC00575Q6W349 94 aa10.2□□□□□ -0.78
CSPG4P12-202ENST00000559989 PROK1P58294 105 aa10.2□□□□□ -0.78
CSPG4P12-202ENST00000559989 COL4A1P02462 1669 aa10.2□□□□□ -0.78
CSPG4P12-202ENST00000559989 Q9BRP9 147 aa10.2□□□□□ -0.78
CSPG4P12-202ENST00000559989 U3KQA8 63 aa10.2□□□□□ -0.78
CSPG4P12-202ENST00000559989 CNOT1A5YKK6 2376 aaKnown RBP10.2□□□□□ -0.78
CSPG4P12-202ENST00000559989 Q6YL49 198 aa10.19□□□□□ -0.78
CSPG4P12-202ENST00000559989 Q8N6K4 173 aa10.19□□□□□ -0.78
CSPG4P12-202ENST00000559989 NRGNQ92686 78 aa10.19□□□□□ -0.78
CSPG4P12-202ENST00000559989 IGF2-ASQ6U949 168 aa10.18□□□□□ -0.78
CSPG4P12-202ENST00000559989 FSHBP01225 129 aa10.18□□□□□ -0.78
CSPG4P12-202ENST00000559989 LRP4O75096 1905 aa10.18□□□□□ -0.78
CSPG4P12-202ENST00000559989 C1orf64Q8NEQ6 169 aa10.18□□□□□ -0.78
CSPG4P12-202ENST00000559989 P0C879 139 aa10.18□□□□□ -0.78
CSPG4P12-202ENST00000559989 SHISA2Q6UWI4 295 aa10.18□□□□□ -0.78
CSPG4P12-202ENST00000559989 PCNX3Q9H6A9 2034 aa10.17□□□□□ -0.78
CSPG4P12-202ENST00000559989 EIF4EBP1Q13541 118 aaPredicted RBP10.17□□□□□ -0.78
CSPG4P12-202ENST00000559989 PLA2G2CQ5R387 149 aa10.17□□□□□ -0.78
CSPG4P12-202ENST00000559989 ADORA2A-AS1P86434 159 aa10.16□□□□□ -0.78
CSPG4P12-202ENST00000559989 PTPRSQ13332 1948 aa10.16□□□□□ -0.78
CSPG4P12-202ENST00000559989 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
CSPG4P12-202ENST00000559989 IGLV5-52A0A0A0MRZ9 124 aa10.16□□□□□ -0.78
CSPG4P12-202ENST00000559989 Q6ZS46 218 aa10.16□□□□□ -0.78
CSPG4P12-202ENST00000559989 IGFL2Q6UWQ7 119 aa10.15□□□□□ -0.78
CSPG4P12-202ENST00000559989 Q6ZTC4 211 aa10.15□□□□□ -0.78
CSPG4P12-202ENST00000559989 CACNA1GO43497 2377 aa10.15□□□□□ -0.78
CSPG4P12-202ENST00000559989 MSMPQ1L6U9 139 aa10.15□□□□□ -0.78
CSPG4P12-202ENST00000559989 F8WDY8 70 aa10.15□□□□□ -0.78
CSPG4P12-202ENST00000559989 CRIP1P50238 77 aa10.14□□□□□ -0.79
CSPG4P12-202ENST00000559989 COL5A1P20908 1838 aaPredicted RBP10.14□□□□□ -0.79
CSPG4P12-202ENST00000559989 PIP4P1Q86T03 277 aa10.14□□□□□ -0.79
CSPG4P12-202ENST00000559989 A0A087WVE0 104 aa10.14□□□□□ -0.79
CSPG4P12-202ENST00000559989 A0A087WYN8 130 aa10.14□□□□□ -0.79
CSPG4P12-202ENST00000559989 EGFEM1PQ0D2K5 195 aa10.14□□□□□ -0.79
CSPG4P12-202ENST00000559989 LINC00482Q8N8I6 264 aa10.13□□□□□ -0.79
CSPG4P12-202ENST00000559989 COL4A6Q14031 1691 aa10.13□□□□□ -0.79
CSPG4P12-202ENST00000559989 IGKV2D-30A0A075B6S6 120 aa10.13□□□□□ -0.79
CSPG4P12-202ENST00000559989 IGKV2-30P06310 120 aa10.13□□□□□ -0.79
CSPG4P12-202ENST00000559989 C11orf1Q9H5F2 150 aa10.13□□□□□ -0.79
CSPG4P12-202ENST00000559989 TP53AIP1Q9HCN2 124 aa10.12□□□□□ -0.79
CSPG4P12-202ENST00000559989 CDC42SE2Q9NRR3 84 aa10.12□□□□□ -0.79
CSPG4P12-202ENST00000559989 MED13LQ71F56 2210 aa10.12□□□□□ -0.79
CSPG4P12-202ENST00000559989 LINC00337Q8N6G1 96 aa10.12□□□□□ -0.79
CSPG4P12-202ENST00000559989 CRIP2P52943 208 aaPredicted RBP10.11□□□□□ -0.79
CSPG4P12-202ENST00000559989 LINC01556Q5JQF7 62 aa10.11□□□□□ -0.79
CSPG4P12-202ENST00000559989 MRGPRG-AS1Q2M3A8 158 aa10.1□□□□□ -0.79
CSPG4P12-202ENST00000559989 C2orf48Q96LS8 159 aa10.1□□□□□ -0.79
CSPG4P12-202ENST00000559989 ATP11AUNQ6ZP68 121 aa10.09□□□□□ -0.79
CSPG4P12-202ENST00000559989 THSD7BQ9C0I4 1608 aa10.09□□□□□ -0.79
CSPG4P12-202ENST00000559989 NOTCH4Q99466 2003 aa10.09□□□□□ -0.79
CSPG4P12-202ENST00000559989 A0A087WSZ3 146 aa10.08□□□□□ -0.8
CSPG4P12-202ENST00000559989 C6orf223Q8N319 242 aa10.08□□□□□ -0.8
CSPG4P12-202ENST00000559989 C6orf48Q9UBA6 75 aa10.08□□□□□ -0.8
CSPG4P12-202ENST00000559989 DEFB116Q30KQ4 102 aa10.08□□□□□ -0.8
CSPG4P12-202ENST00000559989 Q9UF83 564 aa10.06□□□□□ -0.8
CSPG4P12-202ENST00000559989 CPAMD8Q8IZJ3 1885 aa10.06□□□□□ -0.8
CSPG4P12-202ENST00000559989 UNQ6190/PRO20217Q6UXQ8 127 aa10.05□□□□□ -0.8
CSPG4P12-202ENST00000559989 LINC00574Q9H8X3 128 aa10.05□□□□□ -0.8
CSPG4P12-202ENST00000559989 PTPRBP23467 1997 aa10.05□□□□□ -0.8
CSPG4P12-202ENST00000559989 TECTAO75443 2155 aa10.05□□□□□ -0.8
CSPG4P12-202ENST00000559989 CHCHD7Q9BUK0 85 aa10.04□□□□□ -0.8
CSPG4P12-202ENST00000559989 POLR2KP53803 58 aaKnown RBP10.04□□□□□ -0.8
CSPG4P12-202ENST00000559989 FSTL3O95633 263 aa10.04□□□□□ -0.8
CSPG4P12-202ENST00000559989 SSBP3-AS1Q7Z2R9 100 aa10.04□□□□□ -0.8
CSPG4P12-202ENST00000559989 INAFM1C9JVW0 142 aa10.03□□□□□ -0.8
CSPG4P12-202ENST00000559989 FBXL19-AS1Q494R0 122 aa10.03□□□□□ -0.8
CSPG4P12-202ENST00000559989 C9orf116Q5BN46 136 aaPredicted RBP10.03□□□□□ -0.8
CSPG4P12-202ENST00000559989 ADAMTS20P59510 1910 aa10.02□□□□□ -0.81
CSPG4P12-202ENST00000559989 KLLNB2CW77 178 aa10.02□□□□□ -0.81
CSPG4P12-202ENST00000559989 SMIM29Q86T20 159 aa10.01□□□□□ -0.81
CSPG4P12-202ENST00000559989 IGLV2-11P01706 119 aa10.01□□□□□ -0.81
CSPG4P12-202ENST00000559989 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
CSPG4P12-202ENST00000559989 PRM2P04554 102 aa10.01□□□□□ -0.81
CSPG4P12-202ENST00000559989 COX6A2Q02221 97 aa10.01□□□□□ -0.81
CSPG4P12-202ENST00000559989 IGIPA6NJ69 53 aa10.01□□□□□ -0.81
CSPG4P12-202ENST00000559989 PSMG3-AS1Q96PY0 264 aa10.01□□□□□ -0.81
CSPG4P12-202ENST00000559989 C4orf26Q17RF5 130 aa10□□□□□ -0.81
CSPG4P12-202ENST00000559989 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
CSPG4P12-202ENST00000559989 CACNA1HO95180 2353 aa10□□□□□ -0.81
CSPG4P12-202ENST00000559989 LMO4P61968 165 aa9.99□□□□□ -0.81
CSPG4P12-202ENST00000559989 H3BPC8 53 aa9.99□□□□□ -0.81
CSPG4P12-202ENST00000559989 Q6ZSV7 163 aa9.99□□□□□ -0.81
CSPG4P12-202ENST00000559989 CSPG4Q6UVK1 2322 aa9.99□□□□□ -0.81
CSPG4P12-202ENST00000559989 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms