RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ERG28Q9UKR5 140 aa5.73□□□□□ -1.49
SMAD3-212ENST00000559937 TEX48A0A1B0GUV7 120 aa5.72□□□□□ -1.49
SMAD3-212ENST00000559937 SMIM1B2RUZ4 78 aa5.72□□□□□ -1.49
SMAD3-212ENST00000559937 PSMB2P49721 201 aa5.72□□□□□ -1.49
SMAD3-212ENST00000559937 HERV-K104P63124 156 aa5.72□□□□□ -1.49
SMAD3-212ENST00000559937 CIRBPQ14011 172 aaKnown RBP5.72□□□□□ -1.49
SMAD3-212ENST00000559937 MDFIQ99750 246 aa5.72□□□□□ -1.49
SMAD3-212ENST00000559937 TRBV6-8A0A0A6YYG3 113 aa5.71□□□□□ -1.5
SMAD3-212ENST00000559937 TRBV30A0A0K0K1B3 111 aa5.71□□□□□ -1.5
SMAD3-212ENST00000559937 LYRM9A8MSI8 78 aa5.71□□□□□ -1.5
SMAD3-212ENST00000559937 F5H768 121 aa5.71□□□□□ -1.5
SMAD3-212ENST00000559937 EIF4EBP3O60516 100 aaPredicted RBP5.71□□□□□ -1.5
SMAD3-212ENST00000559937 COX6A2Q02221 97 aa5.71□□□□□ -1.5
SMAD3-212ENST00000559937 LINC01600Q96MT4 127 aa5.71□□□□□ -1.5
SMAD3-212ENST00000559937 TCL1BO95988 128 aa5.7□□□□□ -1.5
SMAD3-212ENST00000559937 ETDBQ3ZM63 59 aa5.7□□□□□ -1.5
SMAD3-212ENST00000559937 ADAMTSL4-AS1Q5T5F5 129 aa5.7□□□□□ -1.5
SMAD3-212ENST00000559937 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.7□□□□□ -1.5
SMAD3-212ENST00000559937 X6R8D5 127 aa5.7□□□□□ -1.5
SMAD3-212ENST00000559937 CUBNO60494 3623 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 NOTCH3Q9UM47 2321 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 TRAV13-1A0A0B4J241 112 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 PRSS2P07478 247 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 SCGB1C2P0DMR2 95 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 PCP4P48539 62 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 SMCPP49901 116 aaPredicted RBP5.69□□□□□ -1.5
SMAD3-212ENST00000559937 APOC4P55056 127 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 ZNF625Q96I27 306 aaPredicted RBP5.69□□□□□ -1.5
SMAD3-212ENST00000559937 CITED1Q99966 193 aa5.69□□□□□ -1.5
SMAD3-212ENST00000559937 A8MZ25 164 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 WIPF1O43516 503 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 ATXN8Q156A1 80 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 Q1RN00 199 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 SFTA2Q6UW10 78 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 SH2D6Q7Z4S9 175 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 TEN1Q86WV5 123 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 SPATA3Q8NHX4 192 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 LINC00308Q8TCZ7 52 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 PPDPFLQ8WWR9 84 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 Q9H8V8 135 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 PRO0255Q9UI72 69 aa5.68□□□□□ -1.5
SMAD3-212ENST00000559937 A0A1B0GUV1 79 aa5.67□□□□□ -1.5
SMAD3-212ENST00000559937 COX6CP09669 75 aa5.67□□□□□ -1.5
SMAD3-212ENST00000559937 FOXI1Q12951 378 aa5.67□□□□□ -1.5
SMAD3-212ENST00000559937 GAGE6Q13070 117 aa5.67□□□□□ -1.5
SMAD3-212ENST00000559937 LINC01561Q8N1V8 128 aa5.67□□□□□ -1.5
SMAD3-212ENST00000559937 SPATA25Q9BR10 227 aa5.67□□□□□ -1.5
SMAD3-212ENST00000559937 CHCHD5Q9BSY4 110 aa5.67□□□□□ -1.5
SMAD3-212ENST00000559937 ICOSQ9Y6W8 199 aa5.67□□□□□ -1.5
SMAD3-212ENST00000559937 TRIAP1O43715 76 aa5.66□□□□□ -1.5
SMAD3-212ENST00000559937 SLC25A20O43772 301 aa5.66□□□□□ -1.5
SMAD3-212ENST00000559937 GYPEP15421 78 aa5.66□□□□□ -1.5
SMAD3-212ENST00000559937 LINC01620Q4KN68 170 aa5.66□□□□□ -1.5
SMAD3-212ENST00000559937 COX7B2Q8TF08 81 aa5.66□□□□□ -1.5
SMAD3-212ENST00000559937 IGLV4-60A0A075B6I1 120 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 TRAV26-1A0A087WT03 109 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 A0A087WZ39 114 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 IGHV3OR16-9A0A0B4J2B5 98 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 DEFB130BP0DP73 79 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 DEFB130AP0DP74 79 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 MIFP14174 115 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 RPL13AP40429 203 aaKnown RBP5.65□□□□□ -1.5
SMAD3-212ENST00000559937 MEIG1Q5JSS6 88 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 FAM222AQ5U5X8 452 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 MTURNQ8N3F0 131 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 WFDC9Q8NEX5 89 aa5.65□□□□□ -1.5
SMAD3-212ENST00000559937 MGAM2Q2M2H8 2515 aa5.65□□□□□ -1.51
SMAD3-212ENST00000559937 TENM1Q9UKZ4 2725 aa5.64□□□□□ -1.51
SMAD3-212ENST00000559937 TRBV10-2A0A0K0K1G8 114 aa5.64□□□□□ -1.51
SMAD3-212ENST00000559937 LINC00959A0A1B0GUT2 108 aa5.64□□□□□ -1.51
SMAD3-212ENST00000559937 GAGE12HA6NDE8 117 aa5.64□□□□□ -1.51
SMAD3-212ENST00000559937 C9JAW5 83 aa5.64□□□□□ -1.51
SMAD3-212ENST00000559937 H3BT86 120 aa5.64□□□□□ -1.51
SMAD3-212ENST00000559937 H7C2G1 150 aa5.64□□□□□ -1.51
SMAD3-212ENST00000559937 SCGB1A1P11684 91 aa5.64□□□□□ -1.51
SMAD3-212ENST00000559937 IBA57-AS1B1ANH7 110 aa5.63□□□□□ -1.51
SMAD3-212ENST00000559937 LST1O00453 97 aa5.63□□□□□ -1.51
SMAD3-212ENST00000559937 PAX4O43316 350 aa5.63□□□□□ -1.51
SMAD3-212ENST00000559937 NPC2P61916 151 aa5.63□□□□□ -1.51
SMAD3-212ENST00000559937 SS18Q15532 418 aa5.63□□□□□ -1.51
SMAD3-212ENST00000559937 ANKRD29Q8N6D5 301 aa5.63□□□□□ -1.51
SMAD3-212ENST00000559937 SIGMAR1Q99720 223 aa5.63□□□□□ -1.51
SMAD3-212ENST00000559937 TRAV13-2A0A0B4J235 113 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 IGHV4-28A0A0C4DH34 117 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 ATP5G1P05496 136 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 DAD1P61803 113 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 DEFB135Q30KP9 77 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 SHISA2Q6UWI4 295 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 SOSTDC1Q6X4U4 206 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 DAND5Q8N907 189 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 Q8NAQ8 132 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 CARD19Q96LW7 228 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 ANK2Q01484 3957 aa5.62□□□□□ -1.51
SMAD3-212ENST00000559937 TMEM262E9PQX1 116 aa5.61□□□□□ -1.51
SMAD3-212ENST00000559937 COX7A2LO14548 114 aa5.61□□□□□ -1.51
SMAD3-212ENST00000559937 SPART-AS1P0CW21 52 aa5.61□□□□□ -1.51
SMAD3-212ENST00000559937 KRTAP24-1Q3LI83 254 aa5.61□□□□□ -1.51
SMAD3-212ENST00000559937 Q8IZM0 81 aa5.61□□□□□ -1.51
SMAD3-212ENST00000559937 CXCL5P42830 114 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms